RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 MAP2P11137 1827 aaKnown RBP10.09□□□□□ -0.79
NPHP1-209ENST00000461707 XIRP1Q702N8 1843 aaKnown RBP10.09□□□□□ -0.79
NPHP1-209ENST00000461707 RGPD8O14715 1765 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-209ENST00000461707 AFAP1Q8N556 730 aa10.08□□□□□ -0.8
NPHP1-209ENST00000461707 MED1Q15648 1581 aaPredicted RBP10.08□□□□□ -0.8
NPHP1-209ENST00000461707 EFCAB2Q5VUJ9 269 aa10.07□□□□□ -0.8
NPHP1-209ENST00000461707 AMER1Q5JTC6 1135 aaPredicted RBP10.06□□□□□ -0.8
NPHP1-209ENST00000461707 MST1RQ04912 1400 aa10.06□□□□□ -0.8
NPHP1-209ENST00000461707 SSH2Q76I76 1423 aa10.05□□□□□ -0.8
NPHP1-209ENST00000461707 PNPLA6Q8IY17 1366 aa10.05□□□□□ -0.8
NPHP1-209ENST00000461707 CFAP65Q6ZU64 1925 aaKnown RBP10.04□□□□□ -0.8
NPHP1-209ENST00000461707 CPSF1Q10570 1443 aaKnown RBP10.04□□□□□ -0.8
NPHP1-209ENST00000461707 CDK12Q9NYV4 1490 aaPredicted RBP10.03□□□□□ -0.8
NPHP1-209ENST00000461707 FAM208AQ9UK61 1670 aaKnown RBP10.03□□□□□ -0.8
NPHP1-209ENST00000461707 ATP7BP35670 1465 aa10.03□□□□□ -0.8
NPHP1-209ENST00000461707 NEFLP07196 543 aa10.02□□□□□ -0.8
NPHP1-209ENST00000461707 STRCP1A6NGW2 1772 aa10.02□□□□□ -0.8
NPHP1-209ENST00000461707 GLI3P10071 1580 aa10.02□□□□□ -0.81
NPHP1-209ENST00000461707 YTHDC2Q9H6S0 1430 aaKnown RBP10.02□□□□□ -0.81
NPHP1-209ENST00000461707 RPGRIP1LQ68CZ1 1315 aa10.02□□□□□ -0.81
NPHP1-209ENST00000461707 KDM3BQ7LBC6 1761 aa10.02□□□□□ -0.81
NPHP1-209ENST00000461707 POLR3AO14802 1390 aaPredicted RBP10.01□□□□□ -0.81
NPHP1-209ENST00000461707 ABCC6O95255 1503 aa10.01□□□□□ -0.81
NPHP1-209ENST00000461707 ALS2Q96Q42 1657 aa10□□□□□ -0.81
NPHP1-209ENST00000461707 PPIP5K1Q6PFW1 1433 aa10□□□□□ -0.81
NPHP1-209ENST00000461707 SALL2Q9Y467 1007 aaPredicted RBP10□□□□□ -0.81
NPHP1-209ENST00000461707 MYBBP1AQ9BQG0 1328 aaKnown RBP9.99□□□□□ -0.81
NPHP1-209ENST00000461707 FAM135BQ49AJ0 1406 aa9.99□□□□□ -0.81
NPHP1-209ENST00000461707 B4GALNT3Q6L9W6 998 aa9.99□□□□□ -0.81
NPHP1-209ENST00000461707 C14orf93Q9H972 538 aaKnown RBP9.99□□□□□ -0.81
NPHP1-209ENST00000461707 SPAG9O60271 1321 aaKnown RBP9.99□□□□□ -0.81
NPHP1-209ENST00000461707 NINLQ9Y2I6 1382 aa9.98□□□□□ -0.81
NPHP1-209ENST00000461707 ABCC11Q96J66 1382 aa9.98□□□□□ -0.81
NPHP1-209ENST00000461707 RBM19Q9Y4C8 960 aaKnown RBP9.98□□□□□ -0.81
NPHP1-209ENST00000461707 NCAPD2Q15021 1401 aa9.98□□□□□ -0.81
NPHP1-209ENST00000461707 ADAMTS13Q76LX8 1427 aa9.98□□□□□ -0.81
NPHP1-209ENST00000461707 ABCA3Q99758 1704 aa9.98□□□□□ -0.81
NPHP1-209ENST00000461707 COL18A1P39060 1754 aa9.97□□□□□ -0.81
NPHP1-209ENST00000461707 PPP6R1Q9UPN7 881 aa9.97□□□□□ -0.81
NPHP1-209ENST00000461707 SHANK3Q9BYB0 1731 aa9.97□□□□□ -0.81
NPHP1-209ENST00000461707 PARP4Q9UKK3 1724 aaKnown RBP9.97□□□□□ -0.81
NPHP1-209ENST00000461707 LTN1O94822 1766 aa9.96□□□□□ -0.81
NPHP1-209ENST00000461707 RALBP1Q15311 655 aa9.96□□□□□ -0.82
NPHP1-209ENST00000461707 CC2D1BQ5T0F9 858 aaKnown RBP9.96□□□□□ -0.82
NPHP1-209ENST00000461707 PAPPAQ13219 1627 aa9.96□□□□□ -0.82
NPHP1-209ENST00000461707 CEP170BQ9Y4F5 1589 aaPredicted RBP9.95□□□□□ -0.82
NPHP1-209ENST00000461707 TMC1Q8TDI8 760 aa9.95□□□□□ -0.82
NPHP1-209ENST00000461707 NSD2O96028 1365 aa9.95□□□□□ -0.82
NPHP1-209ENST00000461707 ADGRF5Q8IZF2 1346 aa9.94□□□□□ -0.82
NPHP1-209ENST00000461707 PLEKHH1Q9ULM0 1364 aa9.94□□□□□ -0.82
NPHP1-209ENST00000461707 CACNA1FO60840 1977 aa9.94□□□□□ -0.82
NPHP1-209ENST00000461707 NKTRP30414 1462 aaKnown RBP9.94□□□□□ -0.82
NPHP1-209ENST00000461707 PTCH1Q13635 1447 aa9.94□□□□□ -0.82
NPHP1-209ENST00000461707 WNK3Q9BYP7 1800 aa9.94□□□□□ -0.82
NPHP1-209ENST00000461707 PANK3Q9H999 370 aa9.94□□□□□ -0.82
NPHP1-209ENST00000461707 KIF3BO15066 747 aa9.93□□□□□ -0.82
NPHP1-209ENST00000461707 CICQ96RK0 1608 aaPredicted RBP9.93□□□□□ -0.82
NPHP1-209ENST00000461707 CARD14Q9BXL6 1004 aa9.92□□□□□ -0.82
NPHP1-209ENST00000461707 MYT1LQ9UL68 1186 aa9.92□□□□□ -0.82
NPHP1-209ENST00000461707 ZMYM3Q14202 1370 aa9.92□□□□□ -0.82
NPHP1-209ENST00000461707 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
NPHP1-209ENST00000461707 MSH5O43196 834 aa9.91□□□□□ -0.82
NPHP1-209ENST00000461707 CDCA7LQ96GN5 454 aa9.91□□□□□ -0.82
NPHP1-209ENST00000461707 SENP3Q9H4L4 574 aaPredicted RBP9.91□□□□□ -0.82
NPHP1-209ENST00000461707 ANKRD36BQ8N2N9 1353 aa9.91□□□□□ -0.82
NPHP1-209ENST00000461707 KDM2BQ8NHM5 1336 aa9.9□□□□□ -0.82
NPHP1-209ENST00000461707 SIRT1Q96EB6 747 aa9.9□□□□□ -0.82
NPHP1-209ENST00000461707 PKD1L3Q7Z443 1732 aa9.9□□□□□ -0.82
NPHP1-209ENST00000461707 NFAT5O94916 1531 aa9.89□□□□□ -0.83
NPHP1-209ENST00000461707 NUDCQ9Y266 331 aa9.89□□□□□ -0.83
NPHP1-209ENST00000461707 UBR2Q8IWV8 1755 aa9.89□□□□□ -0.83
NPHP1-209ENST00000461707 DDX60Q8IY21 1712 aaKnown RBP9.88□□□□□ -0.83
NPHP1-209ENST00000461707 EIF3AQ14152 1382 aaKnown RBP9.88□□□□□ -0.83
NPHP1-209ENST00000461707 CFAP70Q5T0N1 1121 aa9.88□□□□□ -0.83
NPHP1-209ENST00000461707 PPP4R2Q9NY27 417 aa9.88□□□□□ -0.83
NPHP1-209ENST00000461707 RGPD2P0DJD1 1756 aa9.88□□□□□ -0.83
NPHP1-209ENST00000461707 PTPRUQ92729 1446 aa9.87□□□□□ -0.83
NPHP1-209ENST00000461707 SLIT3O75094 1523 aa9.87□□□□□ -0.83
NPHP1-209ENST00000461707 OVOS2A0A0J9YW53 1432 aa9.87□□□□□ -0.83
NPHP1-209ENST00000461707 OVOS2Q6IE36 1432 aa9.87□□□□□ -0.83
NPHP1-209ENST00000461707 NUTM2DQ5VT03 806 aaPredicted RBP9.86□□□□□ -0.83
NPHP1-209ENST00000461707 KIF1AQ12756 1690 aa9.84□□□□□ -0.83
NPHP1-209ENST00000461707 RAPGEF3O95398 923 aa9.84□□□□□ -0.83
NPHP1-209ENST00000461707 TMF1P82094 1093 aa9.84□□□□□ -0.83
NPHP1-209ENST00000461707 NLRP13Q86W25 1043 aa9.84□□□□□ -0.83
NPHP1-209ENST00000461707 SKAP1Q86WV1 359 aa9.84□□□□□ -0.83
NPHP1-209ENST00000461707 COL22A1Q8NFW1 1626 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-209ENST00000461707 PLIN1O60240 522 aa9.84□□□□□ -0.83
NPHP1-209ENST00000461707 FANCIQ9NVI1 1328 aa9.83□□□□□ -0.84
NPHP1-209ENST00000461707 GGT6Q6P531 493 aa9.83□□□□□ -0.84
NPHP1-209ENST00000461707 ADAMTS8Q9UP79 889 aa9.83□□□□□ -0.84
NPHP1-209ENST00000461707 AATKQ6ZMQ8 1374 aa9.83□□□□□ -0.84
NPHP1-209ENST00000461707 STRCQ7RTU9 1775 aa9.83□□□□□ -0.84
NPHP1-209ENST00000461707 PIK3R4Q99570 1358 aa9.83□□□□□ -0.84
NPHP1-209ENST00000461707 PLEKHF1Q96S99 279 aa9.82□□□□□ -0.84
NPHP1-209ENST00000461707 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.82□□□□□ -0.84
NPHP1-209ENST00000461707 CCDC27Q2M243 656 aa9.82□□□□□ -0.84
NPHP1-209ENST00000461707 USP31Q70CQ4 1352 aa9.82□□□□□ -0.84
NPHP1-209ENST00000461707 CHGAP10645 457 aaKnown RBP9.82□□□□□ -0.84
NPHP1-209ENST00000461707 PDE3BQ13370 1112 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms