RNA–Protein interactions for RNA: ENST00000451744.1

LINC00458-203, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best)

Gene LINC00458, Length 1,020 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-203ENST00000451744 FMNL1O95466 1100 aaPredicted RBP11.3□□□□□ -0.6
LINC00458-203ENST00000451744 FOXC1Q12948 553 aa11.3□□□□□ -0.6
LINC00458-203ENST00000451744 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
LINC00458-203ENST00000451744 FCF1Q9Y324 198 aaKnown RBP11.3□□□□□ -0.6
LINC00458-203ENST00000451744 FAM160A2Q8N612 972 aaPredicted RBP11.29□□□□□ -0.6
LINC00458-203ENST00000451744 PKD2L1Q9P0L9 805 aa11.29□□□□□ -0.6
LINC00458-203ENST00000451744 PRDM9Q9NQV7 894 aa11.28□□□□□ -0.6
LINC00458-203ENST00000451744 KDM2AQ9Y2K7 1162 aa11.28□□□□□ -0.6
LINC00458-203ENST00000451744 ZNF775Q96BV0 537 aaPredicted RBP11.27□□□□□ -0.61
LINC00458-203ENST00000451744 RPIAP49247 311 aa11.26□□□□□ -0.61
LINC00458-203ENST00000451744 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
LINC00458-203ENST00000451744 POTECB2RU33 542 aa11.25□□□□□ -0.61
LINC00458-203ENST00000451744 NESP48681 1621 aa11.24□□□□□ -0.61
LINC00458-203ENST00000451744 ST8SIA5O15466 376 aa11.24□□□□□ -0.61
LINC00458-203ENST00000451744 BRICD5Q6PL45 260 aa11.24□□□□□ -0.61
LINC00458-203ENST00000451744 RNF19BQ6ZMZ0 732 aa11.24□□□□□ -0.61
LINC00458-203ENST00000451744 SALL2Q9Y467 1007 aaPredicted RBP11.24□□□□□ -0.61
LINC00458-203ENST00000451744 LMOD2Q6P5Q4 547 aa11.23□□□□□ -0.61
LINC00458-203ENST00000451744 CD2BP2O95400 341 aaKnown RBP11.22□□□□□ -0.61
LINC00458-203ENST00000451744 GRIPAP1Q4V328 841 aa11.21□□□□□ -0.61
LINC00458-203ENST00000451744 MAP2K5Q13163 448 aa11.2□□□□□ -0.62
LINC00458-203ENST00000451744 MSS51Q4VC12 460 aa11.2□□□□□ -0.62
LINC00458-203ENST00000451744 AAASQ9NRG9 546 aa11.2□□□□□ -0.62
LINC00458-203ENST00000451744 CD46P15529 392 aa11.19□□□□□ -0.62
LINC00458-203ENST00000451744 TOR4AQ9NXH8 423 aa11.18□□□□□ -0.62
LINC00458-203ENST00000451744 CYP4X1Q8N118 509 aa11.17□□□□□ -0.62
LINC00458-203ENST00000451744 TOP2AP11388 1531 aaKnown RBP11.17□□□□□ -0.62
LINC00458-203ENST00000451744 IRF6O14896 467 aa11.16□□□□□ -0.62
LINC00458-203ENST00000451744 ZBTB24O43167 697 aaPredicted RBP11.16□□□□□ -0.62
LINC00458-203ENST00000451744 MDM2Q00987 491 aaPredicted RBP11.16□□□□□ -0.62
LINC00458-203ENST00000451744 Q3C1V9 767 aa11.16□□□□□ -0.62
LINC00458-203ENST00000451744 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
LINC00458-203ENST00000451744 KDM4AO75164 1064 aa11.15□□□□□ -0.62
LINC00458-203ENST00000451744 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
LINC00458-203ENST00000451744 HLA-CQ95604 372 aa11.14□□□□□ -0.63
LINC00458-203ENST00000451744 DACH1Q9UI36 760 aa11.13□□□□□ -0.63
LINC00458-203ENST00000451744 MMP16P51512 607 aa11.12□□□□□ -0.63
LINC00458-203ENST00000451744 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
LINC00458-203ENST00000451744 TTC24A2A3L6 582 aaPredicted RBP11.11□□□□□ -0.63
LINC00458-203ENST00000451744 AVPP01185 164 aa11.11□□□□□ -0.63
LINC00458-203ENST00000451744 USB1Q9BQ65 265 aaKnown RBP11.11□□□□□ -0.63
LINC00458-203ENST00000451744 MINK1Q8N4C8 1332 aaPredicted RBP11.1□□□□□ -0.63
LINC00458-203ENST00000451744 TRIM32Q13049 653 aa11.1□□□□□ -0.63
LINC00458-203ENST00000451744 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
LINC00458-203ENST00000451744 ERCC6Q03468 1493 aa11.09□□□□□ -0.63
LINC00458-203ENST00000451744 AXIN1O15169 862 aa11.09□□□□□ -0.63
LINC00458-203ENST00000451744 DXOO77932 396 aaKnown RBP11.09□□□□□ -0.63
LINC00458-203ENST00000451744 LAMC3Q9Y6N6 1575 aa11.08□□□□□ -0.64
LINC00458-203ENST00000451744 WNT7AO00755 349 aa11.08□□□□□ -0.64
LINC00458-203ENST00000451744 USP46P62068 366 aa11.08□□□□□ -0.64
LINC00458-203ENST00000451744 THOC2Q8NI27 1593 aaKnown RBP11.07□□□□□ -0.64
LINC00458-203ENST00000451744 HOXA2O43364 376 aa11.07□□□□□ -0.64
LINC00458-203ENST00000451744 GUCA2AQ02747 115 aa11.07□□□□□ -0.64
LINC00458-203ENST00000451744 CTC1Q2NKJ3 1217 aa11.06□□□□□ -0.64
LINC00458-203ENST00000451744 CCDC24Q8N4L8 307 aa11.06□□□□□ -0.64
LINC00458-203ENST00000451744 GMPR2Q9P2T1 348 aaKnown RBP11.06□□□□□ -0.64
LINC00458-203ENST00000451744 SNIP1Q8TAD8 396 aaKnown RBP11.05□□□□□ -0.64
LINC00458-203ENST00000451744 MRGPRX2Q96LB1 330 aa11.05□□□□□ -0.64
LINC00458-203ENST00000451744 SMPD1P17405 629 aa11.04□□□□□ -0.64
LINC00458-203ENST00000451744 SMCPP49901 116 aaPredicted RBP11.04□□□□□ -0.64
LINC00458-203ENST00000451744 GPCPD1Q9NPB8 672 aa11.04□□□□□ -0.64
LINC00458-203ENST00000451744 CLCN1P35523 988 aa11.03□□□□□ -0.64
LINC00458-203ENST00000451744 FAM217BQ9NTX9 383 aaPredicted RBP11.03□□□□□ -0.64
LINC00458-203ENST00000451744 CCDC88BA6NC98 1476 aa11.03□□□□□ -0.64
LINC00458-203ENST00000451744 PRDM2Q13029 1718 aa11.03□□□□□ -0.64
LINC00458-203ENST00000451744 J3QL48 77 aa11.02□□□□□ -0.65
LINC00458-203ENST00000451744 SYMPKQ92797 1274 aaKnown RBP11.02□□□□□ -0.65
LINC00458-203ENST00000451744 CADPSQ9ULU8 1353 aa11.02□□□□□ -0.65
LINC00458-203ENST00000451744 C11orf95C9JLR9 678 aaPredicted RBP11.01□□□□□ -0.65
LINC00458-203ENST00000451744 TREML4Q6UXN2 200 aa11.01□□□□□ -0.65
LINC00458-203ENST00000451744 KRI1Q8N9T8 703 aaKnown RBP11□□□□□ -0.65
LINC00458-203ENST00000451744 PRKCSHP14314 528 aaPredicted RBP10.99□□□□□ -0.65
LINC00458-203ENST00000451744 JUNDP17535 347 aa10.99□□□□□ -0.65
LINC00458-203ENST00000451744 SKOR1P84550 965 aa10.99□□□□□ -0.65
LINC00458-203ENST00000451744 NUTM1Q86Y26 1132 aa10.99□□□□□ -0.65
LINC00458-203ENST00000451744 LCE2AQ5TA79 106 aaPredicted RBP10.98□□□□□ -0.65
LINC00458-203ENST00000451744 RC3H1Q5TC82 1133 aaKnown RBP10.98□□□□□ -0.65
LINC00458-203ENST00000451744 REPIN1Q9BWE0 567 aaKnown RBP10.98□□□□□ -0.65
LINC00458-203ENST00000451744 CFTRP13569 1480 aa10.98□□□□□ -0.65
LINC00458-203ENST00000451744 WNT7BP56706 349 aa10.96□□□□□ -0.65
LINC00458-203ENST00000451744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC00458-203ENST00000451744 HPS1Q92902 700 aa10.96□□□□□ -0.65
LINC00458-203ENST00000451744 SUPT5HO00267 1087 aaKnown RBP10.95□□□□□ -0.66
LINC00458-203ENST00000451744 RETREG3Q86VR2 466 aa10.95□□□□□ -0.66
LINC00458-203ENST00000451744 ATP13A2Q9NQ11 1180 aa10.95□□□□□ -0.66
LINC00458-203ENST00000451744 CUX2O14529 1486 aa10.94□□□□□ -0.66
LINC00458-203ENST00000451744 FANCD2Q9BXW9 1451 aa10.94□□□□□ -0.66
LINC00458-203ENST00000451744 PDS5BQ9NTI5 1447 aa10.94□□□□□ -0.66
LINC00458-203ENST00000451744 PCDHGC3Q9UN70 934 aa10.94□□□□□ -0.66
LINC00458-203ENST00000451744 FDX1P10109 184 aa10.93□□□□□ -0.66
LINC00458-203ENST00000451744 PTCRAQ6ISU1 281 aaPredicted RBP10.93□□□□□ -0.66
LINC00458-203ENST00000451744 NUDT12Q9BQG2 462 aa10.93□□□□□ -0.66
LINC00458-203ENST00000451744 MRC2Q9UBG0 1479 aa10.93□□□□□ -0.66
LINC00458-203ENST00000451744 CEP164Q9UPV0 1460 aa10.93□□□□□ -0.66
LINC00458-203ENST00000451744 C6orf229H3BNL8 230 aa10.92□□□□□ -0.66
LINC00458-203ENST00000451744 WFS1O76024 890 aa10.92□□□□□ -0.66
LINC00458-203ENST00000451744 WDR62O43379 1518 aa10.92□□□□□ -0.66
LINC00458-203ENST00000451744 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
LINC00458-203ENST00000451744 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
LINC00458-203ENST00000451744 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms