RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 RAPGEF3O95398 923 aa7.99□□□□□ -1.13
CNN3-204ENST00000461018 BCORL1Q5H9F3 1711 aa7.99□□□□□ -1.13
CNN3-204ENST00000461018 CD109Q6YHK3 1445 aa7.99□□□□□ -1.13
CNN3-204ENST00000461018 VSIG10Q8N0Z9 540 aa7.99□□□□□ -1.13
CNN3-204ENST00000461018 UACAQ9BZF9 1416 aa7.99□□□□□ -1.13
CNN3-204ENST00000461018 UHRF1BP1LA0JNW5 1464 aa7.99□□□□□ -1.13
CNN3-204ENST00000461018 ARID4BQ4LE39 1312 aaPredicted RBP7.99□□□□□ -1.13
CNN3-204ENST00000461018 KDM5BQ9UGL1 1544 aa7.98□□□□□ -1.13
CNN3-204ENST00000461018 ZCCHC11Q5TAX3 1644 aaKnown RBP7.97□□□□□ -1.13
CNN3-204ENST00000461018 CDCA7LQ96GN5 454 aa7.97□□□□□ -1.13
CNN3-204ENST00000461018 PDZRN3Q9UPQ7 1066 aa7.97□□□□□ -1.13
CNN3-204ENST00000461018 MAGI3Q5TCQ9 1506 aa7.97□□□□□ -1.13
CNN3-204ENST00000461018 NUTM2FA1L443 756 aa7.96□□□□□ -1.14
CNN3-204ENST00000461018 HDGFP51858 240 aaKnown RBP7.96□□□□□ -1.14
CNN3-204ENST00000461018 PRSS12P56730 875 aa7.96□□□□□ -1.14
CNN3-204ENST00000461018 STRCQ7RTU9 1775 aa7.95□□□□□ -1.14
CNN3-204ENST00000461018 SMAPO00193 183 aa7.95□□□□□ -1.14
CNN3-204ENST00000461018 GGCXP38435 758 aa7.95□□□□□ -1.14
CNN3-204ENST00000461018 WDR7Q9Y4E6 1490 aa7.94□□□□□ -1.14
CNN3-204ENST00000461018 NBPF26B4DH59 902 aa7.94□□□□□ -1.14
CNN3-204ENST00000461018 ZNF516Q92618 1163 aa7.94□□□□□ -1.14
CNN3-204ENST00000461018 ARAP3Q8WWN8 1544 aa7.93□□□□□ -1.14
CNN3-204ENST00000461018 NECTIN2Q92692 538 aa7.93□□□□□ -1.14
CNN3-204ENST00000461018 TATDN2Q93075 761 aa7.93□□□□□ -1.14
CNN3-204ENST00000461018 LTBP4Q8N2S1 1624 aa7.92□□□□□ -1.14
CNN3-204ENST00000461018 CEBPAP49715 358 aaPredicted RBP7.92□□□□□ -1.14
CNN3-204ENST00000461018 ZNF775Q96BV0 537 aaPredicted RBP7.92□□□□□ -1.14
CNN3-204ENST00000461018 FAM198AQ9UFP1 575 aa7.92□□□□□ -1.14
CNN3-204ENST00000461018 PNMA3Q9UL41 463 aa7.92□□□□□ -1.14
CNN3-204ENST00000461018 IGF1RP08069 1367 aa7.92□□□□□ -1.14
CNN3-204ENST00000461018 DISP1Q96F81 1524 aa7.92□□□□□ -1.14
CNN3-204ENST00000461018 BIVM-ERCC5R4GMW8 1640 aa7.92□□□□□ -1.14
CNN3-204ENST00000461018 RNF40O75150 1001 aa7.91□□□□□ -1.14
CNN3-204ENST00000461018 MLECQ14165 292 aa7.91□□□□□ -1.14
CNN3-204ENST00000461018 SMYD5Q6GMV2 418 aa7.91□□□□□ -1.14
CNN3-204ENST00000461018 NPDC1Q9NQX5 325 aaPredicted RBP7.91□□□□□ -1.14
CNN3-204ENST00000461018 CARMIL2Q6F5E8 1435 aa7.91□□□□□ -1.14
CNN3-204ENST00000461018 YEATS2Q9ULM3 1422 aa7.91□□□□□ -1.14
CNN3-204ENST00000461018 SIGLEC1Q9BZZ2 1709 aa7.91□□□□□ -1.14
CNN3-204ENST00000461018 CFAP43Q8NDM7 1665 aa7.9□□□□□ -1.14
CNN3-204ENST00000461018 APLP1P51693 650 aa7.9□□□□□ -1.14
CNN3-204ENST00000461018 RBM26Q5T8P6 1007 aaKnown RBP7.9□□□□□ -1.14
CNN3-204ENST00000461018 PADI6Q6TGC4 694 aa7.9□□□□□ -1.14
CNN3-204ENST00000461018 TMUB1Q9BVT8 246 aa7.9□□□□□ -1.14
CNN3-204ENST00000461018 MED1Q15648 1581 aaPredicted RBP7.89□□□□□ -1.15
CNN3-204ENST00000461018 TESPA1A2RU30 521 aaPredicted RBP7.89□□□□□ -1.15
CNN3-204ENST00000461018 UBAP1LF5GYI3 381 aa7.89□□□□□ -1.15
CNN3-204ENST00000461018 NUDT18Q6ZVK8 323 aa7.89□□□□□ -1.15
CNN3-204ENST00000461018 NKX2-3Q8TAU0 364 aa7.89□□□□□ -1.15
CNN3-204ENST00000461018 FRMPD1Q5SYB0 1578 aa7.88□□□□□ -1.15
CNN3-204ENST00000461018 ARID3CA6NKF2 412 aa7.88□□□□□ -1.15
CNN3-204ENST00000461018 C3orf80F5H4A9 247 aa7.88□□□□□ -1.15
CNN3-204ENST00000461018 HSPA1LP34931 641 aa7.88□□□□□ -1.15
CNN3-204ENST00000461018 PTGDRQ13258 359 aa7.87□□□□□ -1.15
CNN3-204ENST00000461018 FCHSD2O94868 740 aa7.85□□□□□ -1.15
CNN3-204ENST00000461018 COPS2P61201 443 aa7.85□□□□□ -1.15
CNN3-204ENST00000461018 SLF2Q8IX21 1173 aa7.85□□□□□ -1.15
CNN3-204ENST00000461018 RBM27Q9P2N5 1060 aaKnown RBP7.85□□□□□ -1.15
CNN3-204ENST00000461018 SLC4A3P48751 1232 aa7.84□□□□□ -1.15
CNN3-204ENST00000461018 FAM161AQ3B820 660 aa7.84□□□□□ -1.15
CNN3-204ENST00000461018 RGS17Q9UGC6 210 aaPredicted RBP7.84□□□□□ -1.15
CNN3-204ENST00000461018 PTPRTO14522 1441 aa7.84□□□□□ -1.15
CNN3-204ENST00000461018 ZNF335Q9H4Z2 1342 aaPredicted RBP7.83□□□□□ -1.16
CNN3-204ENST00000461018 TULP1O00294 542 aaPredicted RBP7.83□□□□□ -1.16
CNN3-204ENST00000461018 ZPR1O75312 459 aa7.83□□□□□ -1.16
CNN3-204ENST00000461018 PKDCCQ504Y2 493 aa7.83□□□□□ -1.16
CNN3-204ENST00000461018 IQGAP2Q13576 1575 aa7.83□□□□□ -1.16
CNN3-204ENST00000461018 DGAT1O75907 488 aa7.82□□□□□ -1.16
CNN3-204ENST00000461018 SLC19A1P41440 591 aa7.82□□□□□ -1.16
CNN3-204ENST00000461018 PIP4K2BP78356 416 aa7.82□□□□□ -1.16
CNN3-204ENST00000461018 SWT1Q5T5J6 900 aaKnown RBP7.82□□□□□ -1.16
CNN3-204ENST00000461018 TTC13Q8NBP0 860 aa7.82□□□□□ -1.16
CNN3-204ENST00000461018 PRR14Q9BWN1 585 aa7.82□□□□□ -1.16
CNN3-204ENST00000461018 PREX1Q8TCU6 1659 aa7.82□□□□□ -1.16
CNN3-204ENST00000461018 CARMIL1Q5VZK9 1371 aa7.82□□□□□ -1.16
CNN3-204ENST00000461018 IQSEC2Q5JU85 1478 aa7.81□□□□□ -1.16
CNN3-204ENST00000461018 TRIM67Q6ZTA4 783 aa7.81□□□□□ -1.16
CNN3-204ENST00000461018 TTC37Q6PGP7 1564 aa7.8□□□□□ -1.16
CNN3-204ENST00000461018 FER1L4A9Z1Z3 1794 aa7.8□□□□□ -1.16
CNN3-204ENST00000461018 ARHGEF40Q8TER5 1519 aa7.8□□□□□ -1.16
CNN3-204ENST00000461018 MYT1Q01538 1121 aa7.8□□□□□ -1.16
CNN3-204ENST00000461018 RBM46Q8TBY0 533 aaKnown RBP7.8□□□□□ -1.16
CNN3-204ENST00000461018 GPIHBP1Q8IV16 184 aa7.79□□□□□ -1.16
CNN3-204ENST00000461018 KIAA0556O60303 1618 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 RNF223E7ERA6 249 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 PRR20EP86478 221 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 PRR20CP86479 221 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 PRR20DP86480 221 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 PRR20BP86481 221 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 PRR20AP86496 221 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 HIC1Q14526 733 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 SPRYD7Q5W111 196 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 ZNF598Q86UK7 904 aaKnown RBP7.78□□□□□ -1.16
CNN3-204ENST00000461018 EYA1Q99502 592 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 PCDHB3Q9Y5E6 796 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 ADGRG1Q9Y653 693 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 ABCA8O94911 1581 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 UGGT2Q9NYU1 1516 aa7.78□□□□□ -1.16
CNN3-204ENST00000461018 PHLDB1Q86UU1 1377 aa7.77□□□□□ -1.17
CNN3-204ENST00000461018 GNPATO15228 680 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms