RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ARHGAP33O14559 1287 aa6.79□□□□□ -1.32
CDC42BPA-207ENST00000441725 DNAJB2P25686 324 aa6.79□□□□□ -1.32
CDC42BPA-207ENST00000441725 PRPF38BQ5VTL8 546 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-207ENST00000441725 TMEM134Q9H6X4 195 aa6.79□□□□□ -1.32
CDC42BPA-207ENST00000441725 USTQ9Y2C2 406 aa6.79□□□□□ -1.32
CDC42BPA-207ENST00000441725 LSM11P83369 360 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDC42BPA-207ENST00000441725 KCNA1Q09470 495 aa6.79□□□□□ -1.32
CDC42BPA-207ENST00000441725 TRIM34Q9BYJ4 488 aa6.79□□□□□ -1.32
CDC42BPA-207ENST00000441725 PPP1R12CQ9BZL4 782 aa6.79□□□□□ -1.32
CDC42BPA-207ENST00000441725 PATL2C9JE40 543 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-207ENST00000441725 CSB-PGBD3P0DP91 1061 aa6.78□□□□□ -1.32
CDC42BPA-207ENST00000441725 VAC14Q08AM6 782 aa6.78□□□□□ -1.32
CDC42BPA-207ENST00000441725 SPNS2Q8IVW8 549 aa6.78□□□□□ -1.32
CDC42BPA-207ENST00000441725 ZBTB3Q9H5J0 574 aa6.78□□□□□ -1.32
CDC42BPA-207ENST00000441725 BCL2L12Q9HB09 334 aa6.78□□□□□ -1.32
CDC42BPA-207ENST00000441725 TTBK1Q5TCY1 1321 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-207ENST00000441725 KDM4AO75164 1064 aa6.78□□□□□ -1.32
CDC42BPA-207ENST00000441725 CTDSPL2Q05D32 466 aa6.78□□□□□ -1.32
CDC42BPA-207ENST00000441725 WASHC4Q2M389 1173 aa6.78□□□□□ -1.32
CDC42BPA-207ENST00000441725 RDH13Q8NBN7 331 aa6.77□□□□□ -1.33
CDC42BPA-207ENST00000441725 KCNK17Q96T54 332 aa6.77□□□□□ -1.33
CDC42BPA-207ENST00000441725 HOXA2O43364 376 aa6.76□□□□□ -1.33
CDC42BPA-207ENST00000441725 PSEN2P49810 448 aa6.76□□□□□ -1.33
CDC42BPA-207ENST00000441725 PCDHGC3Q9UN70 934 aa6.76□□□□□ -1.33
CDC42BPA-207ENST00000441725 PALM3A6NDB9 673 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-207ENST00000441725 GUCA2AQ02747 115 aa6.76□□□□□ -1.33
CDC42BPA-207ENST00000441725 TATDN2Q93075 761 aa6.76□□□□□ -1.33
CDC42BPA-207ENST00000441725 HLA-CQ95604 372 aa6.76□□□□□ -1.33
CDC42BPA-207ENST00000441725 KCNH8Q96L42 1107 aa6.76□□□□□ -1.33
CDC42BPA-207ENST00000441725 PNMA3Q9UL41 463 aa6.76□□□□□ -1.33
CDC42BPA-207ENST00000441725 FDX1P10109 184 aa6.75□□□□□ -1.33
CDC42BPA-207ENST00000441725 ANKRD13DQ6ZTN6 518 aa6.75□□□□□ -1.33
CDC42BPA-207ENST00000441725 UCN2Q96RP3 112 aa6.75□□□□□ -1.33
CDC42BPA-207ENST00000441725 ALG2Q9H553 416 aa6.75□□□□□ -1.33
CDC42BPA-207ENST00000441725 NBPF26B4DH59 902 aa6.75□□□□□ -1.33
CDC42BPA-207ENST00000441725 SMAPO00193 183 aa6.75□□□□□ -1.33
CDC42BPA-207ENST00000441725 PTPREP23469 700 aa6.75□□□□□ -1.33
CDC42BPA-207ENST00000441725 LMOD1P29536 600 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-207ENST00000441725 DMRTA1Q5VZB9 504 aa6.75□□□□□ -1.33
CDC42BPA-207ENST00000441725 LRRN4Q8WUT4 740 aa6.75□□□□□ -1.33
CDC42BPA-207ENST00000441725 EPS8L1Q8TE68 723 aa6.74□□□□□ -1.33
CDC42BPA-207ENST00000441725 IVNS1ABPQ9Y6Y0 642 aa6.74□□□□□ -1.33
CDC42BPA-207ENST00000441725 PPP1R3GB7ZBB8 358 aa6.74□□□□□ -1.33
CDC42BPA-207ENST00000441725 GCGRP47871 477 aa6.73□□□□□ -1.33
CDC42BPA-207ENST00000441725 MYT1Q01538 1121 aa6.73□□□□□ -1.33
CDC42BPA-207ENST00000441725 MMRN1Q13201 1228 aa6.73□□□□□ -1.33
CDC42BPA-207ENST00000441725 PRR7Q8TB68 274 aa6.73□□□□□ -1.33
CDC42BPA-207ENST00000441725 TSC1Q92574 1164 aa6.73□□□□□ -1.33
CDC42BPA-207ENST00000441725 TFIP11Q9UBB9 837 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-207ENST00000441725 TRIM6-TRIM34B2RNG4 842 aa6.72□□□□□ -1.33
CDC42BPA-207ENST00000441725 TK2O00142 265 aa6.72□□□□□ -1.33
CDC42BPA-207ENST00000441725 USP46P62068 366 aa6.72□□□□□ -1.33
CDC42BPA-207ENST00000441725 CDCA8Q53HL2 280 aa6.72□□□□□ -1.33
CDC42BPA-207ENST00000441725 ADGRD1Q6QNK2 874 aa6.72□□□□□ -1.33
CDC42BPA-207ENST00000441725 TMEM88BA6NKF7 163 aa6.72□□□□□ -1.33
CDC42BPA-207ENST00000441725 MTMR2Q13614 643 aa6.72□□□□□ -1.33
CDC42BPA-207ENST00000441725 HELBQ8NG08 1087 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-207ENST00000441725 CFAP99D6REC4 459 aa6.71□□□□□ -1.33
CDC42BPA-207ENST00000441725 CCDC27Q2M243 656 aa6.71□□□□□ -1.33
CDC42BPA-207ENST00000441725 PACS2Q86VP3 889 aa6.71□□□□□ -1.33
CDC42BPA-207ENST00000441725 IGSF3O75054 1194 aa6.71□□□□□ -1.34
CDC42BPA-207ENST00000441725 VRTNQ9H8Y1 702 aa6.71□□□□□ -1.34
CDC42BPA-207ENST00000441725 LOC105371045A0A1W2PR82 267 aa6.7□□□□□ -1.34
CDC42BPA-207ENST00000441725 SLC10A3P09131 477 aa6.7□□□□□ -1.34
CDC42BPA-207ENST00000441725 PROX2Q3B8N5 592 aa6.7□□□□□ -1.34
CDC42BPA-207ENST00000441725 SND1Q7KZF4 910 aaKnown RBP eCLIP6.7□□□□□ -1.34
CDC42BPA-207ENST00000441725 ZBED2Q9BTP6 218 aa6.7□□□□□ -1.34
CDC42BPA-207ENST00000441725 SLC4A5Q9BY07 1137 aa6.7□□□□□ -1.34
CDC42BPA-207ENST00000441725 E9PSI1 815 aa6.69□□□□□ -1.34
CDC42BPA-207ENST00000441725 ATG7O95352 703 aa6.69□□□□□ -1.34
CDC42BPA-207ENST00000441725 MAFBQ9Y5Q3 323 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-207ENST00000441725 VPS9D1Q9Y2B5 631 aa6.69□□□□□ -1.34
CDC42BPA-207ENST00000441725 HRO43593 1189 aa6.68□□□□□ -1.34
CDC42BPA-207ENST00000441725 MYT1LQ9UL68 1186 aa6.68□□□□□ -1.34
CDC42BPA-207ENST00000441725 TBC1D9Q6ZT07 1266 aa6.68□□□□□ -1.34
CDC42BPA-207ENST00000441725 C6orf229H3BNL8 230 aa6.67□□□□□ -1.34
CDC42BPA-207ENST00000441725 NR6A1Q15406 480 aa6.67□□□□□ -1.34
CDC42BPA-207ENST00000441725 AMOTL2Q9Y2J4 779 aa6.67□□□□□ -1.34
CDC42BPA-207ENST00000441725 SOX11P35716 441 aa6.67□□□□□ -1.34
CDC42BPA-207ENST00000441725 SEMA3FQ13275 785 aa6.67□□□□□ -1.34
CDC42BPA-207ENST00000441725 RSPH4AQ5TD94 716 aa6.67□□□□□ -1.34
CDC42BPA-207ENST00000441725 SWT1Q5T5J6 900 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-207ENST00000441725 SYMPKQ92797 1274 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-207ENST00000441725 RNF166Q96A37 237 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-207ENST00000441725 PER1O15534 1290 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-207ENST00000441725 FUT2Q10981 343 aa6.65□□□□□ -1.35
CDC42BPA-207ENST00000441725 SLF2Q8IX21 1173 aa6.65□□□□□ -1.35
CDC42BPA-207ENST00000441725 BHMG1C9JSJ3 638 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-207ENST00000441725 ATP9BO43861 1147 aa6.64□□□□□ -1.35
CDC42BPA-207ENST00000441725 KIAA1468Q9P260 1216 aa6.64□□□□□ -1.35
CDC42BPA-207ENST00000441725 GNEQ9Y223 722 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-207ENST00000441725 KANK4Q5T7N3 995 aaPredicted RBP6.63□□□□□ -1.35
CDC42BPA-207ENST00000441725 ZMIZ1Q9ULJ6 1067 aa6.63□□□□□ -1.35
CDC42BPA-207ENST00000441725 RABGEF1Q9UJ41 708 aa6.62□□□□□ -1.35
CDC42BPA-207ENST00000441725 PIK3CDO00329 1044 aa6.62□□□□□ -1.35
CDC42BPA-207ENST00000441725 TMEM164Q5U3C3 297 aa6.62□□□□□ -1.35
CDC42BPA-207ENST00000441725 STK32AQ8WU08 396 aa6.62□□□□□ -1.35
CDC42BPA-207ENST00000441725 STAC3Q96MF2 364 aa6.62□□□□□ -1.35
CDC42BPA-207ENST00000441725 NBPF3Q9H094 633 aa6.62□□□□□ -1.35
CDC42BPA-207ENST00000441725 EIF4G2P78344 907 aaKnown RBP eCLIP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms