RNA–Protein interactions for RNA: ENST00000467141.1

MSL3-209, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-209ENST00000467141 KMT5BQ4FZB7 885 aa7.45□□□□□ -1.22
MSL3-209ENST00000467141 KRTAP4-12Q9BQ66 201 aa7.45□□□□□ -1.22
MSL3-209ENST00000467141 ZBTB24O43167 697 aaPredicted RBP7.43□□□□□ -1.22
MSL3-209ENST00000467141 MRGPRX2Q96LB1 330 aa7.43□□□□□ -1.22
MSL3-209ENST00000467141 SPSB2Q99619 263 aa7.43□□□□□ -1.22
MSL3-209ENST00000467141 BAZ1AQ9NRL2 1556 aaPredicted RBP7.42□□□□□ -1.22
MSL3-209ENST00000467141 VSIG8P0DPA2 414 aa7.42□□□□□ -1.22
MSL3-209ENST00000467141 TRIM46Q7Z4K8 759 aa7.42□□□□□ -1.22
MSL3-209ENST00000467141 HMGXB3Q12766 1538 aa7.42□□□□□ -1.22
MSL3-209ENST00000467141 PEG3Q9GZU2 1588 aa7.42□□□□□ -1.22
MSL3-209ENST00000467141 MSTNO14793 375 aa7.41□□□□□ -1.22
MSL3-209ENST00000467141 SCUBE3Q8IX30 993 aa7.41□□□□□ -1.22
MSL3-209ENST00000467141 RTN4Q9NQC3 1192 aaKnown RBP7.41□□□□□ -1.22
MSL3-209ENST00000467141 NCAPD3P42695 1498 aa7.41□□□□□ -1.22
MSL3-209ENST00000467141 ATAD2BQ9ULI0 1458 aa7.41□□□□□ -1.22
MSL3-209ENST00000467141 SMARCA2P51531 1590 aa7.41□□□□□ -1.22
MSL3-209ENST00000467141 GTPBP6O43824 516 aaPredicted RBP7.38□□□□□ -1.23
MSL3-209ENST00000467141 KANK3Q6NY19 840 aa7.38□□□□□ -1.23
MSL3-209ENST00000467141 CFHP08603 1231 aa7.37□□□□□ -1.23
MSL3-209ENST00000467141 MROH2BQ7Z745 1585 aa7.37□□□□□ -1.23
MSL3-209ENST00000467141 RBM27Q9P2N5 1060 aaKnown RBP7.36□□□□□ -1.23
MSL3-209ENST00000467141 ZFP42Q96MM3 310 aa7.35□□□□□ -1.23
MSL3-209ENST00000467141 WIZO95785 1651 aa7.35□□□□□ -1.23
MSL3-209ENST00000467141 CAPN5O15484 640 aaPredicted RBP7.34□□□□□ -1.23
MSL3-209ENST00000467141 BBXQ8WY36 941 aaPredicted RBP7.34□□□□□ -1.23
MSL3-209ENST00000467141 CDHR5Q9HBB8 845 aa7.34□□□□□ -1.23
MSL3-209ENST00000467141 BAZ1BQ9UIG0 1483 aaKnown RBP7.34□□□□□ -1.23
MSL3-209ENST00000467141 KIF21AQ7Z4S6 1674 aa7.34□□□□□ -1.23
MSL3-209ENST00000467141 K7ELQ4 463 aaPredicted RBP7.33□□□□□ -1.24
MSL3-209ENST00000467141 PRIM1P49642 420 aaKnown RBP7.33□□□□□ -1.24
MSL3-209ENST00000467141 MARSP56192 900 aaKnown RBP7.33□□□□□ -1.24
MSL3-209ENST00000467141 PADI6Q6TGC4 694 aa7.33□□□□□ -1.24
MSL3-209ENST00000467141 EYA1Q99502 592 aa7.33□□□□□ -1.24
MSL3-209ENST00000467141 SPOCK3Q9BQ16 436 aa7.33□□□□□ -1.24
MSL3-209ENST00000467141 PUS10Q3MIT2 529 aaKnown RBP7.32□□□□□ -1.24
MSL3-209ENST00000467141 SVOPQ8N4V2 548 aa7.32□□□□□ -1.24
MSL3-209ENST00000467141 SOBPA7XYQ1 873 aa7.31□□□□□ -1.24
MSL3-209ENST00000467141 CNTNAP3BQ96NU0 1288 aa7.31□□□□□ -1.24
MSL3-209ENST00000467141 REPIN1Q9BWE0 567 aaKnown RBP7.31□□□□□ -1.24
MSL3-209ENST00000467141 CNTNAP3Q9BZ76 1288 aa7.31□□□□□ -1.24
MSL3-209ENST00000467141 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.31□□□□□ -1.24
MSL3-209ENST00000467141 NESP48681 1621 aa7.3□□□□□ -1.24
MSL3-209ENST00000467141 THOC2Q8NI27 1593 aaKnown RBP7.3□□□□□ -1.24
MSL3-209ENST00000467141 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
MSL3-209ENST00000467141 TTC13Q8NBP0 860 aa7.3□□□□□ -1.24
MSL3-209ENST00000467141 GALNT6Q8NCL4 622 aa7.3□□□□□ -1.24
MSL3-209ENST00000467141 LAMC3Q9Y6N6 1575 aa7.29□□□□□ -1.24
MSL3-209ENST00000467141 ALDH1A1P00352 501 aa7.29□□□□□ -1.24
MSL3-209ENST00000467141 TRIM32Q13049 653 aa7.29□□□□□ -1.24
MSL3-209ENST00000467141 CAMK2BQ13554 666 aa7.28□□□□□ -1.24
MSL3-209ENST00000467141 ZNF385CQ66K41 422 aaPredicted RBP7.28□□□□□ -1.24
MSL3-209ENST00000467141 SCARF2Q96GP6 870 aaPredicted RBP7.28□□□□□ -1.24
MSL3-209ENST00000467141 PRDM2Q13029 1718 aa7.27□□□□□ -1.25
MSL3-209ENST00000467141 KRT76Q01546 638 aa7.27□□□□□ -1.25
MSL3-209ENST00000467141 SPRYD3Q8NCJ5 442 aa7.27□□□□□ -1.25
MSL3-209ENST00000467141 ERCC6Q03468 1493 aa7.27□□□□□ -1.25
MSL3-209ENST00000467141 CUX2O14529 1486 aa7.26□□□□□ -1.25
MSL3-209ENST00000467141 GRXCR2A6NFK2 248 aa7.26□□□□□ -1.25
MSL3-209ENST00000467141 DNAJB2P25686 324 aa7.25□□□□□ -1.25
MSL3-209ENST00000467141 KRTAP4-7Q9BYR0 210 aa7.25□□□□□ -1.25
MSL3-209ENST00000467141 RC3H1Q5TC82 1133 aaKnown RBP7.24□□□□□ -1.25
MSL3-209ENST00000467141 FAM160A2Q8N612 972 aaPredicted RBP7.24□□□□□ -1.25
MSL3-209ENST00000467141 CFAP44Q96MT7 982 aa7.24□□□□□ -1.25
MSL3-209ENST00000467141 PRDM9Q9NQV7 894 aa7.24□□□□□ -1.25
MSL3-209ENST00000467141 PPFIA3O75145 1194 aa7.23□□□□□ -1.25
MSL3-209ENST00000467141 SLC10A3P09131 477 aa7.23□□□□□ -1.25
MSL3-209ENST00000467141 PAXIP1Q6ZW49 1069 aaPredicted RBP7.23□□□□□ -1.25
MSL3-209ENST00000467141 PROCP04070 461 aa7.22□□□□□ -1.25
MSL3-209ENST00000467141 CADPS2Q86UW7 1296 aa7.22□□□□□ -1.25
MSL3-209ENST00000467141 WHAMMQ8TF30 809 aa7.22□□□□□ -1.25
MSL3-209ENST00000467141 TOP2AP11388 1531 aaKnown RBP7.22□□□□□ -1.25
MSL3-209ENST00000467141 ARHGEF15O94989 841 aa7.21□□□□□ -1.26
MSL3-209ENST00000467141 PDIA6Q15084 440 aa7.21□□□□□ -1.26
MSL3-209ENST00000467141 TMEM134Q9H6X4 195 aa7.21□□□□□ -1.26
MSL3-209ENST00000467141 ITGB2P05107 769 aa7.2□□□□□ -1.26
MSL3-209ENST00000467141 GPR161Q8N6U8 529 aaKnown RBP7.2□□□□□ -1.26
MSL3-209ENST00000467141 WASF2Q9Y6W5 498 aa7.2□□□□□ -1.26
MSL3-209ENST00000467141 RSF1Q96T23 1441 aaPredicted RBP7.19□□□□□ -1.26
MSL3-209ENST00000467141 SCARF1Q14162 830 aa7.19□□□□□ -1.26
MSL3-209ENST00000467141 PURBQ96QR8 312 aaKnown RBP7.19□□□□□ -1.26
MSL3-209ENST00000467141 FMNL1O95466 1100 aaPredicted RBP7.18□□□□□ -1.26
MSL3-209ENST00000467141 THAP11Q96EK4 314 aa7.18□□□□□ -1.26
MSL3-209ENST00000467141 DCAF5Q96JK2 942 aa7.18□□□□□ -1.26
MSL3-209ENST00000467141 NPDC1Q9NQX5 325 aaPredicted RBP7.18□□□□□ -1.26
MSL3-209ENST00000467141 FECHP22830 423 aa7.17□□□□□ -1.26
MSL3-209ENST00000467141 MRPL14Q6P1L8 145 aaKnown RBP7.17□□□□□ -1.26
MSL3-209ENST00000467141 KRTAP19-1Q8IUB9 90 aa7.17□□□□□ -1.26
MSL3-209ENST00000467141 COL25A1Q9BXS0 654 aaPredicted RBP7.17□□□□□ -1.26
MSL3-209ENST00000467141 WDR62O43379 1518 aa7.17□□□□□ -1.26
MSL3-209ENST00000467141 SPDYE16A6NNV3 312 aaPredicted RBP7.16□□□□□ -1.26
MSL3-209ENST00000467141 MAN1A2O60476 641 aa7.15□□□□□ -1.26
MSL3-209ENST00000467141 FURINP09958 794 aa7.15□□□□□ -1.26
MSL3-209ENST00000467141 SKOR1P84550 965 aa7.15□□□□□ -1.26
MSL3-209ENST00000467141 CADPSQ9ULU8 1353 aa7.15□□□□□ -1.26
MSL3-209ENST00000467141 PDS5BQ9NTI5 1447 aa7.15□□□□□ -1.27
MSL3-209ENST00000467141 OSBPP22059 807 aa7.14□□□□□ -1.27
MSL3-209ENST00000467141 BAG6P46379 1132 aa7.14□□□□□ -1.27
MSL3-209ENST00000467141 MRC2Q9UBG0 1479 aa7.14□□□□□ -1.27
MSL3-209ENST00000467141 RBM46Q8TBY0 533 aaKnown RBP7.13□□□□□ -1.27
MSL3-209ENST00000467141 CFTRP13569 1480 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms