RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 KRI1Q8N9T8 703 aaKnown RBP6.31□□□□□ -1.4
EPHA3-202ENST00000452448 RBM27Q9P2N5 1060 aaKnown RBP6.31□□□□□ -1.4
EPHA3-202ENST00000452448 CEP164Q9UPV0 1460 aa6.31□□□□□ -1.4
EPHA3-202ENST00000452448 WRNQ14191 1432 aaPredicted RBP eCLIP6.31□□□□□ -1.4
EPHA3-202ENST00000452448 DHX16O60231 1041 aaKnown RBP6.31□□□□□ -1.4
EPHA3-202ENST00000452448 ANKRD13AQ8IZ07 590 aa6.31□□□□□ -1.4
EPHA3-202ENST00000452448 TSPAN18Q96SJ8 248 aa6.31□□□□□ -1.4
EPHA3-202ENST00000452448 PPME1Q9Y570 386 aa6.31□□□□□ -1.4
EPHA3-202ENST00000452448 GOLGA6CA6NDK9 693 aa6.3□□□□□ -1.4
EPHA3-202ENST00000452448 GOLGA6BA6NDN3 693 aa6.3□□□□□ -1.4
EPHA3-202ENST00000452448 GOLGA6DP0CG33 693 aa6.3□□□□□ -1.4
EPHA3-202ENST00000452448 SCP2P22307 547 aa6.3□□□□□ -1.4
EPHA3-202ENST00000452448 SSFA2P28290 1259 aa6.3□□□□□ -1.4
EPHA3-202ENST00000452448 CYB5RLQ6IPT4 315 aa6.3□□□□□ -1.4
EPHA3-202ENST00000452448 RNF217Q8TC41 542 aa6.3□□□□□ -1.4
EPHA3-202ENST00000452448 MTA3Q9BTC8 594 aa6.3□□□□□ -1.4
EPHA3-202ENST00000452448 GOLGA6AQ9NYA3 693 aa6.3□□□□□ -1.4
EPHA3-202ENST00000452448 SSR1P43307 286 aaKnown RBP6.3□□□□□ -1.4
EPHA3-202ENST00000452448 ARHGEF1Q92888 912 aaKnown RBP6.3□□□□□ -1.4
EPHA3-202ENST00000452448 NRDCO43847 1150 aa6.29□□□□□ -1.4
EPHA3-202ENST00000452448 SLC20A2Q08357 652 aa6.29□□□□□ -1.4
EPHA3-202ENST00000452448 MCM6Q14566 821 aa6.29□□□□□ -1.4
EPHA3-202ENST00000452448 ATL2Q8NHH9 583 aa6.29□□□□□ -1.4
EPHA3-202ENST00000452448 EEA1Q15075 1411 aa6.29□□□□□ -1.4
EPHA3-202ENST00000452448 KIF20AO95235 890 aa6.29□□□□□ -1.4
EPHA3-202ENST00000452448 SATB1Q01826 763 aa6.29□□□□□ -1.4
EPHA3-202ENST00000452448 LMOD3Q0VAK6 560 aa6.29□□□□□ -1.4
EPHA3-202ENST00000452448 SDR16C5Q8N3Y7 309 aa6.29□□□□□ -1.4
EPHA3-202ENST00000452448 RRAGDQ9NQL2 400 aaPredicted RBP6.29□□□□□ -1.4
EPHA3-202ENST00000452448 RAI14Q9P0K7 980 aa6.29□□□□□ -1.4
EPHA3-202ENST00000452448 ARAP1Q96P48 1450 aa6.29□□□□□ -1.4
EPHA3-202ENST00000452448 HDAC1Q13547 482 aaPredicted RBP6.28□□□□□ -1.4
EPHA3-202ENST00000452448 GET4Q7L5D6 327 aaPredicted RBP6.28□□□□□ -1.4
EPHA3-202ENST00000452448 FNBP4Q8N3X1 1017 aaPredicted RBP6.28□□□□□ -1.4
EPHA3-202ENST00000452448 SUGT1Q9Y2Z0 365 aa6.28□□□□□ -1.4
EPHA3-202ENST00000452448 SMARCA4P51532 1647 aa6.28□□□□□ -1.4
EPHA3-202ENST00000452448 WIZO95785 1651 aa6.28□□□□□ -1.4
EPHA3-202ENST00000452448 IFT140Q96RY7 1462 aa6.28□□□□□ -1.4
EPHA3-202ENST00000452448 TTLL13PA6NNM8 815 aa6.28□□□□□ -1.4
EPHA3-202ENST00000452448 TPM2P07951 284 aa6.28□□□□□ -1.4
EPHA3-202ENST00000452448 CT47B1P0C2W7 299 aaPredicted RBP6.28□□□□□ -1.4
EPHA3-202ENST00000452448 MTA1Q13330 715 aa6.28□□□□□ -1.4
EPHA3-202ENST00000452448 GORABQ5T7V8 394 aa6.28□□□□□ -1.4
EPHA3-202ENST00000452448 ERCC6L2Q5T890 1561 aa6.27□□□□□ -1.4
EPHA3-202ENST00000452448 TOP2AP11388 1531 aaKnown RBP6.27□□□□□ -1.41
EPHA3-202ENST00000452448 CARNS1A5YM72 827 aa6.27□□□□□ -1.41
EPHA3-202ENST00000452448 DDX46Q7L014 1031 aaKnown RBP6.27□□□□□ -1.41
EPHA3-202ENST00000452448 CREBRFQ8IUR6 639 aa6.27□□□□□ -1.41
EPHA3-202ENST00000452448 KIAA1522Q9P206 1035 aaPredicted RBP6.27□□□□□ -1.41
EPHA3-202ENST00000452448 ANKRD23Q86SG2 305 aa6.27□□□□□ -1.41
EPHA3-202ENST00000452448 SIRT1Q96EB6 747 aa6.27□□□□□ -1.41
EPHA3-202ENST00000452448 BMP2KQ9NSY1 1161 aaPredicted RBP6.27□□□□□ -1.41
EPHA3-202ENST00000452448 ANKRD62A6NC57 917 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 RHBDL3P58872 404 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 KRBA2Q6ZNG9 492 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 PIK3R5Q8WYR1 880 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 MAP7D2Q96T17 732 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 PLSCR2Q9NRY7 297 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 EMILIN3Q9NT22 766 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 MRVI1Q9Y6F6 885 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 PEX14O75381 377 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 ITGAEP38570 1179 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 E2F4Q16254 413 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 ZNF280DQ6N043 979 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 BORCS6Q96GS4 357 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 TRIM35Q9UPQ4 493 aa6.26□□□□□ -1.41
EPHA3-202ENST00000452448 ANP32CO43423 234 aa6.25□□□□□ -1.41
EPHA3-202ENST00000452448 ZKSCAN8Q15776 578 aaPredicted RBP6.25□□□□□ -1.41
EPHA3-202ENST00000452448 MSL3Q8N5Y2 521 aaKnown RBP6.25□□□□□ -1.41
EPHA3-202ENST00000452448 CCDC181Q5TID7 509 aa6.25□□□□□ -1.41
EPHA3-202ENST00000452448 TNIKQ9UKE5 1360 aa6.25□□□□□ -1.41
EPHA3-202ENST00000452448 ERBB3P21860 1342 aa6.24□□□□□ -1.41
EPHA3-202ENST00000452448 IPO8O15397 1037 aaKnown RBP6.24□□□□□ -1.41
EPHA3-202ENST00000452448 KIF4AO95239 1232 aa6.24□□□□□ -1.41
EPHA3-202ENST00000452448 ZBTB9Q96C00 473 aa6.24□□□□□ -1.41
EPHA3-202ENST00000452448 PPP1R1BQ9UD71 204 aaPredicted RBP6.24□□□□□ -1.41
EPHA3-202ENST00000452448 PNMA2Q9UL42 364 aa6.24□□□□□ -1.41
EPHA3-202ENST00000452448 IVNS1ABPQ9Y6Y0 642 aa6.24□□□□□ -1.41
EPHA3-202ENST00000452448 LETM1O95202 739 aaPredicted RBP6.24□□□□□ -1.41
EPHA3-202ENST00000452448 SETDB1Q15047 1291 aa6.24□□□□□ -1.41
EPHA3-202ENST00000452448 ZNF662Q6ZS27 426 aa6.24□□□□□ -1.41
EPHA3-202ENST00000452448 PROCA1Q8NCQ7 364 aaPredicted RBP6.24□□□□□ -1.41
EPHA3-202ENST00000452448 FBXO41Q8TF61 875 aa6.24□□□□□ -1.41
EPHA3-202ENST00000452448 CRISPLD2Q9H0B8 497 aa6.24□□□□□ -1.41
EPHA3-202ENST00000452448 BSDC1Q9NW68 430 aaPredicted RBP6.24□□□□□ -1.41
EPHA3-202ENST00000452448 EPB41L2O43491 1005 aaKnown RBP6.23□□□□□ -1.41
EPHA3-202ENST00000452448 PPFIA4O75335 1185 aa6.23□□□□□ -1.41
EPHA3-202ENST00000452448 DPYSL4O14531 572 aa6.23□□□□□ -1.41
EPHA3-202ENST00000452448 FOSBP53539 338 aa6.23□□□□□ -1.41
EPHA3-202ENST00000452448 ATN1P54259 1190 aaPredicted RBP6.23□□□□□ -1.41
EPHA3-202ENST00000452448 KCNA1Q09470 495 aa6.23□□□□□ -1.41
EPHA3-202ENST00000452448 DSG2Q14126 1118 aa6.23□□□□□ -1.41
EPHA3-202ENST00000452448 TMEM92Q6UXU6 159 aa6.23□□□□□ -1.41
EPHA3-202ENST00000452448 CALR3Q96L12 384 aaKnown RBP6.23□□□□□ -1.41
EPHA3-202ENST00000452448 DRC1Q96MC2 740 aa6.23□□□□□ -1.41
EPHA3-202ENST00000452448 ZC3H4Q9UPT8 1303 aaKnown RBP6.22□□□□□ -1.41
EPHA3-202ENST00000452448 ABCC8Q09428 1581 aa6.22□□□□□ -1.41
EPHA3-202ENST00000452448 ERCC3P19447 782 aa6.22□□□□□ -1.41
EPHA3-202ENST00000452448 CLCN1P35523 988 aa6.22□□□□□ -1.41
EPHA3-202ENST00000452448 NLRP6P59044 892 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms