RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 PUS7Q96PZ0 661 aaKnown RBP28.09■■■□□ 2.09
TMEM53-207ENST00000468117 KNSTRNQ9Y448 316 aa28.09■■■□□ 2.09
TMEM53-207ENST00000468117 CC2D1BQ5T0F9 858 aaKnown RBP28.08■■■□□ 2.09
TMEM53-207ENST00000468117 DIP2AQ14689 1571 aa28.08■■■□□ 2.09
TMEM53-207ENST00000468117 CENPBP07199 599 aaPredicted RBP28.08■■■□□ 2.08
TMEM53-207ENST00000468117 SRPK2P78362 688 aaKnown RBP28.08■■■□□ 2.08
TMEM53-207ENST00000468117 RALBP1Q15311 655 aa28.08■■■□□ 2.08
TMEM53-207ENST00000468117 SLC12A5Q9H2X9 1139 aa28.08■■■□□ 2.08
TMEM53-207ENST00000468117 TBX22Q9Y458 520 aa28.08■■■□□ 2.08
TMEM53-207ENST00000468117 MRS2Q9HD23 443 aa28.07■■■□□ 2.08
TMEM53-207ENST00000468117 FAM135BQ49AJ0 1406 aa28.07■■■□□ 2.08
TMEM53-207ENST00000468117 ANKLE2Q86XL3 938 aa28.06■■■□□ 2.08
TMEM53-207ENST00000468117 PTPRUQ92729 1446 aa28.06■■■□□ 2.08
TMEM53-207ENST00000468117 PARD3Q8TEW0 1356 aa28.06■■■□□ 2.08
TMEM53-207ENST00000468117 SIRT1Q96EB6 747 aa28.05■■■□□ 2.08
TMEM53-207ENST00000468117 ROBO2Q9HCK4 1378 aa28.04■■■□□ 2.08
TMEM53-207ENST00000468117 CARD14Q9BXL6 1004 aa28.03■■■□□ 2.08
TMEM53-207ENST00000468117 AMER1Q5JTC6 1135 aaPredicted RBP28.02■■■□□ 2.08
TMEM53-207ENST00000468117 CDK19Q9BWU1 502 aa28.02■■■□□ 2.08
TMEM53-207ENST00000468117 MYBBP1AQ9BQG0 1328 aaKnown RBP28.02■■■□□ 2.08
TMEM53-207ENST00000468117 AMOTL2Q9Y2J4 779 aa28■■■□□ 2.07
TMEM53-207ENST00000468117 ATAD2Q6PL18 1390 aa27.99■■■□□ 2.07
TMEM53-207ENST00000468117 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.96■■■□□ 2.07
TMEM53-207ENST00000468117 XRN1Q8IZH2 1706 aaKnown RBP27.96■■■□□ 2.07
TMEM53-207ENST00000468117 NSD3Q9BZ95 1437 aa27.95■■■□□ 2.06
TMEM53-207ENST00000468117 WASLO00401 505 aaPredicted RBP27.94■■■□□ 2.06
TMEM53-207ENST00000468117 ANKRD36BQ8N2N9 1353 aa27.94■■■□□ 2.06
TMEM53-207ENST00000468117 NPC1L1Q9UHC9 1359 aa27.94■■■□□ 2.06
TMEM53-207ENST00000468117 NINLQ9Y2I6 1382 aa27.94■■■□□ 2.06
TMEM53-207ENST00000468117 KDM4FA0A1W2PPD8 638 aa27.94■■■□□ 2.06
TMEM53-207ENST00000468117 FAM9BQ8IZU0 186 aa27.94■■■□□ 2.06
TMEM53-207ENST00000468117 PTCH1Q13635 1447 aa27.92■■■□□ 2.06
TMEM53-207ENST00000468117 BRD4O60885 1362 aaPredicted RBP27.92■■■□□ 2.06
TMEM53-207ENST00000468117 CHD2O14647 1828 aaKnown RBP27.91■■■□□ 2.06
TMEM53-207ENST00000468117 PIK3R4Q99570 1358 aa27.91■■■□□ 2.06
TMEM53-207ENST00000468117 NLRP13Q86W25 1043 aa27.91■■■□□ 2.06
TMEM53-207ENST00000468117 NPHP4O75161 1426 aaPredicted RBP27.9■■■□□ 2.06
TMEM53-207ENST00000468117 ADGRB2O60241 1585 aa27.9■■■□□ 2.06
TMEM53-207ENST00000468117 A0A1W2PP64 1363 aa27.9■■■□□ 2.06
TMEM53-207ENST00000468117 USP32Q8NFA0 1604 aa27.89■■■□□ 2.05
TMEM53-207ENST00000468117 NCKAP5LQ9HCH0 1330 aa27.88■■■□□ 2.05
TMEM53-207ENST00000468117 CABP1Q9NZU7 370 aa27.88■■■□□ 2.05
TMEM53-207ENST00000468117 CD163L1Q9NR16 1453 aa27.88■■■□□ 2.05
TMEM53-207ENST00000468117 KCNA6P17658 529 aa27.87■■■□□ 2.05
TMEM53-207ENST00000468117 TERF2IPQ9NYB0 399 aa27.85■■■□□ 2.05
TMEM53-207ENST00000468117 PNISRQ8TF01 805 aaKnown RBP27.84■■■□□ 2.05
TMEM53-207ENST00000468117 PPP2R1AP30153 589 aa27.83■■■□□ 2.05
TMEM53-207ENST00000468117 NUDT16Q96DE0 195 aaKnown RBP27.82■■■□□ 2.04
TMEM53-207ENST00000468117 CGNL1Q0VF96 1302 aa27.82■■■□□ 2.04
TMEM53-207ENST00000468117 PPIP5K1Q6PFW1 1433 aa27.81■■■□□ 2.04
TMEM53-207ENST00000468117 ATP7BP35670 1465 aa27.81■■■□□ 2.04
TMEM53-207ENST00000468117 HNRNPUQ00839 825 aaKnown RBP eCLIP27.8■■■□□ 2.04
TMEM53-207ENST00000468117 HDGFL2Q7Z4V5 671 aaPredicted RBP27.8■■■□□ 2.04
TMEM53-207ENST00000468117 PRR36Q9H6K5 1346 aa27.79■■■□□ 2.04
TMEM53-207ENST00000468117 CCDC61Q9Y6R9 512 aa27.78■■■□□ 2.04
TMEM53-207ENST00000468117 NUTM2FA1L443 756 aa27.76■■■□□ 2.03
TMEM53-207ENST00000468117 HSPA2P54652 639 aa27.76■■■□□ 2.03
TMEM53-207ENST00000468117 TOPAZ1Q8N9V7 1692 aa27.75■■■□□ 2.03
TMEM53-207ENST00000468117 MORC1Q86VD1 984 aa27.75■■■□□ 2.03
TMEM53-207ENST00000468117 ITSN1Q15811 1721 aa27.74■■■□□ 2.03
TMEM53-207ENST00000468117 RGPD8O14715 1765 aaPredicted RBP27.73■■■□□ 2.03
TMEM53-207ENST00000468117 CDC42BPGQ6DT37 1551 aa27.73■■■□□ 2.03
TMEM53-207ENST00000468117 NSD2O96028 1365 aa27.73■■■□□ 2.03
TMEM53-207ENST00000468117 AKAP12Q02952 1782 aa27.72■■■□□ 2.03
TMEM53-207ENST00000468117 CPSF1Q10570 1443 aaKnown RBP27.72■■■□□ 2.03
TMEM53-207ENST00000468117 NALCNQ8IZF0 1738 aa27.72■■■□□ 2.03
TMEM53-207ENST00000468117 KIF20BQ96Q89 1820 aa27.72■■■□□ 2.03
TMEM53-207ENST00000468117 LMTK3Q96Q04 1460 aa27.71■■■□□ 2.03
TMEM53-207ENST00000468117 ANKRD26Q9UPS8 1709 aa27.71■■■□□ 2.03
TMEM53-207ENST00000468117 TNNT2P45379 298 aaPredicted RBP27.71■■■□□ 2.03
TMEM53-207ENST00000468117 MON2Q7Z3U7 1717 aa27.7■■■□□ 2.03
TMEM53-207ENST00000468117 RBM33Q96EV2 1170 aaKnown RBP27.7■■■□□ 2.02
TMEM53-207ENST00000468117 NWD1Q149M9 1564 aa27.69■■■□□ 2.02
TMEM53-207ENST00000468117 FYB1O15117 783 aa27.68■■■□□ 2.02
TMEM53-207ENST00000468117 GGNBP2Q9H3C7 697 aa27.68■■■□□ 2.02
TMEM53-207ENST00000468117 FMN2Q9NZ56 1722 aa27.67■■■□□ 2.02
TMEM53-207ENST00000468117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.66■■■□□ 2.02
TMEM53-207ENST00000468117 NKTRP30414 1462 aaKnown RBP27.65■■■□□ 2.02
TMEM53-207ENST00000468117 EDC4Q6P2E9 1401 aaKnown RBP27.64■■■□□ 2.02
TMEM53-207ENST00000468117 PLEKHG3A1L390 1219 aa27.62■■■□□ 2.01
TMEM53-207ENST00000468117 ACEP12821 1306 aa27.62■■■□□ 2.01
TMEM53-207ENST00000468117 STRCQ7RTU9 1775 aa27.62■■■□□ 2.01
TMEM53-207ENST00000468117 ZNF692Q9BU19 519 aaPredicted RBP27.61■■■□□ 2.01
TMEM53-207ENST00000468117 ADGRL3Q9HAR2 1447 aa27.6■■■□□ 2.01
TMEM53-207ENST00000468117 STRCP1A6NGW2 1772 aa27.59■■■□□ 2.01
TMEM53-207ENST00000468117 ANKARQ7Z5J8 1434 aa27.59■■■□□ 2.01
TMEM53-207ENST00000468117 ZBED9Q6R2W3 1325 aa27.59■■■□□ 2.01
TMEM53-207ENST00000468117 SENP3-EIF4A1A0A087X0R7 540 aa27.58■■■□□ 2.01
TMEM53-207ENST00000468117 PMFBP1Q8TBY8 1022 aa27.58■■■□□ 2.01
TMEM53-207ENST00000468117 NRKQ7Z2Y5 1582 aa27.57■■■□□ 2
TMEM53-207ENST00000468117 C14orf37Q86TY3 774 aa27.57■■■□□ 2
TMEM53-207ENST00000468117 POLR3AO14802 1390 aaPredicted RBP27.56■■■□□ 2
TMEM53-207ENST00000468117 MTHFSP49914 203 aa27.56■■■□□ 2
TMEM53-207ENST00000468117 WDR43Q15061 677 aaKnown RBP eCLIP27.56■■■□□ 2
TMEM53-207ENST00000468117 NME9Q86XW9 330 aa27.56■■■□□ 2
TMEM53-207ENST00000468117 ADAMTS8Q9UP79 889 aa27.56■■■□□ 2
TMEM53-207ENST00000468117 PROSER2Q86WR7 435 aaPredicted RBP27.55■■■□□ 2
TMEM53-207ENST00000468117 USP6P35125 1406 aa27.54■■■□□ 2
TMEM53-207ENST00000468117 BLMP54132 1417 aaPredicted RBP27.52■■■□□ 2
TMEM53-207ENST00000468117 SHPRHQ149N8 1683 aa27.51■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms