RNA–Protein interactions for RNA: ENST00000438819.1

CLIP4-206, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 4

Gene CLIP4, Length 562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-206ENST00000438819 WWC1Q8IX03 1113 aa9.47□□□□□ -0.89
CLIP4-206ENST00000438819 ZBTB3Q9H5J0 574 aa9.47□□□□□ -0.89
CLIP4-206ENST00000438819 ABL2P42684 1182 aa9.46□□□□□ -0.9
CLIP4-206ENST00000438819 TBC1D2BQ9UPU7 963 aa9.46□□□□□ -0.9
CLIP4-206ENST00000438819 RABGEF1Q9UJ41 708 aa9.45□□□□□ -0.9
CLIP4-206ENST00000438819 PCDHGC3Q9UN70 934 aa9.45□□□□□ -0.9
CLIP4-206ENST00000438819 HDGFP51858 240 aaKnown RBP9.43□□□□□ -0.9
CLIP4-206ENST00000438819 GUCA2AQ02747 115 aa9.43□□□□□ -0.9
CLIP4-206ENST00000438819 HLA-CQ95604 372 aa9.43□□□□□ -0.9
CLIP4-206ENST00000438819 SEPT9Q9UHD8 586 aaPredicted RBP9.43□□□□□ -0.9
CLIP4-206ENST00000438819 GJD4Q96KN9 370 aaPredicted RBP9.42□□□□□ -0.9
CLIP4-206ENST00000438819 POM121CA8CG34 1229 aa9.41□□□□□ -0.9
CLIP4-206ENST00000438819 CTDSPL2Q05D32 466 aa9.41□□□□□ -0.9
CLIP4-206ENST00000438819 CALR3Q96L12 384 aaKnown RBP9.41□□□□□ -0.9
CLIP4-206ENST00000438819 MTMR2Q13614 643 aa9.4□□□□□ -0.9
CLIP4-206ENST00000438819 FAM98CQ17RN3 349 aaKnown RBP9.4□□□□□ -0.9
CLIP4-206ENST00000438819 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
CLIP4-206ENST00000438819 BHMG1C9JSJ3 638 aaPredicted RBP9.39□□□□□ -0.91
CLIP4-206ENST00000438819 SLC4A3P48751 1232 aa9.39□□□□□ -0.91
CLIP4-206ENST00000438819 GRIPAP1Q4V328 841 aa9.39□□□□□ -0.91
CLIP4-206ENST00000438819 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
CLIP4-206ENST00000438819 GOLGA8CPA6NN73 597 aa9.38□□□□□ -0.91
CLIP4-206ENST00000438819 IRF5Q13568 498 aa9.38□□□□□ -0.91
CLIP4-206ENST00000438819 SLF2Q8IX21 1173 aa9.38□□□□□ -0.91
CLIP4-206ENST00000438819 MRPL50Q8N5N7 158 aaKnown RBP9.38□□□□□ -0.91
CLIP4-206ENST00000438819 GLMNQ92990 594 aa9.38□□□□□ -0.91
CLIP4-206ENST00000438819 KCTD12Q96CX2 325 aaKnown RBP9.38□□□□□ -0.91
CLIP4-206ENST00000438819 HMX1Q9NP08 348 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-206ENST00000438819 HCSTQ9UBK5 93 aa9.38□□□□□ -0.91
CLIP4-206ENST00000438819 FUT2Q10981 343 aa9.37□□□□□ -0.91
CLIP4-206ENST00000438819 SAMD7Q7Z3H4 446 aa9.37□□□□□ -0.91
CLIP4-206ENST00000438819 HELBQ8NG08 1087 aaPredicted RBP9.37□□□□□ -0.91
CLIP4-206ENST00000438819 TRAIPQ9BWF2 469 aa9.37□□□□□ -0.91
CLIP4-206ENST00000438819 ZBTB7CA1YPR0 619 aa9.36□□□□□ -0.91
CLIP4-206ENST00000438819 CFAP99D6REC4 459 aa9.36□□□□□ -0.91
CLIP4-206ENST00000438819 NECTIN2Q92692 538 aa9.36□□□□□ -0.91
CLIP4-206ENST00000438819 TRIM34Q9BYJ4 488 aa9.36□□□□□ -0.91
CLIP4-206ENST00000438819 C6orf229H3BNL8 230 aa9.35□□□□□ -0.91
CLIP4-206ENST00000438819 CFHP08603 1231 aa9.35□□□□□ -0.91
CLIP4-206ENST00000438819 WASHC4Q2M389 1173 aa9.35□□□□□ -0.91
CLIP4-206ENST00000438819 LAPTM4BQ86VI4 370 aa9.35□□□□□ -0.91
CLIP4-206ENST00000438819 LRRN4Q8WUT4 740 aa9.35□□□□□ -0.91
CLIP4-206ENST00000438819 TSC1Q92574 1164 aa9.35□□□□□ -0.91
CLIP4-206ENST00000438819 GPR37L1O60883 481 aa9.34□□□□□ -0.91
CLIP4-206ENST00000438819 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
CLIP4-206ENST00000438819 HDGFL1Q5TGJ6 251 aa9.34□□□□□ -0.91
CLIP4-206ENST00000438819 PPP1R15AO75807 674 aaPredicted RBP9.33□□□□□ -0.92
CLIP4-206ENST00000438819 SYMPKQ92797 1274 aaKnown RBP9.32□□□□□ -0.92
CLIP4-206ENST00000438819 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
CLIP4-206ENST00000438819 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
CLIP4-206ENST00000438819 EPS8L1Q8TE68 723 aa9.31□□□□□ -0.92
CLIP4-206ENST00000438819 WNT2BQ93097 391 aa9.31□□□□□ -0.92
CLIP4-206ENST00000438819 ACIN1Q9UKV3 1341 aaKnown RBP9.31□□□□□ -0.92
CLIP4-206ENST00000438819 RNF40O75150 1001 aa9.3□□□□□ -0.92
CLIP4-206ENST00000438819 PRR7Q8TB68 274 aa9.3□□□□□ -0.92
CLIP4-206ENST00000438819 ZFRQ96KR1 1074 aaKnown RBP9.3□□□□□ -0.92
CLIP4-206ENST00000438819 PTPN5P54829 565 aa9.29□□□□□ -0.92
CLIP4-206ENST00000438819 VAC14Q08AM6 782 aa9.29□□□□□ -0.92
CLIP4-206ENST00000438819 KMT5BQ4FZB7 885 aa9.29□□□□□ -0.92
CLIP4-206ENST00000438819 THSD4Q6ZMP0 1018 aa9.28□□□□□ -0.92
CLIP4-206ENST00000438819 KCTD17Q8N5Z5 321 aa9.28□□□□□ -0.92
CLIP4-206ENST00000438819 ANKK1Q8NFD2 765 aa9.28□□□□□ -0.92
CLIP4-206ENST00000438819 MORN1Q5T089 497 aa9.27□□□□□ -0.93
CLIP4-206ENST00000438819 RETREG3Q86VR2 466 aa9.27□□□□□ -0.93
CLIP4-206ENST00000438819 ALG2Q9H553 416 aa9.27□□□□□ -0.93
CLIP4-206ENST00000438819 PER1O15534 1290 aaPredicted RBP9.26□□□□□ -0.93
CLIP4-206ENST00000438819 ACTN4O43707 911 aaKnown RBP9.26□□□□□ -0.93
CLIP4-206ENST00000438819 NR6A1Q15406 480 aa9.26□□□□□ -0.93
CLIP4-206ENST00000438819 Q3C1V9 767 aa9.25□□□□□ -0.93
CLIP4-206ENST00000438819 PUS10Q3MIT2 529 aaKnown RBP9.25□□□□□ -0.93
CLIP4-206ENST00000438819 PBXIP1Q96AQ6 731 aa9.25□□□□□ -0.93
CLIP4-206ENST00000438819 SLC27A5Q9Y2P5 690 aa9.25□□□□□ -0.93
CLIP4-206ENST00000438819 RFX1P22670 979 aa9.24□□□□□ -0.93
CLIP4-206ENST00000438819 CFAP70Q5T0N1 1121 aa9.24□□□□□ -0.93
CLIP4-206ENST00000438819 DESI1Q6ICB0 168 aa9.24□□□□□ -0.93
CLIP4-206ENST00000438819 AEBP1Q8IUX7 1158 aa9.24□□□□□ -0.93
CLIP4-206ENST00000438819 LRCH3Q96II8 777 aa9.24□□□□□ -0.93
CLIP4-206ENST00000438819 PPP1R12CQ9BZL4 782 aa9.24□□□□□ -0.93
CLIP4-206ENST00000438819 SRPK2P78362 688 aaKnown RBP9.23□□□□□ -0.93
CLIP4-206ENST00000438819 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-206ENST00000438819 SOX11P35716 441 aa9.22□□□□□ -0.93
CLIP4-206ENST00000438819 PDE4CQ08493 712 aa9.22□□□□□ -0.93
CLIP4-206ENST00000438819 PLA2G2EQ9NZK7 142 aa9.22□□□□□ -0.93
CLIP4-206ENST00000438819 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.21□□□□□ -0.94
CLIP4-206ENST00000438819 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
CLIP4-206ENST00000438819 LYPD8Q6UX82 237 aa9.21□□□□□ -0.94
CLIP4-206ENST00000438819 PRR14Q9BWN1 585 aa9.21□□□□□ -0.94
CLIP4-206ENST00000438819 CCDC9Q9Y3X0 531 aaKnown RBP9.21□□□□□ -0.94
CLIP4-206ENST00000438819 PALM3A6NDB9 673 aaPredicted RBP9.2□□□□□ -0.94
CLIP4-206ENST00000438819 PNMA1Q8ND90 353 aa9.2□□□□□ -0.94
CLIP4-206ENST00000438819 BCAMP50895 628 aa9.19□□□□□ -0.94
CLIP4-206ENST00000438819 SEMA3FQ13275 785 aa9.19□□□□□ -0.94
CLIP4-206ENST00000438819 BLOC1S3Q6QNY0 202 aa9.19□□□□□ -0.94
CLIP4-206ENST00000438819 RNF19BQ6ZMZ0 732 aa9.19□□□□□ -0.94
CLIP4-206ENST00000438819 UCN2Q96RP3 112 aa9.19□□□□□ -0.94
CLIP4-206ENST00000438819 TFIP11Q9UBB9 837 aaKnown RBP9.19□□□□□ -0.94
CLIP4-206ENST00000438819 SALL2Q9Y467 1007 aaPredicted RBP9.19□□□□□ -0.94
CLIP4-206ENST00000438819 LMOD1P29536 600 aaPredicted RBP9.18□□□□□ -0.94
CLIP4-206ENST00000438819 BRICD5Q6PL45 260 aa9.18□□□□□ -0.94
CLIP4-206ENST00000438819 USB1Q9BQ65 265 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms