RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 TRAK1Q9UPV9 953 aa12.97□□□□□ -0.33
DHFR2-203ENST00000461173 PREX1Q8TCU6 1659 aa12.97□□□□□ -0.33
DHFR2-203ENST00000461173 TMEM131LA2VDJ0 1609 aa12.96□□□□□ -0.33
DHFR2-203ENST00000461173 E9PSI1 815 aa12.96□□□□□ -0.33
DHFR2-203ENST00000461173 IDI1Q13907 227 aa12.96□□□□□ -0.33
DHFR2-203ENST00000461173 CGNL1Q0VF96 1302 aa12.95□□□□□ -0.34
DHFR2-203ENST00000461173 NKTRP30414 1462 aaKnown RBP12.95□□□□□ -0.34
DHFR2-203ENST00000461173 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
DHFR2-203ENST00000461173 TULP4Q9NRJ4 1543 aa12.95□□□□□ -0.34
DHFR2-203ENST00000461173 DIP2BQ9P265 1576 aa12.93□□□□□ -0.34
DHFR2-203ENST00000461173 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
DHFR2-203ENST00000461173 TMEM132EQ6IEE7 984 aa12.92□□□□□ -0.34
DHFR2-203ENST00000461173 SLC12A5Q9H2X9 1139 aa12.92□□□□□ -0.34
DHFR2-203ENST00000461173 SHPRHQ149N8 1683 aa12.92□□□□□ -0.34
DHFR2-203ENST00000461173 APAF1O14727 1248 aa12.92□□□□□ -0.34
DHFR2-203ENST00000461173 ATAD2Q6PL18 1390 aa12.92□□□□□ -0.34
DHFR2-203ENST00000461173 MED14O60244 1454 aa12.92□□□□□ -0.34
DHFR2-203ENST00000461173 CLTCQ00610 1675 aaKnown RBP12.91□□□□□ -0.34
DHFR2-203ENST00000461173 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
DHFR2-203ENST00000461173 CRBNQ96SW2 442 aa12.91□□□□□ -0.34
DHFR2-203ENST00000461173 PTPRMP28827 1452 aa12.9□□□□□ -0.34
DHFR2-203ENST00000461173 IQSEC2Q5JU85 1478 aa12.9□□□□□ -0.34
DHFR2-203ENST00000461173 ABCC11Q96J66 1382 aa12.9□□□□□ -0.34
DHFR2-203ENST00000461173 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
DHFR2-203ENST00000461173 CFAP53Q96M91 514 aa12.9□□□□□ -0.34
DHFR2-203ENST00000461173 ANP32AP39687 249 aaKnown RBP12.89□□□□□ -0.35
DHFR2-203ENST00000461173 KDM2BQ8NHM5 1336 aa12.89□□□□□ -0.35
DHFR2-203ENST00000461173 DLC1Q96QB1 1528 aa12.89□□□□□ -0.35
DHFR2-203ENST00000461173 SPATA31D1Q6ZQQ2 1576 aa12.88□□□□□ -0.35
DHFR2-203ENST00000461173 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
DHFR2-203ENST00000461173 CENPQQ7L2Z9 268 aaPredicted RBP12.88□□□□□ -0.35
DHFR2-203ENST00000461173 WDR63Q8IWG1 891 aa12.88□□□□□ -0.35
DHFR2-203ENST00000461173 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
DHFR2-203ENST00000461173 RIMBP3CA6NJZ7 1639 aa12.88□□□□□ -0.35
DHFR2-203ENST00000461173 RIMBP3BA6NNM3 1639 aa12.88□□□□□ -0.35
DHFR2-203ENST00000461173 RIMBP3Q9UFD9 1639 aa12.88□□□□□ -0.35
DHFR2-203ENST00000461173 PLIN1O60240 522 aa12.88□□□□□ -0.35
DHFR2-203ENST00000461173 AAMPQ13685 434 aa12.88□□□□□ -0.35
DHFR2-203ENST00000461173 WWC1Q8IX03 1113 aa12.88□□□□□ -0.35
DHFR2-203ENST00000461173 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
DHFR2-203ENST00000461173 CCDC146Q8IYE0 955 aa12.87□□□□□ -0.35
DHFR2-203ENST00000461173 MYO5BQ9ULV0 1848 aa12.87□□□□□ -0.35
DHFR2-203ENST00000461173 FAM69CQ0P6D2 419 aa12.86□□□□□ -0.35
DHFR2-203ENST00000461173 CYB5RLQ6IPT4 315 aa12.86□□□□□ -0.35
DHFR2-203ENST00000461173 IPO9Q96P70 1041 aaKnown RBP12.86□□□□□ -0.35
DHFR2-203ENST00000461173 ALKQ9UM73 1620 aa12.86□□□□□ -0.35
DHFR2-203ENST00000461173 BACH2Q9BYV9 841 aa12.85□□□□□ -0.35
DHFR2-203ENST00000461173 ARHGEF40Q8TER5 1519 aa12.84□□□□□ -0.35
DHFR2-203ENST00000461173 ADGRB2O60241 1585 aa12.84□□□□□ -0.35
DHFR2-203ENST00000461173 ANKRD26Q9UPS8 1709 aa12.84□□□□□ -0.35
DHFR2-203ENST00000461173 PDE4AP27815 886 aa12.84□□□□□ -0.35
DHFR2-203ENST00000461173 MTHFSP49914 203 aa12.84□□□□□ -0.35
DHFR2-203ENST00000461173 SPINK5Q9NQ38 1064 aaPredicted RBP12.84□□□□□ -0.35
DHFR2-203ENST00000461173 TERF2IPQ9NYB0 399 aa12.84□□□□□ -0.35
DHFR2-203ENST00000461173 NOP58Q9Y2X3 529 aaKnown RBP12.84□□□□□ -0.35
DHFR2-203ENST00000461173 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.35
DHFR2-203ENST00000461173 A0A1W2PP64 1363 aa12.83□□□□□ -0.36
DHFR2-203ENST00000461173 A2ML1A8K2U0 1454 aa12.83□□□□□ -0.36
DHFR2-203ENST00000461173 CT47B1P0C2W7 299 aaPredicted RBP12.83□□□□□ -0.36
DHFR2-203ENST00000461173 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
DHFR2-203ENST00000461173 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
DHFR2-203ENST00000461173 CD163L1Q9NR16 1453 aa12.81□□□□□ -0.36
DHFR2-203ENST00000461173 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
DHFR2-203ENST00000461173 COL3A1P02461 1466 aaPredicted RBP12.8□□□□□ -0.36
DHFR2-203ENST00000461173 ATP7BP35670 1465 aa12.8□□□□□ -0.36
DHFR2-203ENST00000461173 PNPLA6Q8IY17 1366 aa12.8□□□□□ -0.36
DHFR2-203ENST00000461173 SRPK2P78362 688 aaKnown RBP12.8□□□□□ -0.36
DHFR2-203ENST00000461173 NUTM2DQ5VT03 806 aaPredicted RBP12.8□□□□□ -0.36
DHFR2-203ENST00000461173 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
DHFR2-203ENST00000461173 PRAM1Q96QH2 718 aa12.8□□□□□ -0.36
DHFR2-203ENST00000461173 POGKQ9P215 609 aa12.8□□□□□ -0.36
DHFR2-203ENST00000461173 SETD1AO15047 1707 aaKnown RBP12.8□□□□□ -0.36
DHFR2-203ENST00000461173 FBXO31Q5XUX0 539 aaPredicted RBP12.79□□□□□ -0.36
DHFR2-203ENST00000461173 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.79□□□□□ -0.36
DHFR2-203ENST00000461173 RIMS2Q9UQ26 1411 aa12.79□□□□□ -0.36
DHFR2-203ENST00000461173 HDGFL2Q7Z4V5 671 aaPredicted RBP12.78□□□□□ -0.36
DHFR2-203ENST00000461173 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
DHFR2-203ENST00000461173 MYH16Q9H6N6 1097 aa12.78□□□□□ -0.36
DHFR2-203ENST00000461173 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
DHFR2-203ENST00000461173 CDC42BPGQ6DT37 1551 aa12.78□□□□□ -0.36
DHFR2-203ENST00000461173 IL16Q14005 1332 aa12.77□□□□□ -0.36
DHFR2-203ENST00000461173 FYB1O15117 783 aa12.77□□□□□ -0.37
DHFR2-203ENST00000461173 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.37
DHFR2-203ENST00000461173 STAG3Q9UJ98 1225 aa12.77□□□□□ -0.37
DHFR2-203ENST00000461173 BCAR3O75815 825 aa12.76□□□□□ -0.37
DHFR2-203ENST00000461173 RARSP54136 660 aaKnown RBP12.76□□□□□ -0.37
DHFR2-203ENST00000461173 STK26Q9P289 416 aa12.76□□□□□ -0.37
DHFR2-203ENST00000461173 ZMYM3Q14202 1370 aa12.76□□□□□ -0.37
DHFR2-203ENST00000461173 TECPR2O15040 1411 aa12.76□□□□□ -0.37
DHFR2-203ENST00000461173 FAM135BQ49AJ0 1406 aa12.76□□□□□ -0.37
DHFR2-203ENST00000461173 TNNT2P45379 298 aaPredicted RBP12.76□□□□□ -0.37
DHFR2-203ENST00000461173 HDGFP51858 240 aaKnown RBP12.76□□□□□ -0.37
DHFR2-203ENST00000461173 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
DHFR2-203ENST00000461173 CDK19Q9BWU1 502 aa12.76□□□□□ -0.37
DHFR2-203ENST00000461173 U2AF1L5P0DN76 240 aaPredicted RBP12.75□□□□□ -0.37
DHFR2-203ENST00000461173 U2AF1Q01081 240 aaKnown RBP eCLIP12.75□□□□□ -0.37
DHFR2-203ENST00000461173 MINK1Q8N4C8 1332 aaPredicted RBP12.75□□□□□ -0.37
DHFR2-203ENST00000461173 KNDC1Q76NI1 1749 aa12.74□□□□□ -0.37
DHFR2-203ENST00000461173 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
DHFR2-203ENST00000461173 TSPOAP1O95153 1857 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms