RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 CCDC184Q52MB2 194 aa23.18■■□□□ 1.3
TMEM39B-203ENST00000441402 DIP2AQ14689 1571 aa23.17■■□□□ 1.3
TMEM39B-203ENST00000441402 MRS2Q9HD23 443 aa23.17■■□□□ 1.3
TMEM39B-203ENST00000441402 CPS1P31327 1500 aa23.17■■□□□ 1.3
TMEM39B-203ENST00000441402 NINLQ9Y2I6 1382 aa23.16■■□□□ 1.3
TMEM39B-203ENST00000441402 AMER1Q5JTC6 1135 aaPredicted RBP23.16■■□□□ 1.3
TMEM39B-203ENST00000441402 SAFB2Q14151 953 aaKnown RBP eCLIP23.15■■□□□ 1.3
TMEM39B-203ENST00000441402 BRD4O60885 1362 aaPredicted RBP23.14■■□□□ 1.3
TMEM39B-203ENST00000441402 ATAD2Q6PL18 1390 aa23.13■■□□□ 1.29
TMEM39B-203ENST00000441402 MINK1Q8N4C8 1332 aaPredicted RBP23.13■■□□□ 1.29
TMEM39B-203ENST00000441402 WAPLQ7Z5K2 1190 aa23.13■■□□□ 1.29
TMEM39B-203ENST00000441402 SLC12A5Q9H2X9 1139 aa23.13■■□□□ 1.29
TMEM39B-203ENST00000441402 CARD14Q9BXL6 1004 aa23.12■■□□□ 1.29
TMEM39B-203ENST00000441402 PLEKHH1Q9ULM0 1364 aa23.11■■□□□ 1.29
TMEM39B-203ENST00000441402 ANKLE2Q86XL3 938 aa23.11■■□□□ 1.29
TMEM39B-203ENST00000441402 CABP2Q9NPB3 220 aa23.11■■□□□ 1.29
TMEM39B-203ENST00000441402 NLRP13Q86W25 1043 aa23.1■■□□□ 1.29
TMEM39B-203ENST00000441402 PIK3R4Q99570 1358 aa23.1■■□□□ 1.29
TMEM39B-203ENST00000441402 CC2D1BQ5T0F9 858 aaKnown RBP23.09■■□□□ 1.29
TMEM39B-203ENST00000441402 SLC26A8Q96RN1 970 aa23.09■■□□□ 1.29
TMEM39B-203ENST00000441402 CDK19Q9BWU1 502 aa23.09■■□□□ 1.29
TMEM39B-203ENST00000441402 SRPK2P78362 688 aaKnown RBP23.08■■□□□ 1.29
TMEM39B-203ENST00000441402 TMC1Q8TDI8 760 aa23.08■■□□□ 1.29
TMEM39B-203ENST00000441402 ANKRD36BQ8N2N9 1353 aa23.08■■□□□ 1.29
TMEM39B-203ENST00000441402 PTPRUQ92729 1446 aa23.08■■□□□ 1.28
TMEM39B-203ENST00000441402 CNGB1Q14028 1251 aaPredicted RBP23.08■■□□□ 1.28
TMEM39B-203ENST00000441402 ROBO2Q9HCK4 1378 aa23.06■■□□□ 1.28
TMEM39B-203ENST00000441402 USP32Q8NFA0 1604 aa23.05■■□□□ 1.28
TMEM39B-203ENST00000441402 WASLO00401 505 aaPredicted RBP23.05■■□□□ 1.28
TMEM39B-203ENST00000441402 PNISRQ8TF01 805 aaKnown RBP23.05■■□□□ 1.28
TMEM39B-203ENST00000441402 AMOTL2Q9Y2J4 779 aa23.03■■□□□ 1.28
TMEM39B-203ENST00000441402 PTCH1Q13635 1447 aa23.03■■□□□ 1.28
TMEM39B-203ENST00000441402 ADGRB2O60241 1585 aa23.01■■□□□ 1.27
TMEM39B-203ENST00000441402 NSD3Q9BZ95 1437 aa23.01■■□□□ 1.27
TMEM39B-203ENST00000441402 FAM9BQ8IZU0 186 aa23.01■■□□□ 1.27
TMEM39B-203ENST00000441402 TERF2IPQ9NYB0 399 aa23.01■■□□□ 1.27
TMEM39B-203ENST00000441402 XRN1Q8IZH2 1706 aaKnown RBP23■■□□□ 1.27
TMEM39B-203ENST00000441402 PPP2R1AP30153 589 aa22.98■■□□□ 1.27
TMEM39B-203ENST00000441402 NSD2O96028 1365 aa22.98■■□□□ 1.27
TMEM39B-203ENST00000441402 CGNL1Q0VF96 1302 aa22.98■■□□□ 1.27
TMEM39B-203ENST00000441402 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.98■■□□□ 1.27
TMEM39B-203ENST00000441402 CD163L1Q9NR16 1453 aa22.97■■□□□ 1.27
TMEM39B-203ENST00000441402 A0A1W2PP64 1363 aa22.97■■□□□ 1.27
TMEM39B-203ENST00000441402 ATP7BP35670 1465 aa22.96■■□□□ 1.27
TMEM39B-203ENST00000441402 CABP1Q9NZU7 370 aa22.95■■□□□ 1.26
TMEM39B-203ENST00000441402 INSRP06213 1382 aa22.95■■□□□ 1.26
TMEM39B-203ENST00000441402 CHD2O14647 1828 aaKnown RBP22.94■■□□□ 1.26
TMEM39B-203ENST00000441402 NPHP4O75161 1426 aaPredicted RBP22.94■■□□□ 1.26
TMEM39B-203ENST00000441402 HNRNPUQ00839 825 aaKnown RBP eCLIP22.94■■□□□ 1.26
TMEM39B-203ENST00000441402 HDGFL2Q7Z4V5 671 aaPredicted RBP22.94■■□□□ 1.26
TMEM39B-203ENST00000441402 NUDT16Q96DE0 195 aaKnown RBP22.93■■□□□ 1.26
TMEM39B-203ENST00000441402 CCDC61Q9Y6R9 512 aa22.93■■□□□ 1.26
TMEM39B-203ENST00000441402 CPSF1Q10570 1443 aaKnown RBP22.91■■□□□ 1.26
TMEM39B-203ENST00000441402 KCNA6P17658 529 aa22.9■■□□□ 1.26
TMEM39B-203ENST00000441402 MORC1Q86VD1 984 aa22.89■■□□□ 1.26
TMEM39B-203ENST00000441402 KDM4FA0A1W2PPD8 638 aa22.88■■□□□ 1.25
TMEM39B-203ENST00000441402 PPIP5K1Q6PFW1 1433 aa22.88■■□□□ 1.25
TMEM39B-203ENST00000441402 ZBED9Q6R2W3 1325 aa22.86■■□□□ 1.25
TMEM39B-203ENST00000441402 PRR36Q9H6K5 1346 aa22.86■■□□□ 1.25
TMEM39B-203ENST00000441402 ZNF692Q9BU19 519 aaPredicted RBP22.86■■□□□ 1.25
TMEM39B-203ENST00000441402 NCKAP5LQ9HCH0 1330 aa22.86■■□□□ 1.25
TMEM39B-203ENST00000441402 PLEKHG3A1L390 1219 aa22.85■■□□□ 1.25
TMEM39B-203ENST00000441402 CDC42BPGQ6DT37 1551 aa22.85■■□□□ 1.25
TMEM39B-203ENST00000441402 FYB1O15117 783 aa22.84■■□□□ 1.25
TMEM39B-203ENST00000441402 TOPAZ1Q8N9V7 1692 aa22.83■■□□□ 1.25
TMEM39B-203ENST00000441402 POLR3AO14802 1390 aaPredicted RBP22.83■■□□□ 1.25
TMEM39B-203ENST00000441402 EDC4Q6P2E9 1401 aaKnown RBP22.83■■□□□ 1.25
TMEM39B-203ENST00000441402 ANKRD26Q9UPS8 1709 aa22.83■■□□□ 1.24
TMEM39B-203ENST00000441402 AKAP12Q02952 1782 aa22.81■■□□□ 1.24
TMEM39B-203ENST00000441402 NWD1Q149M9 1564 aa22.8■■□□□ 1.24
TMEM39B-203ENST00000441402 MON2Q7Z3U7 1717 aa22.8■■□□□ 1.24
TMEM39B-203ENST00000441402 ANKARQ7Z5J8 1434 aa22.79■■□□□ 1.24
TMEM39B-203ENST00000441402 KIF20BQ96Q89 1820 aa22.78■■□□□ 1.24
TMEM39B-203ENST00000441402 BLMP54132 1417 aaPredicted RBP22.77■■□□□ 1.24
TMEM39B-203ENST00000441402 GGNBP2Q9H3C7 697 aa22.77■■□□□ 1.24
TMEM39B-203ENST00000441402 ITSN1Q15811 1721 aa22.77■■□□□ 1.23
TMEM39B-203ENST00000441402 WDR43Q15061 677 aaKnown RBP eCLIP22.75■■□□□ 1.23
TMEM39B-203ENST00000441402 ADAMTS8Q9UP79 889 aa22.75■■□□□ 1.23
TMEM39B-203ENST00000441402 FMN2Q9NZ56 1722 aa22.75■■□□□ 1.23
TMEM39B-203ENST00000441402 SCAF1Q9H7N4 1312 aaKnown RBP22.74■■□□□ 1.23
TMEM39B-203ENST00000441402 ACEP12821 1306 aa22.74■■□□□ 1.23
TMEM39B-203ENST00000441402 MTHFSP49914 203 aa22.73■■□□□ 1.23
TMEM39B-203ENST00000441402 ADGRL3Q9HAR2 1447 aa22.73■■□□□ 1.23
TMEM39B-203ENST00000441402 NALCNQ8IZF0 1738 aa22.72■■□□□ 1.23
TMEM39B-203ENST00000441402 GTF3C3Q9Y5Q9 886 aa22.72■■□□□ 1.23
TMEM39B-203ENST00000441402 LMTK3Q96Q04 1460 aa22.71■■□□□ 1.23
TMEM39B-203ENST00000441402 TNNT2P45379 298 aaPredicted RBP22.71■■□□□ 1.23
TMEM39B-203ENST00000441402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.71■■□□□ 1.23
TMEM39B-203ENST00000441402 CFAP53Q96M91 514 aa22.71■■□□□ 1.23
TMEM39B-203ENST00000441402 NKTRP30414 1462 aaKnown RBP22.71■■□□□ 1.23
TMEM39B-203ENST00000441402 USP6P35125 1406 aa22.7■■□□□ 1.22
TMEM39B-203ENST00000441402 SSH2Q76I76 1423 aa22.7■■□□□ 1.22
TMEM39B-203ENST00000441402 NUTM2FA1L443 756 aa22.69■■□□□ 1.22
TMEM39B-203ENST00000441402 RGPD8O14715 1765 aaPredicted RBP22.69■■□□□ 1.22
TMEM39B-203ENST00000441402 NRKQ7Z2Y5 1582 aa22.69■■□□□ 1.22
TMEM39B-203ENST00000441402 TTC21BQ7Z4L5 1316 aa22.68■■□□□ 1.22
TMEM39B-203ENST00000441402 HSPA2P54652 639 aa22.67■■□□□ 1.22
TMEM39B-203ENST00000441402 AATKQ6ZMQ8 1374 aa22.66■■□□□ 1.22
TMEM39B-203ENST00000441402 NCOA3Q9Y6Q9 1424 aa22.66■■□□□ 1.22
TMEM39B-203ENST00000441402 SHPRHQ149N8 1683 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms