RNA–Protein interactions for RNA: ENST00000466185.1

PRPF4B-204, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,297 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-204ENST00000466185 IRF5Q13568 498 aa10.36□□□□□ -0.75
PRPF4B-204ENST00000466185 HMX1Q9NP08 348 aaPredicted RBP10.36□□□□□ -0.75
PRPF4B-204ENST00000466185 RABGEF1Q9UJ41 708 aa10.36□□□□□ -0.75
PRPF4B-204ENST00000466185 RETREG2Q8NC44 543 aa10.35□□□□□ -0.75
PRPF4B-204ENST00000466185 TRIM34Q9BYJ4 488 aa10.35□□□□□ -0.75
PRPF4B-204ENST00000466185 SEPT9Q9UHD8 586 aaPredicted RBP10.35□□□□□ -0.75
PRPF4B-204ENST00000466185 MTMR2Q13614 643 aa10.34□□□□□ -0.75
PRPF4B-204ENST00000466185 GPR37L1O60883 481 aa10.33□□□□□ -0.76
PRPF4B-204ENST00000466185 SLC4A5Q9BY07 1137 aa10.33□□□□□ -0.76
PRPF4B-204ENST00000466185 PPP1R15AO75807 674 aaPredicted RBP10.32□□□□□ -0.76
PRPF4B-204ENST00000466185 HELBQ8NG08 1087 aaPredicted RBP10.32□□□□□ -0.76
PRPF4B-204ENST00000466185 ADAMTS19Q8TE59 1207 aa10.32□□□□□ -0.76
PRPF4B-204ENST00000466185 CFAP99D6REC4 459 aa10.31□□□□□ -0.76
PRPF4B-204ENST00000466185 ARHGAP33O14559 1287 aa10.31□□□□□ -0.76
PRPF4B-204ENST00000466185 HDGFP51858 240 aaKnown RBP10.31□□□□□ -0.76
PRPF4B-204ENST00000466185 POTEEQ6S8J3 1075 aa10.31□□□□□ -0.76
PRPF4B-204ENST00000466185 LRRN4Q8WUT4 740 aa10.31□□□□□ -0.76
PRPF4B-204ENST00000466185 MARVELD3Q96A59 401 aa10.31□□□□□ -0.76
PRPF4B-204ENST00000466185 FUT2Q10981 343 aa10.3□□□□□ -0.76
PRPF4B-204ENST00000466185 FAM98CQ17RN3 349 aaKnown RBP10.3□□□□□ -0.76
PRPF4B-204ENST00000466185 WASHC4Q2M389 1173 aa10.3□□□□□ -0.76
PRPF4B-204ENST00000466185 HDGFL1Q5TGJ6 251 aa10.3□□□□□ -0.76
PRPF4B-204ENST00000466185 DMRTA1Q5VZB9 504 aa10.3□□□□□ -0.76
PRPF4B-204ENST00000466185 TSC1Q92574 1164 aa10.3□□□□□ -0.76
PRPF4B-204ENST00000466185 C6orf229H3BNL8 230 aa10.29□□□□□ -0.76
PRPF4B-204ENST00000466185 GRIPAP1Q4V328 841 aa10.29□□□□□ -0.76
PRPF4B-204ENST00000466185 SLF2Q8IX21 1173 aa10.29□□□□□ -0.76
PRPF4B-204ENST00000466185 KCTD17Q8N5Z5 321 aa10.29□□□□□ -0.76
PRPF4B-204ENST00000466185 CFHP08603 1231 aa10.28□□□□□ -0.76
PRPF4B-204ENST00000466185 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
PRPF4B-204ENST00000466185 SAMD7Q7Z3H4 446 aa10.28□□□□□ -0.76
PRPF4B-204ENST00000466185 EMP3P54852 163 aa10.27□□□□□ -0.77
PRPF4B-204ENST00000466185 MMRN1Q13201 1228 aa10.27□□□□□ -0.77
PRPF4B-204ENST00000466185 VARS2Q5ST30 1063 aaKnown RBP10.27□□□□□ -0.77
PRPF4B-204ENST00000466185 AXIN2Q9Y2T1 843 aa10.27□□□□□ -0.77
PRPF4B-204ENST00000466185 VAC14Q08AM6 782 aa10.26□□□□□ -0.77
PRPF4B-204ENST00000466185 AEBP1Q8IUX7 1158 aa10.26□□□□□ -0.77
PRPF4B-204ENST00000466185 EPS8L1Q8TE68 723 aa10.26□□□□□ -0.77
PRPF4B-204ENST00000466185 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
PRPF4B-204ENST00000466185 VPS9D1Q9Y2B5 631 aa10.26□□□□□ -0.77
PRPF4B-204ENST00000466185 CCDC9Q9Y3X0 531 aaKnown RBP10.26□□□□□ -0.77
PRPF4B-204ENST00000466185 ERBB3P21860 1342 aa10.26□□□□□ -0.77
PRPF4B-204ENST00000466185 ACIN1Q9UKV3 1341 aaKnown RBP10.26□□□□□ -0.77
PRPF4B-204ENST00000466185 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
PRPF4B-204ENST00000466185 EIF4G1Q04637 1599 aaKnown RBP10.24□□□□□ -0.77
PRPF4B-204ENST00000466185 PRR7Q8TB68 274 aa10.24□□□□□ -0.77
PRPF4B-204ENST00000466185 PBXIP1Q96AQ6 731 aa10.24□□□□□ -0.77
PRPF4B-204ENST00000466185 PBX2P40425 430 aa10.23□□□□□ -0.77
PRPF4B-204ENST00000466185 RANGAP1P46060 587 aaPredicted RBP10.23□□□□□ -0.77
PRPF4B-204ENST00000466185 CFAP70Q5T0N1 1121 aa10.23□□□□□ -0.77
PRPF4B-204ENST00000466185 LAPTM4BQ86VI4 370 aa10.23□□□□□ -0.77
PRPF4B-204ENST00000466185 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
PRPF4B-204ENST00000466185 ALG2Q9H553 416 aa10.23□□□□□ -0.77
PRPF4B-204ENST00000466185 CECR2Q9BXF3 1484 aa10.23□□□□□ -0.77
PRPF4B-204ENST00000466185 RNF40O75150 1001 aa10.22□□□□□ -0.77
PRPF4B-204ENST00000466185 RFX1P22670 979 aa10.22□□□□□ -0.77
PRPF4B-204ENST00000466185 NPM2Q86SE8 214 aaKnown RBP10.22□□□□□ -0.77
PRPF4B-204ENST00000466185 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.21□□□□□ -0.77
PRPF4B-204ENST00000466185 PPP1R12CQ9BZL4 782 aa10.21□□□□□ -0.77
PRPF4B-204ENST00000466185 PER1O15534 1290 aaPredicted RBP10.2□□□□□ -0.78
PRPF4B-204ENST00000466185 SRPK2P78362 688 aaKnown RBP10.2□□□□□ -0.78
PRPF4B-204ENST00000466185 NR6A1Q15406 480 aa10.2□□□□□ -0.78
PRPF4B-204ENST00000466185 KMT5BQ4FZB7 885 aa10.2□□□□□ -0.78
PRPF4B-204ENST00000466185 NBPF3Q9H094 633 aa10.2□□□□□ -0.78
PRPF4B-204ENST00000466185 BAZ1AQ9NRL2 1556 aaPredicted RBP10.19□□□□□ -0.78
PRPF4B-204ENST00000466185 FAM205CA6NFA0 338 aa10.19□□□□□ -0.78
PRPF4B-204ENST00000466185 BHMG1C9JSJ3 638 aaPredicted RBP10.19□□□□□ -0.78
PRPF4B-204ENST00000466185 PDE4CQ08493 712 aa10.19□□□□□ -0.78
PRPF4B-204ENST00000466185 MORN1Q5T089 497 aa10.19□□□□□ -0.78
PRPF4B-204ENST00000466185 RETREG3Q86VR2 466 aa10.19□□□□□ -0.78
PRPF4B-204ENST00000466185 ZFRQ96KR1 1074 aaKnown RBP10.18□□□□□ -0.78
PRPF4B-204ENST00000466185 PALM3A6NDB9 673 aaPredicted RBP10.17□□□□□ -0.78
PRPF4B-204ENST00000466185 ACTN4O43707 911 aaKnown RBP10.17□□□□□ -0.78
PRPF4B-204ENST00000466185 PUS10Q3MIT2 529 aaKnown RBP10.17□□□□□ -0.78
PRPF4B-204ENST00000466185 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
PRPF4B-204ENST00000466185 UCN2Q96RP3 112 aa10.17□□□□□ -0.78
PRPF4B-204ENST00000466185 SLC27A5Q9Y2P5 690 aa10.17□□□□□ -0.78
PRPF4B-204ENST00000466185 SMARCA4P51532 1647 aa10.17□□□□□ -0.78
PRPF4B-204ENST00000466185 SOX11P35716 441 aa10.16□□□□□ -0.78
PRPF4B-204ENST00000466185 ZNF687Q8N1G0 1237 aa10.16□□□□□ -0.78
PRPF4B-204ENST00000466185 Q3C1V9 767 aa10.15□□□□□ -0.78
PRPF4B-204ENST00000466185 DESI1Q6ICB0 168 aa10.15□□□□□ -0.78
PRPF4B-204ENST00000466185 TFIP11Q9UBB9 837 aaKnown RBP10.15□□□□□ -0.78
PRPF4B-204ENST00000466185 CC2D2AQ9P2K1 1620 aa10.15□□□□□ -0.79
PRPF4B-204ENST00000466185 LMOD1P29536 600 aaPredicted RBP10.14□□□□□ -0.79
PRPF4B-204ENST00000466185 USTQ9Y2C2 406 aa10.14□□□□□ -0.79
PRPF4B-204ENST00000466185 MROH2BQ7Z745 1585 aa10.14□□□□□ -0.79
PRPF4B-204ENST00000466185 TK2O00142 265 aa10.13□□□□□ -0.79
PRPF4B-204ENST00000466185 SEMA3FQ13275 785 aa10.13□□□□□ -0.79
PRPF4B-204ENST00000466185 LRCH3Q96II8 777 aa10.13□□□□□ -0.79
PRPF4B-204ENST00000466185 CSB-PGBD3P0DP91 1061 aa10.12□□□□□ -0.79
PRPF4B-204ENST00000466185 LYPD8Q6UX82 237 aa10.12□□□□□ -0.79
PRPF4B-204ENST00000466185 RNF19BQ6ZMZ0 732 aa10.12□□□□□ -0.79
PRPF4B-204ENST00000466185 MRPL50Q8N5N7 158 aaKnown RBP10.12□□□□□ -0.79
PRPF4B-204ENST00000466185 PNMA1Q8ND90 353 aa10.12□□□□□ -0.79
PRPF4B-204ENST00000466185 GZF1Q9H116 711 aaPredicted RBP10.12□□□□□ -0.79
PRPF4B-204ENST00000466185 BLOC1S3Q6QNY0 202 aa10.11□□□□□ -0.79
PRPF4B-204ENST00000466185 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.11□□□□□ -0.79
PRPF4B-204ENST00000466185 POTEB3A0JP26 581 aa10.1□□□□□ -0.79
PRPF4B-204ENST00000466185 POTEBQ6S5H4 581 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms