RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 SULT6B1Q6IMI4 303 aa9.81□□□□□ -0.84
RIF1-205ENST00000444746 CCAR2Q8N163 923 aaKnown RBP9.81□□□□□ -0.84
RIF1-205ENST00000444746 ARHGAP5Q13017 1502 aa9.81□□□□□ -0.84
RIF1-205ENST00000444746 USHBP1Q8N6Y0 703 aa9.81□□□□□ -0.84
RIF1-205ENST00000444746 SCAPERQ9BY12 1400 aa9.81□□□□□ -0.84
RIF1-205ENST00000444746 DHX16O60231 1041 aaKnown RBP9.81□□□□□ -0.84
RIF1-205ENST00000444746 G3BP1Q13283 466 aaKnown RBP eCLIP9.81□□□□□ -0.848e-6■■■■□ 20.2
RIF1-205ENST00000444746 WAPLQ7Z5K2 1190 aa9.81□□□□□ -0.84
RIF1-205ENST00000444746 DDX54Q8TDD1 881 aaKnown RBP9.81□□□□□ -0.84
RIF1-205ENST00000444746 WASHC4Q2M389 1173 aa9.81□□□□□ -0.84
RIF1-205ENST00000444746 RNF214Q8ND24 703 aa9.81□□□□□ -0.84
RIF1-205ENST00000444746 NEXNQ0ZGT2 675 aa9.81□□□□□ -0.84
RIF1-205ENST00000444746 SYNJ1O43426 1573 aa9.81□□□□□ -0.84
RIF1-205ENST00000444746 C22orf23Q9BZE7 217 aa9.8□□□□□ -0.84
RIF1-205ENST00000444746 MYL6BP14649 208 aa9.8□□□□□ -0.84
RIF1-205ENST00000444746 RAPGEF4Q8WZA2 1011 aa9.8□□□□□ -0.84
RIF1-205ENST00000444746 SYAP1Q96A49 352 aaPredicted RBP9.8□□□□□ -0.84
RIF1-205ENST00000444746 ATF3P18847 181 aa9.79□□□□□ -0.84
RIF1-205ENST00000444746 C20orf194Q5TEA3 1177 aa9.79□□□□□ -0.84
RIF1-205ENST00000444746 STK3Q13188 491 aa9.79□□□□□ -0.84
RIF1-205ENST00000444746 NFXL1Q6ZNB6 911 aa9.79□□□□□ -0.84
RIF1-205ENST00000444746 API5Q9BZZ5 524 aaKnown RBP9.79□□□□□ -0.84
RIF1-205ENST00000444746 CEBPZQ03701 1054 aaKnown RBP9.79□□□□□ -0.84
RIF1-205ENST00000444746 SURF6O75683 361 aaKnown RBP9.79□□□□□ -0.84
RIF1-205ENST00000444746 ATP2B1P20020 1258 aa9.79□□□□□ -0.84
RIF1-205ENST00000444746 CFAP44Q96MT7 982 aa9.79□□□□□ -0.84
RIF1-205ENST00000444746 GNAI1P63096 354 aa9.78□□□□□ -0.84
RIF1-205ENST00000444746 NFKBIBQ15653 356 aa9.78□□□□□ -0.84
RIF1-205ENST00000444746 SLC4A2P04920 1241 aa9.78□□□□□ -0.84
RIF1-205ENST00000444746 TWISTNBQ3B726 338 aaPredicted RBP9.78□□□□□ -0.84
RIF1-205ENST00000444746 VPS37DQ86XT2 251 aa9.78□□□□□ -0.84
RIF1-205ENST00000444746 NOC3LQ8WTT2 800 aaKnown RBP9.78□□□□□ -0.84
RIF1-205ENST00000444746 UBTFL1P0CB47 393 aaPredicted RBP9.78□□□□□ -0.84
RIF1-205ENST00000444746 PROSER2Q86WR7 435 aaPredicted RBP9.78□□□□□ -0.84
RIF1-205ENST00000444746 BICD2Q8TD16 824 aa9.78□□□□□ -0.84
RIF1-205ENST00000444746 HTATSF1O43719 755 aaKnown RBP9.77□□□□□ -0.85
RIF1-205ENST00000444746 ZC3H6P61129 1189 aaKnown RBP9.77□□□□□ -0.85
RIF1-205ENST00000444746 TPD52L1Q16890 204 aaPredicted RBP9.77□□□□□ -0.85
RIF1-205ENST00000444746 FBXO3Q9UK99 471 aa9.77□□□□□ -0.85
RIF1-205ENST00000444746 SMARCA5O60264 1052 aaPredicted RBP9.77□□□□□ -0.85
RIF1-205ENST00000444746 CEBPAP49715 358 aaPredicted RBP9.77□□□□□ -0.85
RIF1-205ENST00000444746 BRPF3Q9ULD4 1205 aa9.77□□□□□ -0.85
RIF1-205ENST00000444746 PIP4K2BP78356 416 aa9.76□□□□□ -0.85
RIF1-205ENST00000444746 CDK13Q14004 1512 aaKnown RBP9.76□□□□□ -0.85
RIF1-205ENST00000444746 TPM4P67936 248 aa9.76□□□□□ -0.85
RIF1-205ENST00000444746 IL1RAPL2Q9NP60 686 aa9.76□□□□□ -0.85
RIF1-205ENST00000444746 CASKIN1Q8WXD9 1431 aa9.76□□□□□ -0.85
RIF1-205ENST00000444746 DDX11L8A8MPP1 907 aa9.75□□□□□ -0.85
RIF1-205ENST00000444746 FSD1Q9BTV5 496 aa9.75□□□□□ -0.85
RIF1-205ENST00000444746 AKAP17AQ02040 695 aaKnown RBP9.75□□□□□ -0.85
RIF1-205ENST00000444746 FBXO31Q5XUX0 539 aaPredicted RBP9.75□□□□□ -0.85
RIF1-205ENST00000444746 MCM10Q7L590 875 aa9.75□□□□□ -0.85
RIF1-205ENST00000444746 RRP12Q5JTH9 1297 aaKnown RBP9.75□□□□□ -0.85
RIF1-205ENST00000444746 SMC3Q9UQE7 1217 aa9.75□□□□□ -0.85
RIF1-205ENST00000444746 BECN2A8MW95 431 aa9.74□□□□□ -0.85
RIF1-205ENST00000444746 CPLX1O14810 134 aa9.74□□□□□ -0.85
RIF1-205ENST00000444746 BICDL1Q6ZP65 573 aa9.74□□□□□ -0.85
RIF1-205ENST00000444746 LARP6Q9BRS8 491 aaKnown RBP9.74□□□□□ -0.85
RIF1-205ENST00000444746 IL27Q8NEV9 243 aa9.74□□□□□ -0.85
RIF1-205ENST00000444746 PCMTD1Q96MG8 357 aaPredicted RBP9.74□□□□□ -0.85
RIF1-205ENST00000444746 PPP1R1BQ9UD71 204 aaPredicted RBP9.74□□□□□ -0.85
RIF1-205ENST00000444746 INTS3Q68E01 1043 aaKnown RBP9.74□□□□□ -0.85
RIF1-205ENST00000444746 PHF23Q9BUL5 403 aaPredicted RBP9.74□□□□□ -0.85
RIF1-205ENST00000444746 DDX58O95786 925 aaKnown RBP9.74□□□□□ -0.85
RIF1-205ENST00000444746 SYNE3Q6ZMZ3 975 aa9.73□□□□□ -0.85
RIF1-205ENST00000444746 NUTM1Q86Y26 1132 aa9.73□□□□□ -0.85
RIF1-205ENST00000444746 PNISRQ8TF01 805 aaKnown RBP9.73□□□□□ -0.85
RIF1-205ENST00000444746 ZKSCAN1P17029 563 aaPredicted RBP9.73□□□□□ -0.85
RIF1-205ENST00000444746 PRM3Q9NNZ6 103 aa9.73□□□□□ -0.85
RIF1-205ENST00000444746 CHMP5Q9NZZ3 219 aa9.73□□□□□ -0.85
RIF1-205ENST00000444746 PIBF1Q8WXW3 757 aa9.73□□□□□ -0.85
RIF1-205ENST00000444746 SNAPC4Q5SXM2 1469 aa9.73□□□□□ -0.85
RIF1-205ENST00000444746 PRPF40AO75400 957 aaKnown RBP9.72□□□□□ -0.85
RIF1-205ENST00000444746 JARID2Q92833 1246 aaPredicted RBP9.72□□□□□ -0.85
RIF1-205ENST00000444746 GOLGA6L19H0YKK7 550 aa9.72□□□□□ -0.85
RIF1-205ENST00000444746 NEK4P51957 841 aa9.72□□□□□ -0.85
RIF1-205ENST00000444746 WDR97A6NE52 1622 aa9.72□□□□□ -0.85
RIF1-205ENST00000444746 CDC45O75419 566 aa9.72□□□□□ -0.85
RIF1-205ENST00000444746 PTMSP20962 102 aa9.72□□□□□ -0.85
RIF1-205ENST00000444746 TTLL5Q6EMB2 1281 aa9.72□□□□□ -0.85
RIF1-205ENST00000444746 NME9Q86XW9 330 aa9.72□□□□□ -0.85
RIF1-205ENST00000444746 CUX1P39880 1505 aa9.72□□□□□ -0.85
RIF1-205ENST00000444746 CSPP1Q1MSJ5 1256 aa9.72□□□□□ -0.85
RIF1-205ENST00000444746 C9orf84Q5VXU9 1444 aa9.72□□□□□ -0.85
RIF1-205ENST00000444746 REC8O95072 547 aa9.71□□□□□ -0.85
RIF1-205ENST00000444746 HDAC5Q9UQL6 1122 aa9.71□□□□□ -0.85
RIF1-205ENST00000444746 FANCIQ9NVI1 1328 aa9.71□□□□□ -0.85
RIF1-205ENST00000444746 CAVIN1Q6NZI2 390 aaKnown RBP9.71□□□□□ -0.85
RIF1-205ENST00000444746 AEBP2Q6ZN18 517 aaPredicted RBP9.71□□□□□ -0.85
RIF1-205ENST00000444746 RUFY2Q8WXA3 655 aa9.71□□□□□ -0.85
RIF1-205ENST00000444746 FYCO1Q9BQS8 1478 aa9.71□□□□□ -0.86
RIF1-205ENST00000444746 PPFIA3O75145 1194 aa9.71□□□□□ -0.86
RIF1-205ENST00000444746 TRIM29Q14134 588 aa9.71□□□□□ -0.86
RIF1-205ENST00000444746 FAM13BQ9NYF5 915 aa9.71□□□□□ -0.86
RIF1-205ENST00000444746 EMILIN1Q9Y6C2 1016 aa9.71□□□□□ -0.86
RIF1-205ENST00000444746 ERBINQ96RT1 1412 aa9.71□□□□□ -0.86
RIF1-205ENST00000444746 TOM1L2Q6ZVM7 507 aa9.71□□□□□ -0.86
RIF1-205ENST00000444746 FMNL2Q96PY5 1086 aa9.71□□□□□ -0.86
RIF1-205ENST00000444746 HDGFL1Q5TGJ6 251 aa9.7□□□□□ -0.86
RIF1-205ENST00000444746 F6X3S4 739 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms