RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 C6orf229H3BNL8 230 aa10.5□□□□□ -0.73
CCDC50-203ENST00000460064 HRO43593 1189 aa10.5□□□□□ -0.73
CCDC50-203ENST00000460064 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
CCDC50-203ENST00000460064 MTMR14Q8NCE2 650 aa10.5□□□□□ -0.73
CCDC50-203ENST00000460064 TSC1Q92574 1164 aa10.5□□□□□ -0.73
CCDC50-203ENST00000460064 PRM3Q9NNZ6 103 aa10.5□□□□□ -0.73
CCDC50-203ENST00000460064 ZNF777Q9ULD5 760 aaPredicted RBP10.5□□□□□ -0.73
CCDC50-203ENST00000460064 USP17L8P0C7I0 530 aa10.48□□□□□ -0.73
CCDC50-203ENST00000460064 CTDSPL2Q05D32 466 aa10.48□□□□□ -0.73
CCDC50-203ENST00000460064 FNBP4Q8N3X1 1017 aaPredicted RBP10.48□□□□□ -0.73
CCDC50-203ENST00000460064 ANKK1Q8NFD2 765 aa10.48□□□□□ -0.73
CCDC50-203ENST00000460064 PPP4CP60510 307 aa10.47□□□□□ -0.73
CCDC50-203ENST00000460064 PUS10Q3MIT2 529 aaKnown RBP10.47□□□□□ -0.73
CCDC50-203ENST00000460064 SYMPKQ92797 1274 aaKnown RBP10.47□□□□□ -0.73
CCDC50-203ENST00000460064 GDPD2Q9HCC8 539 aa10.47□□□□□ -0.73
CCDC50-203ENST00000460064 ACTN4O43707 911 aaKnown RBP10.46□□□□□ -0.73
CCDC50-203ENST00000460064 HELBQ8NG08 1087 aaPredicted RBP10.46□□□□□ -0.73
CCDC50-203ENST00000460064 PRR14Q9BWN1 585 aa10.45□□□□□ -0.74
CCDC50-203ENST00000460064 ZNF330Q9Y3S2 320 aaPredicted RBP10.45□□□□□ -0.74
CCDC50-203ENST00000460064 CFAP99D6REC4 459 aa10.44□□□□□ -0.74
CCDC50-203ENST00000460064 SOCS7O14512 581 aa10.44□□□□□ -0.74
CCDC50-203ENST00000460064 ABL2P42684 1182 aa10.44□□□□□ -0.74
CCDC50-203ENST00000460064 MORN1Q5T089 497 aa10.44□□□□□ -0.74
CCDC50-203ENST00000460064 WWC1Q8IX03 1113 aa10.44□□□□□ -0.74
CCDC50-203ENST00000460064 SOWAHBA6NEL2 793 aa10.43□□□□□ -0.74
CCDC50-203ENST00000460064 WNT2BQ93097 391 aa10.43□□□□□ -0.74
CCDC50-203ENST00000460064 HPS5Q9UPZ3 1129 aa10.43□□□□□ -0.74
CCDC50-203ENST00000460064 SLC27A5Q9Y2P5 690 aa10.43□□□□□ -0.74
CCDC50-203ENST00000460064 BCAMP50895 628 aa10.42□□□□□ -0.74
CCDC50-203ENST00000460064 PRR7Q8TB68 274 aa10.42□□□□□ -0.74
CCDC50-203ENST00000460064 TSR3Q9UJK0 312 aaKnown RBP10.42□□□□□ -0.74
CCDC50-203ENST00000460064 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
CCDC50-203ENST00000460064 Q3C1V9 767 aa10.41□□□□□ -0.74
CCDC50-203ENST00000460064 CCDC82Q8N4S0 544 aa10.4□□□□□ -0.74
CCDC50-203ENST00000460064 LRRN4Q8WUT4 740 aa10.4□□□□□ -0.74
CCDC50-203ENST00000460064 GJD4Q96KN9 370 aaPredicted RBP10.4□□□□□ -0.74
CCDC50-203ENST00000460064 APLP1P51693 650 aa10.39□□□□□ -0.75
CCDC50-203ENST00000460064 RETREG3Q86VR2 466 aa10.39□□□□□ -0.75
CCDC50-203ENST00000460064 HMX1Q9NP08 348 aaPredicted RBP10.39□□□□□ -0.75
CCDC50-203ENST00000460064 NDUFB9Q9Y6M9 179 aa10.39□□□□□ -0.75
CCDC50-203ENST00000460064 SCUBE3Q8IX30 993 aa10.37□□□□□ -0.75
CCDC50-203ENST00000460064 PCDHB3Q9Y5E6 796 aa10.37□□□□□ -0.75
CCDC50-203ENST00000460064 BLOC1S3Q6QNY0 202 aa10.35□□□□□ -0.75
CCDC50-203ENST00000460064 RNF19BQ6ZMZ0 732 aa10.35□□□□□ -0.75
CCDC50-203ENST00000460064 CCDC97Q96F63 343 aaPredicted RBP10.35□□□□□ -0.75
CCDC50-203ENST00000460064 TRIM34Q9BYJ4 488 aa10.35□□□□□ -0.75
CCDC50-203ENST00000460064 PER1O15534 1290 aaPredicted RBP10.34□□□□□ -0.75
CCDC50-203ENST00000460064 NR1I2O75469 434 aa10.34□□□□□ -0.75
CCDC50-203ENST00000460064 USB1Q9BQ65 265 aaKnown RBP10.34□□□□□ -0.75
CCDC50-203ENST00000460064 PLSCR2Q9NRY7 297 aa10.34□□□□□ -0.75
CCDC50-203ENST00000460064 WBP1LQ9NX94 342 aa10.34□□□□□ -0.75
CCDC50-203ENST00000460064 SERPINA10Q9UK55 444 aa10.34□□□□□ -0.75
CCDC50-203ENST00000460064 SALL2Q9Y467 1007 aaPredicted RBP10.34□□□□□ -0.75
CCDC50-203ENST00000460064 FMNL1O95466 1100 aaPredicted RBP10.33□□□□□ -0.76
CCDC50-203ENST00000460064 DESI1Q6ICB0 168 aa10.33□□□□□ -0.76
CCDC50-203ENST00000460064 BRICD5Q6PL45 260 aa10.33□□□□□ -0.76
CCDC50-203ENST00000460064 EPS8L1Q8TE68 723 aa10.33□□□□□ -0.76
CCDC50-203ENST00000460064 NR6A1Q15406 480 aa10.32□□□□□ -0.76
CCDC50-203ENST00000460064 KRTAP3-3Q9BYR6 98 aa10.32□□□□□ -0.76
CCDC50-203ENST00000460064 KRTAP3-2Q9BYR7 98 aa10.32□□□□□ -0.76
CCDC50-203ENST00000460064 IRF5Q13568 498 aa10.31□□□□□ -0.76
CCDC50-203ENST00000460064 WASHC4Q2M389 1173 aa10.31□□□□□ -0.76
CCDC50-203ENST00000460064 CALR3Q96L12 384 aaKnown RBP10.31□□□□□ -0.76
CCDC50-203ENST00000460064 POM121CA8CG34 1229 aa10.3□□□□□ -0.76
CCDC50-203ENST00000460064 LYPD8Q6UX82 237 aa10.3□□□□□ -0.76
CCDC50-203ENST00000460064 KCTD12Q96CX2 325 aaKnown RBP10.3□□□□□ -0.76
CCDC50-203ENST00000460064 THSD4Q6ZMP0 1018 aa10.29□□□□□ -0.76
CCDC50-203ENST00000460064 THAP11Q96EK4 314 aa10.29□□□□□ -0.76
CCDC50-203ENST00000460064 COPS2P61201 443 aa10.27□□□□□ -0.77
CCDC50-203ENST00000460064 VAC14Q08AM6 782 aa10.27□□□□□ -0.77
CCDC50-203ENST00000460064 HDGFL1Q5TGJ6 251 aa10.27□□□□□ -0.77
CCDC50-203ENST00000460064 GLMNQ92990 594 aa10.27□□□□□ -0.77
CCDC50-203ENST00000460064 SPSB2Q99619 263 aa10.26□□□□□ -0.77
CCDC50-203ENST00000460064 GPR37L1O60883 481 aa10.25□□□□□ -0.77
CCDC50-203ENST00000460064 PNMA1Q8ND90 353 aa10.25□□□□□ -0.77
CCDC50-203ENST00000460064 JUNDP17535 347 aa10.24□□□□□ -0.77
CCDC50-203ENST00000460064 PTPN5P54829 565 aa10.23□□□□□ -0.77
CCDC50-203ENST00000460064 NYAP1Q6ZVC0 841 aa10.23□□□□□ -0.77
CCDC50-203ENST00000460064 CTHP32929 405 aa10.22□□□□□ -0.77
CCDC50-203ENST00000460064 PTPRNQ16849 979 aa10.22□□□□□ -0.77
CCDC50-203ENST00000460064 CDAN1Q8IWY9 1227 aa10.22□□□□□ -0.77
CCDC50-203ENST00000460064 FAM160A2Q8N612 972 aaPredicted RBP10.22□□□□□ -0.77
CCDC50-203ENST00000460064 MSS51Q4VC12 460 aa10.21□□□□□ -0.77
CCDC50-203ENST00000460064 POTEMA6NI47 508 aa10.19□□□□□ -0.78
CCDC50-203ENST00000460064 ZPR1O75312 459 aa10.19□□□□□ -0.78
CCDC50-203ENST00000460064 F12P00748 615 aaPredicted RBP10.19□□□□□ -0.78
CCDC50-203ENST00000460064 ADAMTS19Q8TE59 1207 aa10.19□□□□□ -0.78
CCDC50-203ENST00000460064 MAP10Q9P2G4 905 aa10.19□□□□□ -0.78
CCDC50-203ENST00000460064 FKBPLQ9UIM3 349 aa10.19□□□□□ -0.78
CCDC50-203ENST00000460064 SEMA3FQ13275 785 aa10.18□□□□□ -0.78
CCDC50-203ENST00000460064 MTRQ99707 1265 aa10.18□□□□□ -0.78
CCDC50-203ENST00000460064 ALG2Q9H553 416 aa10.18□□□□□ -0.78
CCDC50-203ENST00000460064 EVA1BQ9NVM1 165 aa10.18□□□□□ -0.78
CCDC50-203ENST00000460064 DXOO77932 396 aaKnown RBP10.17□□□□□ -0.78
CCDC50-203ENST00000460064 CCNYL3P0C7X3 344 aa10.17□□□□□ -0.78
CCDC50-203ENST00000460064 SOX11P35716 441 aa10.17□□□□□ -0.78
CCDC50-203ENST00000460064 MMP16P51512 607 aa10.17□□□□□ -0.78
CCDC50-203ENST00000460064 POTEGQ6S5H5 508 aa10.17□□□□□ -0.78
CCDC50-203ENST00000460064 NUDT12Q9BQG2 462 aa10.17□□□□□ -0.78
CCDC50-203ENST00000460064 EIF4G2P78344 907 aaKnown RBP eCLIP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms