RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 MYO3AQ8NEV4 1616 aa19.74■□□□□ 0.75
CDC42EP4-202ENST00000439510 IFT172Q9UG01 1749 aa19.74■□□□□ 0.75
CDC42EP4-202ENST00000439510 PDE3AQ14432 1141 aa19.73■□□□□ 0.75
CDC42EP4-202ENST00000439510 CGNL1Q0VF96 1302 aa19.73■□□□□ 0.75
CDC42EP4-202ENST00000439510 FRAT1Q92837 279 aaPredicted RBP19.72■□□□□ 0.75
CDC42EP4-202ENST00000439510 KANK1Q14678 1352 aa19.71■□□□□ 0.75
CDC42EP4-202ENST00000439510 POLR3AO14802 1390 aaPredicted RBP19.71■□□□□ 0.75
CDC42EP4-202ENST00000439510 SHPRHQ149N8 1683 aa19.7■□□□□ 0.74
CDC42EP4-202ENST00000439510 IGHDP01880 384 aa19.7■□□□□ 0.74
CDC42EP4-202ENST00000439510 MLECQ14165 292 aa19.7■□□□□ 0.74
CDC42EP4-202ENST00000439510 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
CDC42EP4-202ENST00000439510 RTN4Q9NQC3 1192 aaKnown RBP19.7■□□□□ 0.74
CDC42EP4-202ENST00000439510 KIF1BO60333 1816 aa19.7■□□□□ 0.74
CDC42EP4-202ENST00000439510 USP19O94966 1318 aa19.69■□□□□ 0.74
CDC42EP4-202ENST00000439510 SIGLEC1Q9BZZ2 1709 aa19.69■□□□□ 0.74
CDC42EP4-202ENST00000439510 CARD14Q9BXL6 1004 aa19.69■□□□□ 0.74
CDC42EP4-202ENST00000439510 SBNO2Q9Y2G9 1366 aa19.69■□□□□ 0.74
CDC42EP4-202ENST00000439510 BRPF3Q9ULD4 1205 aa19.68■□□□□ 0.74
CDC42EP4-202ENST00000439510 MAPK8IP3Q9UPT6 1336 aa19.68■□□□□ 0.74
CDC42EP4-202ENST00000439510 CENPJQ9HC77 1338 aaPredicted RBP19.67■□□□□ 0.74
CDC42EP4-202ENST00000439510 CLUAP1Q96AJ1 413 aa19.67■□□□□ 0.74
CDC42EP4-202ENST00000439510 FRAT2O75474 233 aaPredicted RBP19.66■□□□□ 0.74
CDC42EP4-202ENST00000439510 NRXN1Q9ULB1 1477 aa19.66■□□□□ 0.74
CDC42EP4-202ENST00000439510 WWC1Q8IX03 1113 aa19.66■□□□□ 0.74
CDC42EP4-202ENST00000439510 NLRP1Q9C000 1473 aa19.65■□□□□ 0.74
CDC42EP4-202ENST00000439510 CFAP70Q5T0N1 1121 aa19.65■□□□□ 0.74
CDC42EP4-202ENST00000439510 UGGT1Q9NYU2 1555 aa19.64■□□□□ 0.73
CDC42EP4-202ENST00000439510 MROH2AA6NES4 1674 aa19.64■□□□□ 0.73
CDC42EP4-202ENST00000439510 IQSEC2Q5JU85 1478 aa19.64■□□□□ 0.73
CDC42EP4-202ENST00000439510 ZC3H13Q5T200 1668 aaKnown RBP19.63■□□□□ 0.73
CDC42EP4-202ENST00000439510 ZMYM3Q14202 1370 aa19.63■□□□□ 0.73
CDC42EP4-202ENST00000439510 SETBP1Q9Y6X0 1596 aa19.63■□□□□ 0.73
CDC42EP4-202ENST00000439510 AAMPQ13685 434 aa19.63■□□□□ 0.73
CDC42EP4-202ENST00000439510 EFCAB6Q5THR3 1501 aa19.62■□□□□ 0.73
CDC42EP4-202ENST00000439510 ADGRF5Q8IZF2 1346 aa19.62■□□□□ 0.73
CDC42EP4-202ENST00000439510 ARHGEF40Q8TER5 1519 aa19.61■□□□□ 0.73
CDC42EP4-202ENST00000439510 USP32Q8NFA0 1604 aa19.61■□□□□ 0.73
CDC42EP4-202ENST00000439510 PANK1Q8TE04 598 aa19.61■□□□□ 0.73
CDC42EP4-202ENST00000439510 COG6Q9Y2V7 657 aa19.61■□□□□ 0.73
CDC42EP4-202ENST00000439510 PHF23Q9BUL5 403 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP4-202ENST00000439510 CANXP27824 592 aaKnown RBP19.59■□□□□ 0.73
CDC42EP4-202ENST00000439510 ABCC3O15438 1527 aa19.59■□□□□ 0.73
CDC42EP4-202ENST00000439510 SEC24BO95487 1268 aa19.58■□□□□ 0.73
CDC42EP4-202ENST00000439510 RARSP54136 660 aaKnown RBP19.57■□□□□ 0.72
CDC42EP4-202ENST00000439510 BECN1Q14457 450 aa19.57■□□□□ 0.72
CDC42EP4-202ENST00000439510 PMFBP1Q8TBY8 1022 aa19.57■□□□□ 0.72
CDC42EP4-202ENST00000439510 RUNDC1Q96C34 613 aa19.57■□□□□ 0.72
CDC42EP4-202ENST00000439510 NPATQ14207 1427 aa19.57■□□□□ 0.72
CDC42EP4-202ENST00000439510 NSD3Q9BZ95 1437 aa19.57■□□□□ 0.72
CDC42EP4-202ENST00000439510 QRICH2Q9H0J4 1663 aa19.57■□□□□ 0.72
CDC42EP4-202ENST00000439510 ADGRB3O60242 1522 aa19.56■□□□□ 0.72
CDC42EP4-202ENST00000439510 CAMSAP1Q5T5Y3 1602 aa19.56■□□□□ 0.72
CDC42EP4-202ENST00000439510 WDR63Q8IWG1 891 aa19.55■□□□□ 0.72
CDC42EP4-202ENST00000439510 LMTK2Q8IWU2 1503 aa19.55■□□□□ 0.72
CDC42EP4-202ENST00000439510 PPLO60437 1756 aa19.53■□□□□ 0.72
CDC42EP4-202ENST00000439510 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
CDC42EP4-202ENST00000439510 MORC1Q86VD1 984 aa19.53■□□□□ 0.72
CDC42EP4-202ENST00000439510 NCBP3Q53F19 620 aaKnown RBP19.52■□□□□ 0.72
CDC42EP4-202ENST00000439510 TCP11L2Q8N4U5 519 aa19.52■□□□□ 0.72
CDC42EP4-202ENST00000439510 UBE2Q2Q8WVN8 375 aa19.52■□□□□ 0.72
CDC42EP4-202ENST00000439510 CHGAP10645 457 aaKnown RBP19.52■□□□□ 0.71
CDC42EP4-202ENST00000439510 PCDHB15Q9Y5E8 787 aa19.52■□□□□ 0.71
CDC42EP4-202ENST00000439510 RLBP1P12271 317 aa19.51■□□□□ 0.71
CDC42EP4-202ENST00000439510 ADGRB1O14514 1584 aa19.51■□□□□ 0.71
CDC42EP4-202ENST00000439510 REREQ9P2R6 1566 aa19.51■□□□□ 0.71
CDC42EP4-202ENST00000439510 CLTCQ00610 1675 aaKnown RBP19.51■□□□□ 0.71
CDC42EP4-202ENST00000439510 ANTXR1Q9H6X2 564 aa19.5■□□□□ 0.71
CDC42EP4-202ENST00000439510 NOS1P29475 1434 aa19.5■□□□□ 0.71
CDC42EP4-202ENST00000439510 FBXO31Q5XUX0 539 aaPredicted RBP19.5■□□□□ 0.71
CDC42EP4-202ENST00000439510 TBC1D32Q96NH3 1257 aa19.5■□□□□ 0.71
CDC42EP4-202ENST00000439510 PLPPR3Q6T4P5 718 aa19.49■□□□□ 0.71
CDC42EP4-202ENST00000439510 ADGRB2O60241 1585 aa19.49■□□□□ 0.71
CDC42EP4-202ENST00000439510 RRP7AQ9Y3A4 280 aaKnown RBP19.49■□□□□ 0.71
CDC42EP4-202ENST00000439510 AGLP35573 1532 aa19.48■□□□□ 0.71
CDC42EP4-202ENST00000439510 NEUROD2Q15784 382 aa19.47■□□□□ 0.71
CDC42EP4-202ENST00000439510 UPF2Q9HAU5 1272 aaKnown RBP19.47■□□□□ 0.71
CDC42EP4-202ENST00000439510 PDZRN3Q9UPQ7 1066 aa19.47■□□□□ 0.71
CDC42EP4-202ENST00000439510 FAM43AQ8N2R8 423 aa19.46■□□□□ 0.71
CDC42EP4-202ENST00000439510 SLC12A5Q9H2X9 1139 aa19.46■□□□□ 0.71
CDC42EP4-202ENST00000439510 RWDD1Q9H446 243 aaPredicted RBP19.46■□□□□ 0.71
CDC42EP4-202ENST00000439510 POGKQ9P215 609 aa19.46■□□□□ 0.71
CDC42EP4-202ENST00000439510 TNNQ9UQP3 1299 aa19.46■□□□□ 0.71
CDC42EP4-202ENST00000439510 ESF1Q9H501 851 aaKnown RBP19.46■□□□□ 0.71
CDC42EP4-202ENST00000439510 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
CDC42EP4-202ENST00000439510 C14orf93Q9H972 538 aaKnown RBP19.45■□□□□ 0.7
CDC42EP4-202ENST00000439510 SLKQ9H2G2 1235 aaPredicted RBP19.44■□□□□ 0.7
CDC42EP4-202ENST00000439510 TNNT2P45379 298 aaPredicted RBP19.44■□□□□ 0.7
CDC42EP4-202ENST00000439510 MTHFSP49914 203 aa19.44■□□□□ 0.7
CDC42EP4-202ENST00000439510 MYH16Q9H6N6 1097 aa19.44■□□□□ 0.7
CDC42EP4-202ENST00000439510 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
CDC42EP4-202ENST00000439510 NSD2O96028 1365 aa19.43■□□□□ 0.7
CDC42EP4-202ENST00000439510 TBC1D2Q9BYX2 928 aa19.43■□□□□ 0.7
CDC42EP4-202ENST00000439510 MVPQ14764 893 aaKnown RBP19.42■□□□□ 0.7
CDC42EP4-202ENST00000439510 TRAK1Q9UPV9 953 aa19.42■□□□□ 0.7
CDC42EP4-202ENST00000439510 PUS7Q96PZ0 661 aaKnown RBP19.42■□□□□ 0.7
CDC42EP4-202ENST00000439510 BCL2L13Q9BXK5 485 aa19.42■□□□□ 0.7
CDC42EP4-202ENST00000439510 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.42■□□□□ 0.7
CDC42EP4-202ENST00000439510 PREX1Q8TCU6 1659 aa19.41■□□□□ 0.7
CDC42EP4-202ENST00000439510 NUTM2DQ5VT03 806 aaPredicted RBP19.41■□□□□ 0.7
CDC42EP4-202ENST00000439510 CT47B1P0C2W7 299 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms