RNA–Protein interactions for RNA: ENST00000460837.2

PTCD2-203, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-203ENST00000460837 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
PTCD2-203ENST00000460837 TATDN2Q93075 761 aa11.44□□□□□ -0.58
PTCD2-203ENST00000460837 PNMA3Q9UL41 463 aa11.44□□□□□ -0.58
PTCD2-203ENST00000460837 MAP3K1Q13233 1512 aa11.44□□□□□ -0.58
PTCD2-203ENST00000460837 TTBK1Q5TCY1 1321 aaPredicted RBP11.43□□□□□ -0.58
PTCD2-203ENST00000460837 C3orf80F5H4A9 247 aa11.43□□□□□ -0.58
PTCD2-203ENST00000460837 OSBPP22059 807 aa11.43□□□□□ -0.58
PTCD2-203ENST00000460837 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
PTCD2-203ENST00000460837 NBPF26B4DH59 902 aa11.42□□□□□ -0.58
PTCD2-203ENST00000460837 CYB5RLQ6IPT4 315 aa11.42□□□□□ -0.58
PTCD2-203ENST00000460837 CDHR5Q9HBB8 845 aa11.42□□□□□ -0.58
PTCD2-203ENST00000460837 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
PTCD2-203ENST00000460837 ATP10BO94823 1461 aa11.4□□□□□ -0.58
PTCD2-203ENST00000460837 HDGFP51858 240 aaKnown RBP11.39□□□□□ -0.59
PTCD2-203ENST00000460837 NUDT18Q6ZVK8 323 aa11.39□□□□□ -0.59
PTCD2-203ENST00000460837 MAPKBP1O60336 1514 aa11.39□□□□□ -0.59
PTCD2-203ENST00000460837 CDK13Q14004 1512 aaKnown RBP11.39□□□□□ -0.59
PTCD2-203ENST00000460837 TJAP1Q5JTD0 557 aa11.37□□□□□ -0.59
PTCD2-203ENST00000460837 RNF40O75150 1001 aa11.36□□□□□ -0.59
PTCD2-203ENST00000460837 ATP1B4Q9UN42 357 aaPredicted RBP11.35□□□□□ -0.59
PTCD2-203ENST00000460837 EHBP1L1Q8N3D4 1523 aa11.35□□□□□ -0.59
PTCD2-203ENST00000460837 Q6ZNB5 142 aa11.34□□□□□ -0.59
PTCD2-203ENST00000460837 MTRQ99707 1265 aa11.34□□□□□ -0.59
PTCD2-203ENST00000460837 RBM27Q9P2N5 1060 aaKnown RBP11.34□□□□□ -0.59
PTCD2-203ENST00000460837 MAGI3Q5TCQ9 1506 aa11.34□□□□□ -0.59
PTCD2-203ENST00000460837 LRRC9Q6ZRR7 1453 aa11.33□□□□□ -0.6
PTCD2-203ENST00000460837 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.33□□□□□ -0.6
PTCD2-203ENST00000460837 CDK11AQ9UQ88 783 aaPredicted RBP11.33□□□□□ -0.6
PTCD2-203ENST00000460837 SUPT6HQ7KZ85 1726 aaKnown RBP11.32□□□□□ -0.6
PTCD2-203ENST00000460837 IL21Q9HBE4 155 aa11.32□□□□□ -0.6
PTCD2-203ENST00000460837 NPDC1Q9NQX5 325 aaPredicted RBP11.32□□□□□ -0.6
PTCD2-203ENST00000460837 TROQ12816 1431 aaPredicted RBP11.32□□□□□ -0.6
PTCD2-203ENST00000460837 ASXL2Q76L83 1435 aa11.32□□□□□ -0.6
PTCD2-203ENST00000460837 WDR7Q9Y4E6 1490 aa11.32□□□□□ -0.6
PTCD2-203ENST00000460837 KIF14Q15058 1648 aa11.31□□□□□ -0.6
PTCD2-203ENST00000460837 PADI6Q6TGC4 694 aa11.31□□□□□ -0.6
PTCD2-203ENST00000460837 KIF13AQ9H1H9 1805 aa11.3□□□□□ -0.6
PTCD2-203ENST00000460837 PLEKHD1A6NEE1 506 aa11.3□□□□□ -0.6
PTCD2-203ENST00000460837 ARID3CA6NKF2 412 aa11.3□□□□□ -0.6
PTCD2-203ENST00000460837 ZNF516Q92618 1163 aa11.3□□□□□ -0.6
PTCD2-203ENST00000460837 ABCA9Q8IUA7 1624 aa11.29□□□□□ -0.6
PTCD2-203ENST00000460837 APLP1P51693 650 aa11.29□□□□□ -0.6
PTCD2-203ENST00000460837 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
PTCD2-203ENST00000460837 TTC13Q8NBP0 860 aa11.29□□□□□ -0.6
PTCD2-203ENST00000460837 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
PTCD2-203ENST00000460837 GLI2P10070 1586 aa11.28□□□□□ -0.6
PTCD2-203ENST00000460837 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
PTCD2-203ENST00000460837 DIP2BQ9P265 1576 aa11.28□□□□□ -0.6
PTCD2-203ENST00000460837 CDC42BPAQ5VT25 1732 aa11.27□□□□□ -0.61
PTCD2-203ENST00000460837 MYO5CQ9NQX4 1742 aa11.27□□□□□ -0.61
PTCD2-203ENST00000460837 KANK4Q5T7N3 995 aaPredicted RBP11.27□□□□□ -0.61
PTCD2-203ENST00000460837 PPP1R18Q6NYC8 613 aa11.27□□□□□ -0.61
PTCD2-203ENST00000460837 ITSN2Q9NZM3 1697 aa11.27□□□□□ -0.61
PTCD2-203ENST00000460837 PRKD2Q9BZL6 878 aa11.26□□□□□ -0.61
PTCD2-203ENST00000460837 MAP3K4Q9Y6R4 1608 aa11.26□□□□□ -0.61
PTCD2-203ENST00000460837 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
PTCD2-203ENST00000460837 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTCD2-203ENST00000460837 TTC37Q6PGP7 1564 aa11.25□□□□□ -0.61
PTCD2-203ENST00000460837 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
PTCD2-203ENST00000460837 TIMELESSQ9UNS1 1208 aa11.25□□□□□ -0.61
PTCD2-203ENST00000460837 NCOA2Q15596 1464 aa11.25□□□□□ -0.61
PTCD2-203ENST00000460837 CDC42BPBQ9Y5S2 1711 aa11.24□□□□□ -0.61
PTCD2-203ENST00000460837 GFRA3O60609 400 aa11.24□□□□□ -0.61
PTCD2-203ENST00000460837 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
PTCD2-203ENST00000460837 LAPTM4AQ15012 233 aa11.24□□□□□ -0.61
PTCD2-203ENST00000460837 NECTIN2Q92692 538 aa11.24□□□□□ -0.61
PTCD2-203ENST00000460837 PREX2Q70Z35 1606 aa11.24□□□□□ -0.61
PTCD2-203ENST00000460837 NKX2-3Q8TAU0 364 aa11.23□□□□□ -0.61
PTCD2-203ENST00000460837 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
PTCD2-203ENST00000460837 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.23□□□□□ -0.61
PTCD2-203ENST00000460837 ARAP3Q8WWN8 1544 aa11.23□□□□□ -0.61
PTCD2-203ENST00000460837 SLC4A3P48751 1232 aa11.22□□□□□ -0.61
PTCD2-203ENST00000460837 COPS2P61201 443 aa11.22□□□□□ -0.61
PTCD2-203ENST00000460837 EYA1Q99502 592 aa11.22□□□□□ -0.61
PTCD2-203ENST00000460837 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
PTCD2-203ENST00000460837 TULP1O00294 542 aaPredicted RBP11.2□□□□□ -0.62
PTCD2-203ENST00000460837 PPRC1Q5VV67 1664 aaKnown RBP11.2□□□□□ -0.62
PTCD2-203ENST00000460837 GPATCH8Q9UKJ3 1502 aaKnown RBP11.19□□□□□ -0.62
PTCD2-203ENST00000460837 TSPOAP1O95153 1857 aa11.19□□□□□ -0.62
PTCD2-203ENST00000460837 SEMA3EO15041 775 aa11.19□□□□□ -0.62
PTCD2-203ENST00000460837 CFAP74Q9C0B2 1584 aa11.19□□□□□ -0.62
PTCD2-203ENST00000460837 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
PTCD2-203ENST00000460837 V9GY48 417 aaPredicted RBP11.18□□□□□ -0.62
PTCD2-203ENST00000460837 PLCH2O75038 1416 aa11.18□□□□□ -0.62
PTCD2-203ENST00000460837 CCNB3Q8WWL7 1395 aa11.17□□□□□ -0.62
PTCD2-203ENST00000460837 CD109Q6YHK3 1445 aa11.17□□□□□ -0.62
PTCD2-203ENST00000460837 MIA2Q96PC5 1412 aa11.17□□□□□ -0.62
PTCD2-203ENST00000460837 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
PTCD2-203ENST00000460837 GGCXP38435 758 aa11.16□□□□□ -0.62
PTCD2-203ENST00000460837 TESPA1A2RU30 521 aaPredicted RBP11.15□□□□□ -0.62
PTCD2-203ENST00000460837 FAM69CQ0P6D2 419 aa11.15□□□□□ -0.62
PTCD2-203ENST00000460837 PTGDRQ13258 359 aa11.15□□□□□ -0.62
PTCD2-203ENST00000460837 TMEM132AQ24JP5 1023 aa11.15□□□□□ -0.62
PTCD2-203ENST00000460837 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
PTCD2-203ENST00000460837 PPARGC1BQ86YN6 1023 aaKnown RBP11.15□□□□□ -0.62
PTCD2-203ENST00000460837 ZC3H15Q8WU90 426 aaKnown RBP11.15□□□□□ -0.62
PTCD2-203ENST00000460837 PTPN23Q9H3S7 1636 aa11.15□□□□□ -0.62
PTCD2-203ENST00000460837 ARHGAP5Q13017 1502 aa11.14□□□□□ -0.63
PTCD2-203ENST00000460837 ZPR1O75312 459 aa11.14□□□□□ -0.63
PTCD2-203ENST00000460837 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms