RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 MYBBP1AQ9BQG0 1328 aaKnown RBP10.23□□□□□ -0.77
ERCC3-204ENST00000456257 INSRP06213 1382 aa10.23□□□□□ -0.77
ERCC3-204ENST00000456257 POLR3GLQ9BT43 218 aa10.22□□□□□ -0.77
ERCC3-204ENST00000456257 SLC12A5Q9H2X9 1139 aa10.22□□□□□ -0.77
ERCC3-204ENST00000456257 STK26Q9P289 416 aa10.22□□□□□ -0.77
ERCC3-204ENST00000456257 KNSTRNQ9Y448 316 aa10.22□□□□□ -0.77
ERCC3-204ENST00000456257 NLRP13Q86W25 1043 aa10.21□□□□□ -0.77
ERCC3-204ENST00000456257 ATAD2Q6PL18 1390 aa10.21□□□□□ -0.78
ERCC3-204ENST00000456257 TULP4Q9NRJ4 1543 aa10.21□□□□□ -0.78
ERCC3-204ENST00000456257 WAPLQ7Z5K2 1190 aa10.2□□□□□ -0.78
ERCC3-204ENST00000456257 ANKLE2Q86XL3 938 aa10.2□□□□□ -0.78
ERCC3-204ENST00000456257 POGKQ9P215 609 aa10.2□□□□□ -0.78
ERCC3-204ENST00000456257 MYOM1P52179 1685 aa10.19□□□□□ -0.78
ERCC3-204ENST00000456257 QRICH2Q9H0J4 1663 aa10.19□□□□□ -0.78
ERCC3-204ENST00000456257 PTPRUQ92729 1446 aa10.19□□□□□ -0.78
ERCC3-204ENST00000456257 CDK19Q9BWU1 502 aa10.19□□□□□ -0.78
ERCC3-204ENST00000456257 MRS2Q9HD23 443 aa10.19□□□□□ -0.78
ERCC3-204ENST00000456257 DIP2AQ14689 1571 aa10.18□□□□□ -0.78
ERCC3-204ENST00000456257 CEP170BQ9Y4F5 1589 aaPredicted RBP10.18□□□□□ -0.78
ERCC3-204ENST00000456257 CPS1P31327 1500 aa10.18□□□□□ -0.78
ERCC3-204ENST00000456257 ANKRD36BQ8N2N9 1353 aa10.18□□□□□ -0.78
ERCC3-204ENST00000456257 WASLO00401 505 aaPredicted RBP10.18□□□□□ -0.78
ERCC3-204ENST00000456257 KNDC1Q76NI1 1749 aa10.18□□□□□ -0.78
ERCC3-204ENST00000456257 ROBO2Q9HCK4 1378 aa10.17□□□□□ -0.78
ERCC3-204ENST00000456257 PLEKHH1Q9ULM0 1364 aa10.17□□□□□ -0.78
ERCC3-204ENST00000456257 TMC1Q8TDI8 760 aa10.17□□□□□ -0.78
ERCC3-204ENST00000456257 ZNF142P52746 1687 aaPredicted RBP10.17□□□□□ -0.78
ERCC3-204ENST00000456257 RIMS1Q86UR5 1692 aaKnown RBP10.17□□□□□ -0.78
ERCC3-204ENST00000456257 PTCH1Q13635 1447 aa10.16□□□□□ -0.78
ERCC3-204ENST00000456257 MINK1Q8N4C8 1332 aaPredicted RBP10.16□□□□□ -0.78
ERCC3-204ENST00000456257 PPP2R1AP30153 589 aa10.16□□□□□ -0.78
ERCC3-204ENST00000456257 SLC26A8Q96RN1 970 aa10.16□□□□□ -0.78
ERCC3-204ENST00000456257 CABP2Q9NPB3 220 aa10.16□□□□□ -0.78
ERCC3-204ENST00000456257 AMOTL2Q9Y2J4 779 aa10.16□□□□□ -0.78
ERCC3-204ENST00000456257 NSD2O96028 1365 aa10.15□□□□□ -0.78
ERCC3-204ENST00000456257 PLEKHG3A1L390 1219 aa10.15□□□□□ -0.78
ERCC3-204ENST00000456257 TERF2IPQ9NYB0 399 aa10.15□□□□□ -0.78
ERCC3-204ENST00000456257 DMRT2Q9Y5R5 561 aa10.15□□□□□ -0.78
ERCC3-204ENST00000456257 CCDC61Q9Y6R9 512 aa10.15□□□□□ -0.78
ERCC3-204ENST00000456257 CD163L1Q9NR16 1453 aa10.15□□□□□ -0.78
ERCC3-204ENST00000456257 CPSF1Q10570 1443 aaKnown RBP10.15□□□□□ -0.79
ERCC3-204ENST00000456257 CC2D1BQ5T0F9 858 aaKnown RBP10.14□□□□□ -0.79
ERCC3-204ENST00000456257 YTHDC1Q96MU7 727 aaKnown RBP10.14□□□□□ -0.79
ERCC3-204ENST00000456257 USP32Q8NFA0 1604 aa10.14□□□□□ -0.79
ERCC3-204ENST00000456257 CGNL1Q0VF96 1302 aa10.13□□□□□ -0.79
ERCC3-204ENST00000456257 SRPK2P78362 688 aaKnown RBP10.13□□□□□ -0.79
ERCC3-204ENST00000456257 SAFB2Q14151 953 aaKnown RBP eCLIP10.13□□□□□ -0.79
ERCC3-204ENST00000456257 NUDT16Q96DE0 195 aaKnown RBP10.13□□□□□ -0.79
ERCC3-204ENST00000456257 ZNF692Q9BU19 519 aaPredicted RBP10.13□□□□□ -0.79
ERCC3-204ENST00000456257 CABP1Q9NZU7 370 aa10.13□□□□□ -0.79
ERCC3-204ENST00000456257 ADGRB2O60241 1585 aa10.13□□□□□ -0.79
ERCC3-204ENST00000456257 KDM4FA0A1W2PPD8 638 aa10.12□□□□□ -0.79
ERCC3-204ENST00000456257 FYB1O15117 783 aa10.12□□□□□ -0.79
ERCC3-204ENST00000456257 ATP7BP35670 1465 aa10.11□□□□□ -0.79
ERCC3-204ENST00000456257 NSD3Q9BZ95 1437 aa10.11□□□□□ -0.79
ERCC3-204ENST00000456257 KCNA6P17658 529 aa10.11□□□□□ -0.79
ERCC3-204ENST00000456257 BCANQ96GW7 911 aa10.11□□□□□ -0.79
ERCC3-204ENST00000456257 A0A1W2PP64 1363 aa10.11□□□□□ -0.79
ERCC3-204ENST00000456257 POLR3AO14802 1390 aaPredicted RBP10.11□□□□□ -0.79
ERCC3-204ENST00000456257 XRN1Q8IZH2 1706 aaKnown RBP10.1□□□□□ -0.79
ERCC3-204ENST00000456257 ZBED9Q6R2W3 1325 aa10.1□□□□□ -0.79
ERCC3-204ENST00000456257 PRR36Q9H6K5 1346 aa10.1□□□□□ -0.79
ERCC3-204ENST00000456257 HDGFL2Q7Z4V5 671 aaPredicted RBP10.1□□□□□ -0.79
ERCC3-204ENST00000456257 SCAF1Q9H7N4 1312 aaKnown RBP10.09□□□□□ -0.79
ERCC3-204ENST00000456257 NPHP4O75161 1426 aaPredicted RBP10.09□□□□□ -0.79
ERCC3-204ENST00000456257 FAM9BQ8IZU0 186 aa10.09□□□□□ -0.79
ERCC3-204ENST00000456257 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.09□□□□□ -0.79
ERCC3-204ENST00000456257 CDC42BPGQ6DT37 1551 aa10.09□□□□□ -0.79
ERCC3-204ENST00000456257 HNRNPUQ00839 825 aaKnown RBP eCLIP10.08□□□□□ -0.8
ERCC3-204ENST00000456257 NCBP3Q53F19 620 aaKnown RBP10.08□□□□□ -0.8
ERCC3-204ENST00000456257 MORC1Q86VD1 984 aa10.08□□□□□ -0.8
ERCC3-204ENST00000456257 NGEFQ8N5V2 710 aa10.08□□□□□ -0.8
ERCC3-204ENST00000456257 EDC4Q6P2E9 1401 aaKnown RBP10.07□□□□□ -0.8
ERCC3-204ENST00000456257 SSH2Q76I76 1423 aa10.07□□□□□ -0.8
ERCC3-204ENST00000456257 PNPLA6Q8IY17 1366 aa10.07□□□□□ -0.8
ERCC3-204ENST00000456257 ANKARQ7Z5J8 1434 aa10.07□□□□□ -0.8
ERCC3-204ENST00000456257 NCOA3Q9Y6Q9 1424 aa10.07□□□□□ -0.8
ERCC3-204ENST00000456257 CHD2O14647 1828 aaKnown RBP10.06□□□□□ -0.8
ERCC3-204ENST00000456257 ADAMTS8Q9UP79 889 aa10.06□□□□□ -0.8
ERCC3-204ENST00000456257 NCKAP5LQ9HCH0 1330 aa10.06□□□□□ -0.8
ERCC3-204ENST00000456257 BLMP54132 1417 aaPredicted RBP10.05□□□□□ -0.8
ERCC3-204ENST00000456257 PPIP5K1Q6PFW1 1433 aa10.05□□□□□ -0.8
ERCC3-204ENST00000456257 AATKQ6ZMQ8 1374 aa10.04□□□□□ -0.8
ERCC3-204ENST00000456257 MTHFSP49914 203 aa10.04□□□□□ -0.8
ERCC3-204ENST00000456257 PDE3BQ13370 1112 aa10.03□□□□□ -0.8
ERCC3-204ENST00000456257 ACEP12821 1306 aa10.03□□□□□ -0.8
ERCC3-204ENST00000456257 NWD1Q149M9 1564 aa10.02□□□□□ -0.81
ERCC3-204ENST00000456257 TTC21BQ7Z4L5 1316 aa10.02□□□□□ -0.81
ERCC3-204ENST00000456257 TTC21AQ8NDW8 1320 aa10.02□□□□□ -0.81
ERCC3-204ENST00000456257 ZNF521Q96K83 1311 aa10.02□□□□□ -0.81
ERCC3-204ENST00000456257 USP31Q70CQ4 1352 aa10.01□□□□□ -0.81
ERCC3-204ENST00000456257 USP6P35125 1406 aa10.01□□□□□ -0.81
ERCC3-204ENST00000456257 ADGRL3Q9HAR2 1447 aa10.01□□□□□ -0.81
ERCC3-204ENST00000456257 CNGB1Q14028 1251 aaPredicted RBP10.01□□□□□ -0.81
ERCC3-204ENST00000456257 GGNBP2Q9H3C7 697 aa10.01□□□□□ -0.81
ERCC3-204ENST00000456257 POLKQ9UBT6 870 aa10.01□□□□□ -0.81
ERCC3-204ENST00000456257 SMG6Q86US8 1419 aaKnown RBP10□□□□□ -0.81
ERCC3-204ENST00000456257 TOPAZ1Q8N9V7 1692 aa10□□□□□ -0.81
ERCC3-204ENST00000456257 NKTRP30414 1462 aaKnown RBP9.99□□□□□ -0.81
ERCC3-204ENST00000456257 WDR43Q15061 677 aaKnown RBP eCLIP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms