RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 CARD14Q9BXL6 1004 aa25.54■■□□□ 1.68
CHRNA4-203ENST00000467563 SLC12A5Q9H2X9 1139 aa25.54■■□□□ 1.68
CHRNA4-203ENST00000467563 CABP2Q9NPB3 220 aa25.54■■□□□ 1.68
CHRNA4-203ENST00000467563 PLEKHH1Q9ULM0 1364 aa25.54■■□□□ 1.68
CHRNA4-203ENST00000467563 TMC1Q8TDI8 760 aa25.53■■□□□ 1.68
CHRNA4-203ENST00000467563 BRD4O60885 1362 aaPredicted RBP25.52■■□□□ 1.68
CHRNA4-203ENST00000467563 MED14O60244 1454 aa25.52■■□□□ 1.68
CHRNA4-203ENST00000467563 TECPR2O15040 1411 aa25.51■■□□□ 1.67
CHRNA4-203ENST00000467563 NLRP13Q86W25 1043 aa25.5■■□□□ 1.67
CHRNA4-203ENST00000467563 NPC1L1Q9UHC9 1359 aa25.5■■□□□ 1.67
CHRNA4-203ENST00000467563 SRPK2P78362 688 aaKnown RBP25.49■■□□□ 1.67
CHRNA4-203ENST00000467563 KNDC1Q76NI1 1749 aa25.49■■□□□ 1.67
CHRNA4-203ENST00000467563 SLC26A8Q96RN1 970 aa25.49■■□□□ 1.67
CHRNA4-203ENST00000467563 HNRNPUQ00839 825 aaKnown RBP eCLIP25.48■■□□□ 1.67
CHRNA4-203ENST00000467563 PNISRQ8TF01 805 aaKnown RBP25.47■■□□□ 1.67
CHRNA4-203ENST00000467563 FAM135BQ49AJ0 1406 aa25.47■■□□□ 1.67
CHRNA4-203ENST00000467563 CPS1P31327 1500 aa25.47■■□□□ 1.67
CHRNA4-203ENST00000467563 SIRT1Q96EB6 747 aa25.46■■□□□ 1.67
CHRNA4-203ENST00000467563 ZNF142P52746 1687 aaPredicted RBP25.45■■□□□ 1.67
CHRNA4-203ENST00000467563 CDK19Q9BWU1 502 aa25.45■■□□□ 1.66
CHRNA4-203ENST00000467563 NSD3Q9BZ95 1437 aa25.44■■□□□ 1.66
CHRNA4-203ENST00000467563 ATAD2Q6PL18 1390 aa25.43■■□□□ 1.66
CHRNA4-203ENST00000467563 ROBO2Q9HCK4 1378 aa25.43■■□□□ 1.66
CHRNA4-203ENST00000467563 PTPRUQ92729 1446 aa25.43■■□□□ 1.66
CHRNA4-203ENST00000467563 SETD1BQ9UPS6 1966 aaKnown RBP25.43■■□□□ 1.66
CHRNA4-203ENST00000467563 TBX22Q9Y458 520 aa25.43■■□□□ 1.66
CHRNA4-203ENST00000467563 SCAF1Q9H7N4 1312 aaKnown RBP25.42■■□□□ 1.66
CHRNA4-203ENST00000467563 ANKRD36BQ8N2N9 1353 aa25.42■■□□□ 1.66
CHRNA4-203ENST00000467563 NINLQ9Y2I6 1382 aa25.41■■□□□ 1.66
CHRNA4-203ENST00000467563 PPP2R1AP30153 589 aa25.39■■□□□ 1.65
CHRNA4-203ENST00000467563 DIP2AQ14689 1571 aa25.38■■□□□ 1.65
CHRNA4-203ENST00000467563 A0A1W2PP64 1363 aa25.37■■□□□ 1.65
CHRNA4-203ENST00000467563 WASLO00401 505 aaPredicted RBP25.36■■□□□ 1.65
CHRNA4-203ENST00000467563 GTF3C3Q9Y5Q9 886 aa25.36■■□□□ 1.65
CHRNA4-203ENST00000467563 ANKLE2Q86XL3 938 aa25.35■■□□□ 1.65
CHRNA4-203ENST00000467563 AMOTL2Q9Y2J4 779 aa25.35■■□□□ 1.65
CHRNA4-203ENST00000467563 CD163L1Q9NR16 1453 aa25.35■■□□□ 1.65
CHRNA4-203ENST00000467563 USP32Q8NFA0 1604 aa25.35■■□□□ 1.65
CHRNA4-203ENST00000467563 CABP1Q9NZU7 370 aa25.33■■□□□ 1.65
CHRNA4-203ENST00000467563 CGNL1Q0VF96 1302 aa25.32■■□□□ 1.64
CHRNA4-203ENST00000467563 TERF2IPQ9NYB0 399 aa25.31■■□□□ 1.64
CHRNA4-203ENST00000467563 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.31■■□□□ 1.64
CHRNA4-203ENST00000467563 PTCH1Q13635 1447 aa25.3■■□□□ 1.64
CHRNA4-203ENST00000467563 ZBED9Q6R2W3 1325 aa25.28■■□□□ 1.64
CHRNA4-203ENST00000467563 XRN1Q8IZH2 1706 aaKnown RBP25.27■■□□□ 1.64
CHRNA4-203ENST00000467563 ADGRB2O60241 1585 aa25.27■■□□□ 1.64
CHRNA4-203ENST00000467563 MORC1Q86VD1 984 aa25.27■■□□□ 1.64
CHRNA4-203ENST00000467563 PIK3R4Q99570 1358 aa25.26■■□□□ 1.63
CHRNA4-203ENST00000467563 HDGFL2Q7Z4V5 671 aaPredicted RBP25.25■■□□□ 1.63
CHRNA4-203ENST00000467563 NUDT16Q96DE0 195 aaKnown RBP25.25■■□□□ 1.63
CHRNA4-203ENST00000467563 NSD2O96028 1365 aa25.25■■□□□ 1.63
CHRNA4-203ENST00000467563 ATP7BP35670 1465 aa25.25■■□□□ 1.63
CHRNA4-203ENST00000467563 PPIP5K1Q6PFW1 1433 aa25.24■■□□□ 1.63
CHRNA4-203ENST00000467563 KCNA6P17658 529 aa25.24■■□□□ 1.63
CHRNA4-203ENST00000467563 PRR36Q9H6K5 1346 aa25.23■■□□□ 1.63
CHRNA4-203ENST00000467563 NCKAP5LQ9HCH0 1330 aa25.23■■□□□ 1.63
CHRNA4-203ENST00000467563 CCDC61Q9Y6R9 512 aa25.22■■□□□ 1.63
CHRNA4-203ENST00000467563 TNNT2P45379 298 aaPredicted RBP25.21■■□□□ 1.63
CHRNA4-203ENST00000467563 SENP3-EIF4A1A0A087X0R7 540 aa25.2■■□□□ 1.62
CHRNA4-203ENST00000467563 NPHP4O75161 1426 aaPredicted RBP25.2■■□□□ 1.62
CHRNA4-203ENST00000467563 CPSF1Q10570 1443 aaKnown RBP25.2■■□□□ 1.62
CHRNA4-203ENST00000467563 FYB1O15117 783 aa25.19■■□□□ 1.62
CHRNA4-203ENST00000467563 GGNBP2Q9H3C7 697 aa25.18■■□□□ 1.62
CHRNA4-203ENST00000467563 INSRP06213 1382 aa25.18■■□□□ 1.62
CHRNA4-203ENST00000467563 ADAMTS8Q9UP79 889 aa25.17■■□□□ 1.62
CHRNA4-203ENST00000467563 CDC42BPGQ6DT37 1551 aa25.16■■□□□ 1.62
CHRNA4-203ENST00000467563 BLMP54132 1417 aaPredicted RBP25.16■■□□□ 1.62
CHRNA4-203ENST00000467563 CHD2O14647 1828 aaKnown RBP25.16■■□□□ 1.62
CHRNA4-203ENST00000467563 NUTM2FA1L443 756 aa25.14■■□□□ 1.62
CHRNA4-203ENST00000467563 POLR3AO14802 1390 aaPredicted RBP25.14■■□□□ 1.61
CHRNA4-203ENST00000467563 WDR43Q15061 677 aaKnown RBP eCLIP25.14■■□□□ 1.61
CHRNA4-203ENST00000467563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.13■■□□□ 1.61
CHRNA4-203ENST00000467563 TOPAZ1Q8N9V7 1692 aa25.12■■□□□ 1.61
CHRNA4-203ENST00000467563 EDC4Q6P2E9 1401 aaKnown RBP25.12■■□□□ 1.61
CHRNA4-203ENST00000467563 ANKRD26Q9UPS8 1709 aa25.12■■□□□ 1.61
CHRNA4-203ENST00000467563 KDM4FA0A1W2PPD8 638 aa25.11■■□□□ 1.61
CHRNA4-203ENST00000467563 MTHFSP49914 203 aa25.11■■□□□ 1.61
CHRNA4-203ENST00000467563 KIF20BQ96Q89 1820 aa25.1■■□□□ 1.61
CHRNA4-203ENST00000467563 PLEKHG3A1L390 1219 aa25.09■■□□□ 1.61
CHRNA4-203ENST00000467563 MON2Q7Z3U7 1717 aa25.08■■□□□ 1.61
CHRNA4-203ENST00000467563 AKAP12Q02952 1782 aa25.08■■□□□ 1.61
CHRNA4-203ENST00000467563 NKTRP30414 1462 aaKnown RBP25.08■■□□□ 1.61
CHRNA4-203ENST00000467563 ZNF692Q9BU19 519 aaPredicted RBP25.07■■□□□ 1.6
CHRNA4-203ENST00000467563 ITSN1Q15811 1721 aa25.07■■□□□ 1.6
CHRNA4-203ENST00000467563 ACEP12821 1306 aa25.06■■□□□ 1.6
CHRNA4-203ENST00000467563 RBM33Q96EV2 1170 aaKnown RBP25.05■■□□□ 1.6
CHRNA4-203ENST00000467563 SALL2Q9Y467 1007 aaPredicted RBP25.05■■□□□ 1.6
CHRNA4-203ENST00000467563 NME9Q86XW9 330 aa25.04■■□□□ 1.6
CHRNA4-203ENST00000467563 SHPRHQ149N8 1683 aa25.03■■□□□ 1.6
CHRNA4-203ENST00000467563 NALCNQ8IZF0 1738 aa25.02■■□□□ 1.6
CHRNA4-203ENST00000467563 HSPA2P54652 639 aa25.01■■□□□ 1.59
CHRNA4-203ENST00000467563 CFAP53Q96M91 514 aa25.01■■□□□ 1.59
CHRNA4-203ENST00000467563 ZRANB1Q9UGI0 708 aa25.01■■□□□ 1.59
CHRNA4-203ENST00000467563 ANKARQ7Z5J8 1434 aa25■■□□□ 1.59
CHRNA4-203ENST00000467563 RGPD8O14715 1765 aaPredicted RBP25■■□□□ 1.59
CHRNA4-203ENST00000467563 FMN2Q9NZ56 1722 aa25■■□□□ 1.59
CHRNA4-203ENST00000467563 NWD1Q149M9 1564 aa25■■□□□ 1.59
CHRNA4-203ENST00000467563 USP6P35125 1406 aa25■■□□□ 1.59
CHRNA4-203ENST00000467563 SMG6Q86US8 1419 aaKnown RBP25■■□□□ 1.59
CHRNA4-203ENST00000467563 PMFBP1Q8TBY8 1022 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms