RNA–Protein interactions for RNA: ENST00000466185.1

PRPF4B-204, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,297 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-204ENST00000466185 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
PRPF4B-204ENST00000466185 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
PRPF4B-204ENST00000466185 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
PRPF4B-204ENST00000466185 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
PRPF4B-204ENST00000466185 PLPPR3Q6T4P5 718 aa18.82■□□□□ 0.6
PRPF4B-204ENST00000466185 FOXD1Q16676 465 aa18.05■□□□□ 0.48
PRPF4B-204ENST00000466185 ADRA2BP18089 450 aa17.67■□□□□ 0.42
PRPF4B-204ENST00000466185 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
PRPF4B-204ENST00000466185 POTEDQ86YR6 584 aa17.5■□□□□ 0.39
PRPF4B-204ENST00000466185 KCNA4P22459 653 aa17.16■□□□□ 0.34
PRPF4B-204ENST00000466185 PIAS4Q8N2W9 510 aaPredicted RBP16.96■□□□□ 0.31
PRPF4B-204ENST00000466185 MSH5O43196 834 aa16.91■□□□□ 0.3
PRPF4B-204ENST00000466185 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
PRPF4B-204ENST00000466185 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
PRPF4B-204ENST00000466185 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
PRPF4B-204ENST00000466185 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
PRPF4B-204ENST00000466185 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
PRPF4B-204ENST00000466185 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
PRPF4B-204ENST00000466185 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
PRPF4B-204ENST00000466185 SCAF1Q9H7N4 1312 aaKnown RBP16.01■□□□□ 0.15
PRPF4B-204ENST00000466185 ZBTB22O15209 634 aa15.82■□□□□ 0.12
PRPF4B-204ENST00000466185 MAPK8IP2Q13387 824 aaPredicted RBP15.74■□□□□ 0.11
PRPF4B-204ENST00000466185 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
PRPF4B-204ENST00000466185 RNF216Q9NWF9 866 aaPredicted RBP15.56■□□□□ 0.08
PRPF4B-204ENST00000466185 FOXD4L1Q9NU39 408 aa15.55■□□□□ 0.08
PRPF4B-204ENST00000466185 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
PRPF4B-204ENST00000466185 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
PRPF4B-204ENST00000466185 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
PRPF4B-204ENST00000466185 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
PRPF4B-204ENST00000466185 ATXN8OSP0DMR3 200 aa14.93□□□□□ -0.02
PRPF4B-204ENST00000466185 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
PRPF4B-204ENST00000466185 DCAF8L1A6NGE4 600 aa14.84□□□□□ -0.03
PRPF4B-204ENST00000466185 FKBP8Q14318 412 aa14.68□□□□□ -0.06
PRPF4B-204ENST00000466185 RTN4Q9NQC3 1192 aaKnown RBP14.68□□□□□ -0.06
PRPF4B-204ENST00000466185 AMER1Q5JTC6 1135 aaPredicted RBP14.64□□□□□ -0.07
PRPF4B-204ENST00000466185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.087e-11■■■■□ 20.2
PRPF4B-204ENST00000466185 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
PRPF4B-204ENST00000466185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.46□□□□□ -0.09
PRPF4B-204ENST00000466185 HNRNPUL2Q1KMD3 747 aaKnown RBP14.46□□□□□ -0.09
PRPF4B-204ENST00000466185 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
PRPF4B-204ENST00000466185 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
PRPF4B-204ENST00000466185 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
PRPF4B-204ENST00000466185 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
PRPF4B-204ENST00000466185 C1QBPQ07021 282 aaKnown RBP14.22□□□□□ -0.13
PRPF4B-204ENST00000466185 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.13
PRPF4B-204ENST00000466185 APLP2Q06481 763 aa14.12□□□□□ -0.15
PRPF4B-204ENST00000466185 SPDYE4A6NLX3 237 aa13.97□□□□□ -0.17
PRPF4B-204ENST00000466185 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
PRPF4B-204ENST00000466185 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
PRPF4B-204ENST00000466185 PROM2Q8N271 834 aa13.86□□□□□ -0.19
PRPF4B-204ENST00000466185 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
PRPF4B-204ENST00000466185 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
PRPF4B-204ENST00000466185 FBLN2P98095 1184 aa13.83□□□□□ -0.2
PRPF4B-204ENST00000466185 POLA2Q14181 598 aa13.78□□□□□ -0.2
PRPF4B-204ENST00000466185 VASPP50552 380 aaPredicted RBP13.75□□□□□ -0.21
PRPF4B-204ENST00000466185 CAPN15O75808 1086 aa13.72□□□□□ -0.21
PRPF4B-204ENST00000466185 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
PRPF4B-204ENST00000466185 POTEHQ6S545 545 aa13.62□□□□□ -0.23
PRPF4B-204ENST00000466185 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
PRPF4B-204ENST00000466185 ABCB7O75027 752 aa13.54□□□□□ -0.24
PRPF4B-204ENST00000466185 DSG3P32926 999 aa13.52□□□□□ -0.25
PRPF4B-204ENST00000466185 PLCB2Q00722 1185 aa13.52□□□□□ -0.25
PRPF4B-204ENST00000466185 PKD2Q13563 968 aa13.47□□□□□ -0.25
PRPF4B-204ENST00000466185 DCAF8L2P0C7V8 631 aa13.42□□□□□ -0.26
PRPF4B-204ENST00000466185 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
PRPF4B-204ENST00000466185 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
PRPF4B-204ENST00000466185 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
PRPF4B-204ENST00000466185 HAP1P54257 671 aaPredicted RBP13.32□□□□□ -0.28
PRPF4B-204ENST00000466185 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
PRPF4B-204ENST00000466185 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
PRPF4B-204ENST00000466185 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
PRPF4B-204ENST00000466185 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
PRPF4B-204ENST00000466185 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
PRPF4B-204ENST00000466185 SSUH2Q9Y2M2 353 aa13.28□□□□□ -0.28
PRPF4B-204ENST00000466185 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
PRPF4B-204ENST00000466185 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
PRPF4B-204ENST00000466185 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
PRPF4B-204ENST00000466185 MIER1Q8N108 512 aa13.16□□□□□ -0.3
PRPF4B-204ENST00000466185 NISCHQ9Y2I1 1504 aa13.15□□□□□ -0.3
PRPF4B-204ENST00000466185 BBXQ8WY36 941 aaPredicted RBP13.15□□□□□ -0.3
PRPF4B-204ENST00000466185 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
PRPF4B-204ENST00000466185 VSIG10Q8N0Z9 540 aa13.13□□□□□ -0.31
PRPF4B-204ENST00000466185 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.11□□□□□ -0.31
PRPF4B-204ENST00000466185 RGL2O15211 777 aa13.09□□□□□ -0.31
PRPF4B-204ENST00000466185 BCANQ96GW7 911 aa13.05□□□□□ -0.32
PRPF4B-204ENST00000466185 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
PRPF4B-204ENST00000466185 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
PRPF4B-204ENST00000466185 ZBTB47Q9UFB7 747 aaPredicted RBP12.99□□□□□ -0.33
PRPF4B-204ENST00000466185 CIZ1Q9ULV3 898 aaPredicted RBP12.99□□□□□ -0.33
PRPF4B-204ENST00000466185 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
PRPF4B-204ENST00000466185 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
PRPF4B-204ENST00000466185 RBM42Q9BTD8 480 aaKnown RBP12.96□□□□□ -0.33
PRPF4B-204ENST00000466185 SPRYD3Q8NCJ5 442 aa12.92□□□□□ -0.34
PRPF4B-204ENST00000466185 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.34
PRPF4B-204ENST00000466185 TRIM41Q8WV44 630 aa12.88□□□□□ -0.35
PRPF4B-204ENST00000466185 PRKCSHP14314 528 aaPredicted RBP12.87□□□□□ -0.35
PRPF4B-204ENST00000466185 TAOK2Q9UL54 1235 aa12.87□□□□□ -0.35
PRPF4B-204ENST00000466185 TSHZ2Q9NRE2 1034 aa12.86□□□□□ -0.35
PRPF4B-204ENST00000466185 GSE1Q14687 1217 aa12.79□□□□□ -0.36
PRPF4B-204ENST00000466185 HS6ST3Q8IZP7 471 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms