RNA–Protein interactions for RNA: ENST00000465271.5

CNIH4-205, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNIH4, Length 4,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-205ENST00000465271 COL18A1P39060 1754 aa12.69□□□□□ -0.38
CNIH4-205ENST00000465271 PLEKHH1Q9ULM0 1364 aa12.69□□□□□ -0.38
CNIH4-205ENST00000465271 ROBO2Q9HCK4 1378 aa12.69□□□□□ -0.38
CNIH4-205ENST00000465271 CFAP70Q5T0N1 1121 aa12.69□□□□□ -0.38
CNIH4-205ENST00000465271 KIF1AQ12756 1690 aa12.68□□□□□ -0.38
CNIH4-205ENST00000465271 INSRP06213 1382 aa12.67□□□□□ -0.38
CNIH4-205ENST00000465271 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
CNIH4-205ENST00000465271 ST20-MTHFSA0A0A6YYL1 179 aa12.66□□□□□ -0.38
CNIH4-205ENST00000465271 EIF4G2P78344 907 aaKnown RBP eCLIP12.65□□□□□ -0.38
CNIH4-205ENST00000465271 MAP2P11137 1827 aaKnown RBP12.65□□□□□ -0.38
CNIH4-205ENST00000465271 ADAMTS7Q9UKP4 1686 aa12.65□□□□□ -0.38
CNIH4-205ENST00000465271 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
CNIH4-205ENST00000465271 IQSEC2Q5JU85 1478 aa12.63□□□□□ -0.39
CNIH4-205ENST00000465271 LTN1O94822 1766 aa12.63□□□□□ -0.39
CNIH4-205ENST00000465271 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
CNIH4-205ENST00000465271 CEBPAP49715 358 aaPredicted RBP12.62□□□□□ -0.39
CNIH4-205ENST00000465271 NFAT5O94916 1531 aa12.61□□□□□ -0.39
CNIH4-205ENST00000465271 WNK3Q9BYP7 1800 aa12.61□□□□□ -0.39
CNIH4-205ENST00000465271 LRRC37A3O60309 1634 aa12.6□□□□□ -0.39
CNIH4-205ENST00000465271 SLIT3O75094 1523 aa12.6□□□□□ -0.39
CNIH4-205ENST00000465271 KTN1Q86UP2 1357 aaKnown RBP12.6□□□□□ -0.39
CNIH4-205ENST00000465271 BLMP54132 1417 aaPredicted RBP12.6□□□□□ -0.39
CNIH4-205ENST00000465271 MIER1Q8N108 512 aa12.6□□□□□ -0.39
CNIH4-205ENST00000465271 POLR3AO14802 1390 aaPredicted RBP12.6□□□□□ -0.39
CNIH4-205ENST00000465271 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
CNIH4-205ENST00000465271 NCOA3Q9Y6Q9 1424 aa12.59□□□□□ -0.39
CNIH4-205ENST00000465271 SHANK3Q9BYB0 1731 aa12.59□□□□□ -0.39
CNIH4-205ENST00000465271 DIEXFQ68CQ4 756 aaKnown RBP12.59□□□□□ -0.39
CNIH4-205ENST00000465271 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
CNIH4-205ENST00000465271 CARD14Q9BXL6 1004 aa12.59□□□□□ -0.39
CNIH4-205ENST00000465271 DLG5Q8TDM6 1919 aa12.59□□□□□ -0.39
CNIH4-205ENST00000465271 VGFO15240 615 aaPredicted RBP12.58□□□□□ -0.4
CNIH4-205ENST00000465271 NINLQ9Y2I6 1382 aa12.58□□□□□ -0.4
CNIH4-205ENST00000465271 NPHP4O75161 1426 aaPredicted RBP12.58□□□□□ -0.4
CNIH4-205ENST00000465271 FAM208AQ9UK61 1670 aaKnown RBP12.58□□□□□ -0.4
CNIH4-205ENST00000465271 ANKARQ7Z5J8 1434 aa12.58□□□□□ -0.4
CNIH4-205ENST00000465271 RGL3Q3MIN7 710 aa12.57□□□□□ -0.4
CNIH4-205ENST00000465271 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
CNIH4-205ENST00000465271 EIF3AQ14152 1382 aaKnown RBP12.57□□□□□ -0.4
CNIH4-205ENST00000465271 SIPA1L3O60292 1781 aaPredicted RBP12.57□□□□□ -0.4
CNIH4-205ENST00000465271 TBX22Q9Y458 520 aa12.56□□□□□ -0.4
CNIH4-205ENST00000465271 OVOS2A0A0J9YW53 1432 aa12.56□□□□□ -0.4
CNIH4-205ENST00000465271 OVOS2Q6IE36 1432 aa12.56□□□□□ -0.4
CNIH4-205ENST00000465271 ANKRD36BQ8N2N9 1353 aa12.55□□□□□ -0.4
CNIH4-205ENST00000465271 RGPD2P0DJD1 1756 aa12.55□□□□□ -0.4
CNIH4-205ENST00000465271 DCCP43146 1447 aa12.55□□□□□ -0.4
CNIH4-205ENST00000465271 NCAPD2Q15021 1401 aa12.55□□□□□ -0.4
CNIH4-205ENST00000465271 PRR36Q9H6K5 1346 aa12.55□□□□□ -0.4
CNIH4-205ENST00000465271 CCDC184Q52MB2 194 aa12.54□□□□□ -0.4
CNIH4-205ENST00000465271 PNPLA6Q8IY17 1366 aa12.54□□□□□ -0.4
CNIH4-205ENST00000465271 RGPD5Q99666 1765 aa12.54□□□□□ -0.4
CNIH4-205ENST00000465271 ADGRL3Q9HAR2 1447 aa12.53□□□□□ -0.4
CNIH4-205ENST00000465271 CCER2I3L3R5 266 aa12.53□□□□□ -0.4
CNIH4-205ENST00000465271 PRKRIP1Q9H875 184 aaPredicted RBP12.53□□□□□ -0.4
CNIH4-205ENST00000465271 ABCC6O95255 1503 aa12.53□□□□□ -0.4
CNIH4-205ENST00000465271 A0A1W2PP64 1363 aa12.52□□□□□ -0.4
CNIH4-205ENST00000465271 KDM2AQ9Y2K7 1162 aa12.52□□□□□ -0.4
CNIH4-205ENST00000465271 TRHP20396 242 aaPredicted RBP12.52□□□□□ -0.41
CNIH4-205ENST00000465271 PXDNQ92626 1479 aa12.51□□□□□ -0.41
CNIH4-205ENST00000465271 TMEM132EQ6IEE7 984 aa12.51□□□□□ -0.41
CNIH4-205ENST00000465271 CENPJQ9HC77 1338 aaPredicted RBP12.51□□□□□ -0.41
CNIH4-205ENST00000465271 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.51□□□□□ -0.41
CNIH4-205ENST00000465271 N4BP2Q86UW6 1770 aaPredicted RBP12.5□□□□□ -0.41
CNIH4-205ENST00000465271 COL16A1Q07092 1604 aaPredicted RBP12.49□□□□□ -0.41
CNIH4-205ENST00000465271 PLCH1Q4KWH8 1693 aa12.49□□□□□ -0.41
CNIH4-205ENST00000465271 USP31Q70CQ4 1352 aa12.48□□□□□ -0.41
CNIH4-205ENST00000465271 GLI3P10071 1580 aa12.48□□□□□ -0.41
CNIH4-205ENST00000465271 AHDC1Q5TGY3 1603 aaPredicted RBP12.48□□□□□ -0.41
CNIH4-205ENST00000465271 NRAPQ86VF7 1730 aa12.48□□□□□ -0.41
CNIH4-205ENST00000465271 PKD1L3Q7Z443 1732 aa12.47□□□□□ -0.41
CNIH4-205ENST00000465271 NSD2O96028 1365 aa12.46□□□□□ -0.42
CNIH4-205ENST00000465271 USP6P35125 1406 aa12.45□□□□□ -0.42
CNIH4-205ENST00000465271 MLECQ14165 292 aa12.45□□□□□ -0.42
CNIH4-205ENST00000465271 PARP4Q9UKK3 1724 aaKnown RBP12.45□□□□□ -0.42
CNIH4-205ENST00000465271 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
CNIH4-205ENST00000465271 DDX10Q13206 875 aaKnown RBP12.44□□□□□ -0.42
CNIH4-205ENST00000465271 BRD4O60885 1362 aaPredicted RBP12.44□□□□□ -0.42
CNIH4-205ENST00000465271 PAPPAQ13219 1627 aa12.43□□□□□ -0.42
CNIH4-205ENST00000465271 CDK12Q9NYV4 1490 aaPredicted RBP12.42□□□□□ -0.42
CNIH4-205ENST00000465271 ATAD2Q6PL18 1390 aa12.42□□□□□ -0.42
CNIH4-205ENST00000465271 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
CNIH4-205ENST00000465271 PPIP5K1Q6PFW1 1433 aa12.42□□□□□ -0.42
CNIH4-205ENST00000465271 NSD3Q9BZ95 1437 aa12.41□□□□□ -0.42
CNIH4-205ENST00000465271 AATKQ6ZMQ8 1374 aa12.41□□□□□ -0.42
CNIH4-205ENST00000465271 PLEKHG3A1L390 1219 aa12.41□□□□□ -0.42
CNIH4-205ENST00000465271 THEMISQ8N1K5 641 aaPredicted RBP12.41□□□□□ -0.42
CNIH4-205ENST00000465271 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
CNIH4-205ENST00000465271 PRAM1Q96QH2 718 aa12.41□□□□□ -0.42
CNIH4-205ENST00000465271 ZNF521Q96K83 1311 aa12.41□□□□□ -0.42
CNIH4-205ENST00000465271 ROBO1Q9Y6N7 1651 aa12.4□□□□□ -0.42
CNIH4-205ENST00000465271 TMF1P82094 1093 aa12.39□□□□□ -0.43
CNIH4-205ENST00000465271 KDM3BQ7LBC6 1761 aa12.39□□□□□ -0.43
CNIH4-205ENST00000465271 WAPLQ7Z5K2 1190 aa12.39□□□□□ -0.43
CNIH4-205ENST00000465271 PNISRQ8TF01 805 aaKnown RBP12.39□□□□□ -0.43
CNIH4-205ENST00000465271 C1orf167Q5SNV9 1468 aa12.38□□□□□ -0.43
CNIH4-205ENST00000465271 CICQ96RK0 1608 aaPredicted RBP12.38□□□□□ -0.43
CNIH4-205ENST00000465271 WASLO00401 505 aaPredicted RBP12.38□□□□□ -0.43
CNIH4-205ENST00000465271 PHF23Q9BUL5 403 aaPredicted RBP12.38□□□□□ -0.43
CNIH4-205ENST00000465271 TRAK1Q9UPV9 953 aa12.38□□□□□ -0.43
CNIH4-205ENST00000465271 PANK3Q9H999 370 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms