RNA–Protein interactions for RNA: ENST00000436760.1

KPNA3-202, Transcript of karyopherin subunit alpha 3, humanhuman

TSL 2

Gene KPNA3, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-202ENST00000436760 ATP1B4Q9UN42 357 aaPredicted RBP9.1□□□□□ -0.95
KPNA3-202ENST00000436760 LILRB3O75022 631 aa9.09□□□□□ -0.95
KPNA3-202ENST00000436760 MCM6Q14566 821 aa9.09□□□□□ -0.95
KPNA3-202ENST00000436760 PRPF38BQ5VTL8 546 aaKnown RBP9.09□□□□□ -0.95
KPNA3-202ENST00000436760 PCDHB15Q9Y5E8 787 aa9.09□□□□□ -0.95
KPNA3-202ENST00000436760 CFHP08603 1231 aa9.08□□□□□ -0.96
KPNA3-202ENST00000436760 QPCTQ16769 361 aa9.08□□□□□ -0.96
KPNA3-202ENST00000436760 BANK1Q8NDB2 785 aa9.08□□□□□ -0.96
KPNA3-202ENST00000436760 PDZRN3Q9UPQ7 1066 aa9.08□□□□□ -0.96
KPNA3-202ENST00000436760 FDX1P10109 184 aa9.07□□□□□ -0.96
KPNA3-202ENST00000436760 TMEM259Q4ZIN3 620 aa9.07□□□□□ -0.96
KPNA3-202ENST00000436760 NECTIN2Q92692 538 aa9.07□□□□□ -0.96
KPNA3-202ENST00000436760 FUT2Q10981 343 aa9.06□□□□□ -0.96
KPNA3-202ENST00000436760 ZNF775Q96BV0 537 aaPredicted RBP9.06□□□□□ -0.96
KPNA3-202ENST00000436760 PCDHGC3Q9UN70 934 aa9.06□□□□□ -0.96
KPNA3-202ENST00000436760 CSPP1Q1MSJ5 1256 aa9.05□□□□□ -0.96
KPNA3-202ENST00000436760 GRIPAP1Q4V328 841 aa9.05□□□□□ -0.96
KPNA3-202ENST00000436760 ZNF516Q92618 1163 aa9.05□□□□□ -0.96
KPNA3-202ENST00000436760 HLA-CQ95604 372 aa9.05□□□□□ -0.96
KPNA3-202ENST00000436760 SPDYE5A6NIY4 337 aa9.04□□□□□ -0.96
KPNA3-202ENST00000436760 RNF40O75150 1001 aa9.04□□□□□ -0.96
KPNA3-202ENST00000436760 HRCP23327 699 aa9.04□□□□□ -0.96
KPNA3-202ENST00000436760 GGCXP38435 758 aa9.04□□□□□ -0.96
KPNA3-202ENST00000436760 ATP6V1AP38606 617 aa9.04□□□□□ -0.96
KPNA3-202ENST00000436760 GUCA2AQ02747 115 aa9.04□□□□□ -0.96
KPNA3-202ENST00000436760 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
KPNA3-202ENST00000436760 RTL5Q5HYW3 569 aaPredicted RBP9.04□□□□□ -0.96
KPNA3-202ENST00000436760 ZBTB3Q9H5J0 574 aa9.04□□□□□ -0.96
KPNA3-202ENST00000436760 ACTN4O43707 911 aaKnown RBP9.03□□□□□ -0.96
KPNA3-202ENST00000436760 CABLES1Q8TDN4 633 aa9.03□□□□□ -0.96
KPNA3-202ENST00000436760 A6NJR5 290 aa9.02□□□□□ -0.97
KPNA3-202ENST00000436760 APLP1P51693 650 aa9.02□□□□□ -0.97
KPNA3-202ENST00000436760 NUTM2BA6NNL0 878 aaPredicted RBP9.01□□□□□ -0.97
KPNA3-202ENST00000436760 NUTM2EB1AL46 878 aaPredicted RBP9.01□□□□□ -0.97
KPNA3-202ENST00000436760 SOCS7O14512 581 aa9.01□□□□□ -0.97
KPNA3-202ENST00000436760 MORN1Q5T089 497 aa9.01□□□□□ -0.97
KPNA3-202ENST00000436760 NUTM2DQ5VT03 806 aaPredicted RBP9.01□□□□□ -0.97
KPNA3-202ENST00000436760 NUTM2AQ8IVF1 878 aaPredicted RBP9.01□□□□□ -0.97
KPNA3-202ENST00000436760 PRR14Q9BWN1 585 aa9.01□□□□□ -0.97
KPNA3-202ENST00000436760 SNRKQ9NRH2 765 aa9.01□□□□□ -0.97
KPNA3-202ENST00000436760 UBTFP17480 764 aaKnown RBP9□□□□□ -0.97
KPNA3-202ENST00000436760 MTMR2Q13614 643 aa9□□□□□ -0.97
KPNA3-202ENST00000436760 SUPT5HO00267 1087 aaKnown RBP8.99□□□□□ -0.97
KPNA3-202ENST00000436760 NKX2-3Q8TAU0 364 aa8.99□□□□□ -0.97
KPNA3-202ENST00000436760 CLUAP1Q96AJ1 413 aa8.99□□□□□ -0.97
KPNA3-202ENST00000436760 AP1G2O75843 785 aa8.97□□□□□ -0.97
KPNA3-202ENST00000436760 TRIM67Q6ZTA4 783 aa8.97□□□□□ -0.97
KPNA3-202ENST00000436760 MTMR14Q8NCE2 650 aa8.97□□□□□ -0.97
KPNA3-202ENST00000436760 PUS10Q3MIT2 529 aaKnown RBP8.96□□□□□ -0.98
KPNA3-202ENST00000436760 SLC27A5Q9Y2P5 690 aa8.96□□□□□ -0.98
KPNA3-202ENST00000436760 C6orf229H3BNL8 230 aa8.95□□□□□ -0.98
KPNA3-202ENST00000436760 DGAT1O75907 488 aa8.95□□□□□ -0.98
KPNA3-202ENST00000436760 USP17L8P0C7I0 530 aa8.95□□□□□ -0.98
KPNA3-202ENST00000436760 POM121Q96HA1 1249 aa8.95□□□□□ -0.98
KPNA3-202ENST00000436760 COG6Q9Y2V7 657 aa8.95□□□□□ -0.98
KPNA3-202ENST00000436760 SALL2Q9Y467 1007 aaPredicted RBP8.95□□□□□ -0.98
KPNA3-202ENST00000436760 CFAP99D6REC4 459 aa8.94□□□□□ -0.98
KPNA3-202ENST00000436760 TRAK2O60296 914 aa8.94□□□□□ -0.98
KPNA3-202ENST00000436760 PRR20EP86478 221 aa8.94□□□□□ -0.98
KPNA3-202ENST00000436760 PRR20CP86479 221 aa8.94□□□□□ -0.98
KPNA3-202ENST00000436760 PRR20DP86480 221 aa8.94□□□□□ -0.98
KPNA3-202ENST00000436760 PRR20BP86481 221 aa8.94□□□□□ -0.98
KPNA3-202ENST00000436760 PRR20AP86496 221 aa8.94□□□□□ -0.98
KPNA3-202ENST00000436760 Q3C1V9 767 aa8.94□□□□□ -0.98
KPNA3-202ENST00000436760 FNBP4Q8N3X1 1017 aaPredicted RBP8.94□□□□□ -0.98
KPNA3-202ENST00000436760 SYMPKQ92797 1274 aaKnown RBP8.94□□□□□ -0.98
KPNA3-202ENST00000436760 RAD21O60216 631 aa8.93□□□□□ -0.98
KPNA3-202ENST00000436760 ZPR1O75312 459 aa8.93□□□□□ -0.98
KPNA3-202ENST00000436760 CTDSPL2Q05D32 466 aa8.93□□□□□ -0.98
KPNA3-202ENST00000436760 RETREG3Q86VR2 466 aa8.93□□□□□ -0.98
KPNA3-202ENST00000436760 APBB1O00213 710 aa8.92□□□□□ -0.98
KPNA3-202ENST00000436760 MYT1Q01538 1121 aa8.92□□□□□ -0.98
KPNA3-202ENST00000436760 PROSER2Q86WR7 435 aaPredicted RBP8.92□□□□□ -0.98
KPNA3-202ENST00000436760 HELBQ8NG08 1087 aaPredicted RBP8.92□□□□□ -0.98
KPNA3-202ENST00000436760 PRR7Q8TB68 274 aa8.92□□□□□ -0.98
KPNA3-202ENST00000436760 GJD4Q96KN9 370 aaPredicted RBP8.92□□□□□ -0.98
KPNA3-202ENST00000436760 PCDHB3Q9Y5E6 796 aa8.92□□□□□ -0.98
KPNA3-202ENST00000436760 SLC19A1P41440 591 aa8.91□□□□□ -0.98
KPNA3-202ENST00000436760 COPS2P61201 443 aa8.91□□□□□ -0.98
KPNA3-202ENST00000436760 PKDCCQ504Y2 493 aa8.91□□□□□ -0.98
KPNA3-202ENST00000436760 DESI1Q6ICB0 168 aa8.91□□□□□ -0.98
KPNA3-202ENST00000436760 BRICD5Q6PL45 260 aa8.91□□□□□ -0.98
KPNA3-202ENST00000436760 SCUBE3Q8IX30 993 aa8.91□□□□□ -0.98
KPNA3-202ENST00000436760 THAP11Q96EK4 314 aa8.91□□□□□ -0.98
KPNA3-202ENST00000436760 BLOC1S3Q6QNY0 202 aa8.9□□□□□ -0.98
KPNA3-202ENST00000436760 EMID1Q96A84 441 aaPredicted RBP8.9□□□□□ -0.98
KPNA3-202ENST00000436760 RNF223E7ERA6 249 aa8.89□□□□□ -0.99
KPNA3-202ENST00000436760 NR1I2O75469 434 aa8.89□□□□□ -0.99
KPNA3-202ENST00000436760 SPRYD7Q5W111 196 aa8.89□□□□□ -0.99
KPNA3-202ENST00000436760 RNF19BQ6ZMZ0 732 aa8.89□□□□□ -0.99
KPNA3-202ENST00000436760 C1orf115Q9H7X2 142 aa8.89□□□□□ -0.99
KPNA3-202ENST00000436760 ZNF598Q86UK7 904 aaKnown RBP8.88□□□□□ -0.99
KPNA3-202ENST00000436760 USB1Q9BQ65 265 aaKnown RBP8.88□□□□□ -0.99
KPNA3-202ENST00000436760 TRIM34Q9BYJ4 488 aa8.88□□□□□ -0.99
KPNA3-202ENST00000436760 GDPD2Q9HCC8 539 aa8.88□□□□□ -0.99
KPNA3-202ENST00000436760 PRM3Q9NNZ6 103 aa8.88□□□□□ -0.99
KPNA3-202ENST00000436760 HMX1Q9NP08 348 aaPredicted RBP8.88□□□□□ -0.99
KPNA3-202ENST00000436760 FMNL1O95466 1100 aaPredicted RBP8.87□□□□□ -0.99
KPNA3-202ENST00000436760 LCE2AQ5TA79 106 aaPredicted RBP8.87□□□□□ -0.99
KPNA3-202ENST00000436760 LRRN4Q8WUT4 740 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms