RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 SASS6Q6UVJ0 657 aa14.59□□□□□ -0.07
SEC16A-207ENST00000453963 TTC5Q8N0Z6 440 aa14.59□□□□□ -0.07
SEC16A-207ENST00000453963 NEXNQ0ZGT2 675 aa14.59□□□□□ -0.07
SEC16A-207ENST00000453963 TPD52L1Q16890 204 aaPredicted RBP14.59□□□□□ -0.07
SEC16A-207ENST00000453963 TMEM132EQ6IEE7 984 aa14.59□□□□□ -0.07
SEC16A-207ENST00000453963 VPS37CA5D8V6 355 aaPredicted RBP14.58□□□□□ -0.07
SEC16A-207ENST00000453963 TCP11L2Q8N4U5 519 aa14.58□□□□□ -0.07
SEC16A-207ENST00000453963 SETQ01105 290 aaPredicted RBP14.58□□□□□ -0.08
SEC16A-207ENST00000453963 RABEP1Q15276 862 aa14.58□□□□□ -0.08
SEC16A-207ENST00000453963 MCM2P49736 904 aa14.58□□□□□ -0.08
SEC16A-207ENST00000453963 HMGN5P82970 282 aaKnown RBP14.58□□□□□ -0.08
SEC16A-207ENST00000453963 HSP90AB4PQ58FF6 505 aa14.58□□□□□ -0.08
SEC16A-207ENST00000453963 MRC2Q9UBG0 1479 aa14.58□□□□□ -0.08
SEC16A-207ENST00000453963 ARHGAP5Q13017 1502 aa14.58□□□□□ -0.08
SEC16A-207ENST00000453963 LETM1O95202 739 aaPredicted RBP14.58□□□□□ -0.08
SEC16A-207ENST00000453963 AKAP17AQ02040 695 aaKnown RBP14.58□□□□□ -0.08
SEC16A-207ENST00000453963 HOMER1Q86YM7 354 aa14.58□□□□□ -0.08
SEC16A-207ENST00000453963 IFT57Q9NWB7 429 aa14.58□□□□□ -0.08
SEC16A-207ENST00000453963 IFIT2P09913 472 aaKnown RBP14.57□□□□□ -0.08
SEC16A-207ENST00000453963 CCDC70Q6NSX1 233 aa14.57□□□□□ -0.08
SEC16A-207ENST00000453963 CAVIN1Q6NZI2 390 aaKnown RBP14.57□□□□□ -0.08
SEC16A-207ENST00000453963 ARGLU1Q9NWB6 273 aaPredicted RBP14.57□□□□□ -0.08
SEC16A-207ENST00000453963 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
SEC16A-207ENST00000453963 EIF2S2P20042 333 aaKnown RBP14.57□□□□□ -0.08
SEC16A-207ENST00000453963 MSH5O43196 834 aa14.56□□□□□ -0.08
SEC16A-207ENST00000453963 GGNBP2Q9H3C7 697 aa14.56□□□□□ -0.08
SEC16A-207ENST00000453963 HFM1A2PYH4 1435 aa14.56□□□□□ -0.08
SEC16A-207ENST00000453963 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
SEC16A-207ENST00000453963 CFAP70Q5T0N1 1121 aa14.56□□□□□ -0.08
SEC16A-207ENST00000453963 SYNE3Q6ZMZ3 975 aa14.56□□□□□ -0.08
SEC16A-207ENST00000453963 C9orf78Q9NZ63 289 aaPredicted RBP14.56□□□□□ -0.08
SEC16A-207ENST00000453963 RNF214Q8ND24 703 aa14.55□□□□□ -0.08
SEC16A-207ENST00000453963 GCC1Q96CN9 775 aa14.55□□□□□ -0.08
SEC16A-207ENST00000453963 ATF3P18847 181 aa14.55□□□□□ -0.08
SEC16A-207ENST00000453963 FKBP5Q13451 457 aaPredicted RBP14.55□□□□□ -0.08
SEC16A-207ENST00000453963 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.55□□□□□ -0.08
SEC16A-207ENST00000453963 CCDC73Q6ZRK6 1079 aa14.55□□□□□ -0.08
SEC16A-207ENST00000453963 ERC2O15083 957 aa14.54□□□□□ -0.08
SEC16A-207ENST00000453963 GRPEL1Q9HAV7 217 aa14.54□□□□□ -0.08
SEC16A-207ENST00000453963 CABP2Q9NPB3 220 aa14.54□□□□□ -0.08
SEC16A-207ENST00000453963 TOPBP1Q92547 1522 aa14.54□□□□□ -0.08
SEC16A-207ENST00000453963 PES1O00541 588 aaKnown RBP14.54□□□□□ -0.08
SEC16A-207ENST00000453963 CCDC184Q52MB2 194 aa14.54□□□□□ -0.08
SEC16A-207ENST00000453963 CIZ1Q9ULV3 898 aaPredicted RBP14.54□□□□□ -0.08
SEC16A-207ENST00000453963 SYNJ1O43426 1573 aa14.54□□□□□ -0.08
SEC16A-207ENST00000453963 MTHFSP49914 203 aa14.53□□□□□ -0.08
SEC16A-207ENST00000453963 HOOK1Q9UJC3 728 aaKnown RBP14.53□□□□□ -0.08
SEC16A-207ENST00000453963 WDR97A6NE52 1622 aa14.53□□□□□ -0.08
SEC16A-207ENST00000453963 CWC22Q9HCG8 908 aaKnown RBP14.53□□□□□ -0.08
SEC16A-207ENST00000453963 CT47B1P0C2W7 299 aaPredicted RBP14.53□□□□□ -0.08
SEC16A-207ENST00000453963 MCM4P33991 863 aa14.53□□□□□ -0.08
SEC16A-207ENST00000453963 VPS53Q5VIR6 699 aa14.53□□□□□ -0.08
SEC16A-207ENST00000453963 TSPY26PQ9H489 355 aa14.53□□□□□ -0.08
SEC16A-207ENST00000453963 CPLX1O14810 134 aa14.53□□□□□ -0.08
SEC16A-207ENST00000453963 RAPGEF4Q8WZA2 1011 aa14.53□□□□□ -0.08
SEC16A-207ENST00000453963 PRXQ9BXM0 1461 aa14.53□□□□□ -0.08
SEC16A-207ENST00000453963 IPO7O95373 1038 aaKnown RBP14.52□□□□□ -0.08
SEC16A-207ENST00000453963 TRIM29Q14134 588 aa14.52□□□□□ -0.08
SEC16A-207ENST00000453963 POLA1P09884 1462 aaPredicted RBP14.52□□□□□ -0.08
SEC16A-207ENST00000453963 SCAPERQ9BY12 1400 aa14.52□□□□□ -0.08
SEC16A-207ENST00000453963 PRPF40AO75400 957 aaKnown RBP14.52□□□□□ -0.08
SEC16A-207ENST00000453963 MNS1Q8NEH6 495 aa14.52□□□□□ -0.08
SEC16A-207ENST00000453963 BCAR3O75815 825 aa14.52□□□□□ -0.09
SEC16A-207ENST00000453963 NLRP6P59044 892 aa14.52□□□□□ -0.09
SEC16A-207ENST00000453963 ANKRD20A12PQ8NF67 263 aa14.52□□□□□ -0.09
SEC16A-207ENST00000453963 DDX58O95786 925 aaKnown RBP14.51□□□□□ -0.09
SEC16A-207ENST00000453963 G3BP1Q13283 466 aaKnown RBP eCLIP14.51□□□□□ -0.092e-6■■■■□ 19.7
SEC16A-207ENST00000453963 TXNDC2Q86VQ3 553 aa14.51□□□□□ -0.09
SEC16A-207ENST00000453963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.51□□□□□ -0.099e-8■□□□□ 8.7
SEC16A-207ENST00000453963 KIAA1107Q9UPP5 1409 aa14.51□□□□□ -0.09
SEC16A-207ENST00000453963 ESPNB1AK53 854 aa14.51□□□□□ -0.09
SEC16A-207ENST00000453963 HMOX1P09601 288 aa14.51□□□□□ -0.09
SEC16A-207ENST00000453963 NECTIN2Q92692 538 aa14.51□□□□□ -0.09
SEC16A-207ENST00000453963 TROQ12816 1431 aaPredicted RBP14.5□□□□□ -0.09
SEC16A-207ENST00000453963 RRP9O43818 475 aaKnown RBP14.5□□□□□ -0.09
SEC16A-207ENST00000453963 NEK4P51957 841 aa14.5□□□□□ -0.09
SEC16A-207ENST00000453963 EXOSC9Q06265 439 aaKnown RBP14.5□□□□□ -0.09
SEC16A-207ENST00000453963 PDE4CQ08493 712 aa14.5□□□□□ -0.09
SEC16A-207ENST00000453963 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
SEC16A-207ENST00000453963 SYTL4Q96C24 671 aaPredicted RBP14.5□□□□□ -0.09
SEC16A-207ENST00000453963 NAT10Q9H0A0 1025 aaKnown RBP14.5□□□□□ -0.09
SEC16A-207ENST00000453963 K7ELQ4 463 aaPredicted RBP14.49□□□□□ -0.09
SEC16A-207ENST00000453963 WDR63Q8IWG1 891 aa14.49□□□□□ -0.09
SEC16A-207ENST00000453963 EFCAB5A4FU69 1503 aa14.49□□□□□ -0.09
SEC16A-207ENST00000453963 PKNOX2Q96KN3 472 aa14.49□□□□□ -0.09
SEC16A-207ENST00000453963 TSPYL4Q9UJ04 414 aa14.49□□□□□ -0.09
SEC16A-207ENST00000453963 ACBD3Q9H3P7 528 aa14.49□□□□□ -0.09
SEC16A-207ENST00000453963 NLRP2Q9NX02 1062 aa14.49□□□□□ -0.09
SEC16A-207ENST00000453963 CC2D2AQ9P2K1 1620 aa14.48□□□□□ -0.09
SEC16A-207ENST00000453963 C9orf84Q5VXU9 1444 aa14.48□□□□□ -0.09
SEC16A-207ENST00000453963 PSMA5P28066 241 aa14.48□□□□□ -0.09
SEC16A-207ENST00000453963 AMOTL1Q8IY63 956 aa14.48□□□□□ -0.09
SEC16A-207ENST00000453963 GNAI3P08754 354 aa14.48□□□□□ -0.09
SEC16A-207ENST00000453963 PDCP20941 246 aa14.48□□□□□ -0.09
SEC16A-207ENST00000453963 PLEKHH2Q8IVE3 1493 aa14.48□□□□□ -0.09
SEC16A-207ENST00000453963 CCDC66A2RUB6 948 aa14.48□□□□□ -0.09
SEC16A-207ENST00000453963 NUTM2GQ5VZR2 741 aa14.47□□□□□ -0.09
SEC16A-207ENST00000453963 NOL10Q9BSC4 688 aaKnown RBP14.47□□□□□ -0.09
SEC16A-207ENST00000453963 TRIM5Q9C035 493 aa14.47□□□□□ -0.09
SEC16A-207ENST00000453963 SLC52A1Q9NWF4 448 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms