RNA–Protein interactions for RNA: ENST00000438819.1

CLIP4-206, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 4

Gene CLIP4, Length 562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-206ENST00000438819 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
CLIP4-206ENST00000438819 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
CLIP4-206ENST00000438819 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
CLIP4-206ENST00000438819 PHF23Q9BUL5 403 aaPredicted RBP18.87■□□□□ 0.61
CLIP4-206ENST00000438819 FOXD1Q16676 465 aa17.69■□□□□ 0.42
CLIP4-206ENST00000438819 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
CLIP4-206ENST00000438819 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
CLIP4-206ENST00000438819 ADRA2BP18089 450 aa16.74■□□□□ 0.27
CLIP4-206ENST00000438819 PIAS4Q8N2W9 510 aaPredicted RBP16.64■□□□□ 0.25
CLIP4-206ENST00000438819 MSH5O43196 834 aa16.49■□□□□ 0.23
CLIP4-206ENST00000438819 KCNA4P22459 653 aa15.59■□□□□ 0.09
CLIP4-206ENST00000438819 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
CLIP4-206ENST00000438819 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
CLIP4-206ENST00000438819 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
CLIP4-206ENST00000438819 PPP4R3CPQ6ZMV5 832 aa15.25■□□□□ 0.03
CLIP4-206ENST00000438819 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
CLIP4-206ENST00000438819 DMRT2Q9Y5R5 561 aa15.14■□□□□ 0.01
CLIP4-206ENST00000438819 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
CLIP4-206ENST00000438819 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
CLIP4-206ENST00000438819 CNKSR2Q8WXI2 1034 aa14.91□□□□□ -0.02
CLIP4-206ENST00000438819 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
CLIP4-206ENST00000438819 NPM3O75607 178 aaKnown RBP14.8□□□□□ -0.04
CLIP4-206ENST00000438819 HOXD11P31277 338 aaPredicted RBP14.7□□□□□ -0.06
CLIP4-206ENST00000438819 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
CLIP4-206ENST00000438819 DCAF8L1A6NGE4 600 aa14.55□□□□□ -0.08
CLIP4-206ENST00000438819 ZBTB22O15209 634 aa14.37□□□□□ -0.11
CLIP4-206ENST00000438819 DNAJC5BQ9UF47 199 aa14.28□□□□□ -0.12
CLIP4-206ENST00000438819 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
CLIP4-206ENST00000438819 RNF39Q9H2S5 420 aa14.07□□□□□ -0.16
CLIP4-206ENST00000438819 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.16
CLIP4-206ENST00000438819 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
CLIP4-206ENST00000438819 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
CLIP4-206ENST00000438819 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
CLIP4-206ENST00000438819 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
CLIP4-206ENST00000438819 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
CLIP4-206ENST00000438819 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
CLIP4-206ENST00000438819 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.53□□□□□ -0.24
CLIP4-206ENST00000438819 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
CLIP4-206ENST00000438819 APLP2Q06481 763 aa13.48□□□□□ -0.25
CLIP4-206ENST00000438819 CAPN15O75808 1086 aa13.46□□□□□ -0.25
CLIP4-206ENST00000438819 SAMD1Q6SPF0 538 aaPredicted RBP13.46□□□□□ -0.25
CLIP4-206ENST00000438819 SPINK5Q9NQ38 1064 aaPredicted RBP13.45□□□□□ -0.26
CLIP4-206ENST00000438819 FKBP8Q14318 412 aa13.32□□□□□ -0.28
CLIP4-206ENST00000438819 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
CLIP4-206ENST00000438819 ZNF219Q9P2Y4 722 aaPredicted RBP13.3□□□□□ -0.28
CLIP4-206ENST00000438819 DSG3P32926 999 aa13.27□□□□□ -0.29
CLIP4-206ENST00000438819 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
CLIP4-206ENST00000438819 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
CLIP4-206ENST00000438819 AMER1Q5JTC6 1135 aaPredicted RBP13.23□□□□□ -0.29
CLIP4-206ENST00000438819 ABCB7O75027 752 aa13.14□□□□□ -0.31
CLIP4-206ENST00000438819 POLA2Q14181 598 aa13.01□□□□□ -0.33
CLIP4-206ENST00000438819 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
CLIP4-206ENST00000438819 ZBTB12Q9Y330 459 aaPredicted RBP12.81□□□□□ -0.36
CLIP4-206ENST00000438819 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
CLIP4-206ENST00000438819 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
CLIP4-206ENST00000438819 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
CLIP4-206ENST00000438819 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
CLIP4-206ENST00000438819 FBLN2P98095 1184 aa12.63□□□□□ -0.39
CLIP4-206ENST00000438819 PROM2Q8N271 834 aa12.61□□□□□ -0.39
CLIP4-206ENST00000438819 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
CLIP4-206ENST00000438819 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
CLIP4-206ENST00000438819 AKT1S1Q96B36 256 aa12.46□□□□□ -0.41
CLIP4-206ENST00000438819 SPDYE2BA6NHP3 402 aa12.42□□□□□ -0.42
CLIP4-206ENST00000438819 SPDYE6P0CI01 402 aa12.42□□□□□ -0.42
CLIP4-206ENST00000438819 SPDYE2Q495Y8 402 aa12.42□□□□□ -0.42
CLIP4-206ENST00000438819 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-206ENST00000438819 REM2Q8IYK8 340 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-206ENST00000438819 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-206ENST00000438819 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
CLIP4-206ENST00000438819 POTEHQ6S545 545 aa12.25□□□□□ -0.45
CLIP4-206ENST00000438819 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
CLIP4-206ENST00000438819 PLCB2Q00722 1185 aa12.21□□□□□ -0.45
CLIP4-206ENST00000438819 PKD2Q13563 968 aa12.21□□□□□ -0.45
CLIP4-206ENST00000438819 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
CLIP4-206ENST00000438819 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
CLIP4-206ENST00000438819 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
CLIP4-206ENST00000438819 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
CLIP4-206ENST00000438819 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
CLIP4-206ENST00000438819 KLHL34Q8N239 644 aa12.13□□□□□ -0.47
CLIP4-206ENST00000438819 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
CLIP4-206ENST00000438819 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
CLIP4-206ENST00000438819 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
CLIP4-206ENST00000438819 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
CLIP4-206ENST00000438819 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
CLIP4-206ENST00000438819 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLIP4-206ENST00000438819 ECM2O94769 699 aaPredicted RBP12□□□□□ -0.49
CLIP4-206ENST00000438819 MIER1Q8N108 512 aa12□□□□□ -0.49
CLIP4-206ENST00000438819 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
CLIP4-206ENST00000438819 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
CLIP4-206ENST00000438819 NPM1P06748 294 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLIP4-206ENST00000438819 PRKAR2AP13861 404 aaKnown RBP11.89□□□□□ -0.51
CLIP4-206ENST00000438819 VSIG10Q8N0Z9 540 aa11.89□□□□□ -0.51
CLIP4-206ENST00000438819 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
CLIP4-206ENST00000438819 RGL2O15211 777 aa11.88□□□□□ -0.51
CLIP4-206ENST00000438819 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
CLIP4-206ENST00000438819 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-206ENST00000438819 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
CLIP4-206ENST00000438819 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
CLIP4-206ENST00000438819 CHADLQ6NUI6 762 aa11.79□□□□□ -0.52
CLIP4-206ENST00000438819 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms