RNA–Protein interactions for RNA: ENST00000436760.1

KPNA3-202, Transcript of karyopherin subunit alpha 3, humanhuman

TSL 2

Gene KPNA3, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-202ENST00000436760 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
KPNA3-202ENST00000436760 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
KPNA3-202ENST00000436760 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
KPNA3-202ENST00000436760 PHF23Q9BUL5 403 aaPredicted RBP20.4■□□□□ 0.86
KPNA3-202ENST00000436760 FOXD1Q16676 465 aa19.36■□□□□ 0.69
KPNA3-202ENST00000436760 POTEDQ86YR6 584 aa18.49■□□□□ 0.55
KPNA3-202ENST00000436760 MSH5O43196 834 aa18.33■□□□□ 0.52
KPNA3-202ENST00000436760 PIAS4Q8N2W9 510 aaPredicted RBP17.98■□□□□ 0.47
KPNA3-202ENST00000436760 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
KPNA3-202ENST00000436760 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
KPNA3-202ENST00000436760 ADRA2BP18089 450 aa17.67■□□□□ 0.42
KPNA3-202ENST00000436760 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
KPNA3-202ENST00000436760 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
KPNA3-202ENST00000436760 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
KPNA3-202ENST00000436760 CACNB1Q02641 598 aaPredicted RBP15.89■□□□□ 0.13
KPNA3-202ENST00000436760 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
KPNA3-202ENST00000436760 PPP4R3CPQ6ZMV5 832 aa15.64■□□□□ 0.09
KPNA3-202ENST00000436760 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
KPNA3-202ENST00000436760 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
KPNA3-202ENST00000436760 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
KPNA3-202ENST00000436760 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
KPNA3-202ENST00000436760 C1QBPQ07021 282 aaKnown RBP15.36■□□□□ 0.05
KPNA3-202ENST00000436760 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
KPNA3-202ENST00000436760 KCNA4P22459 653 aa15.1■□□□□ 0.01
KPNA3-202ENST00000436760 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
KPNA3-202ENST00000436760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.85□□□□□ -0.03
KPNA3-202ENST00000436760 NPM3O75607 178 aaKnown RBP14.7□□□□□ -0.06
KPNA3-202ENST00000436760 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
KPNA3-202ENST00000436760 DSG3P32926 999 aa14.45□□□□□ -0.1
KPNA3-202ENST00000436760 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
KPNA3-202ENST00000436760 POTEHQ6S545 545 aa14.42□□□□□ -0.1
KPNA3-202ENST00000436760 SPINK5Q9NQ38 1064 aaPredicted RBP14.39□□□□□ -0.11
KPNA3-202ENST00000436760 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
KPNA3-202ENST00000436760 CAPN15O75808 1086 aa14.37□□□□□ -0.11
KPNA3-202ENST00000436760 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
KPNA3-202ENST00000436760 APLP2Q06481 763 aa14.15□□□□□ -0.14
KPNA3-202ENST00000436760 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
KPNA3-202ENST00000436760 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
KPNA3-202ENST00000436760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.03□□□□□ -0.16
KPNA3-202ENST00000436760 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
KPNA3-202ENST00000436760 HNRNPUL2Q1KMD3 747 aaKnown RBP14.03□□□□□ -0.16
KPNA3-202ENST00000436760 ABCB7O75027 752 aa13.98□□□□□ -0.17
KPNA3-202ENST00000436760 ZBTB22O15209 634 aa13.92□□□□□ -0.18
KPNA3-202ENST00000436760 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
KPNA3-202ENST00000436760 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
KPNA3-202ENST00000436760 FOXD4L1Q9NU39 408 aa13.8□□□□□ -0.2
KPNA3-202ENST00000436760 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
KPNA3-202ENST00000436760 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
KPNA3-202ENST00000436760 POLA2Q14181 598 aa13.6□□□□□ -0.23
KPNA3-202ENST00000436760 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
KPNA3-202ENST00000436760 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
KPNA3-202ENST00000436760 SP7Q8TDD2 431 aaPredicted RBP13.34□□□□□ -0.27
KPNA3-202ENST00000436760 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
KPNA3-202ENST00000436760 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
KPNA3-202ENST00000436760 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
KPNA3-202ENST00000436760 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
KPNA3-202ENST00000436760 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
KPNA3-202ENST00000436760 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
KPNA3-202ENST00000436760 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
KPNA3-202ENST00000436760 HAX1O00165 279 aa13.04□□□□□ -0.32
KPNA3-202ENST00000436760 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
KPNA3-202ENST00000436760 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
KPNA3-202ENST00000436760 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
KPNA3-202ENST00000436760 EVX2Q03828 476 aa12.85□□□□□ -0.35
KPNA3-202ENST00000436760 FBLN2P98095 1184 aa12.84□□□□□ -0.35
KPNA3-202ENST00000436760 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
KPNA3-202ENST00000436760 PRKAR2AP13861 404 aaKnown RBP12.75□□□□□ -0.37
KPNA3-202ENST00000436760 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
KPNA3-202ENST00000436760 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
KPNA3-202ENST00000436760 FKBP8Q14318 412 aa12.71□□□□□ -0.37
KPNA3-202ENST00000436760 MKRN4PQ13434 485 aaPredicted RBP12.68□□□□□ -0.38
KPNA3-202ENST00000436760 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
KPNA3-202ENST00000436760 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
KPNA3-202ENST00000436760 GABBR2O75899 941 aa12.58□□□□□ -0.4
KPNA3-202ENST00000436760 LHX8Q68G74 356 aa12.49□□□□□ -0.41
KPNA3-202ENST00000436760 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
KPNA3-202ENST00000436760 PRR29P0C7W0 189 aa12.47□□□□□ -0.41
KPNA3-202ENST00000436760 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
KPNA3-202ENST00000436760 CLCN6P51797 869 aa12.38□□□□□ -0.43
KPNA3-202ENST00000436760 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
KPNA3-202ENST00000436760 CD44P16070 742 aaKnown RBP12.33□□□□□ -0.44
KPNA3-202ENST00000436760 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
KPNA3-202ENST00000436760 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
KPNA3-202ENST00000436760 PROM2Q8N271 834 aa12.3□□□□□ -0.44
KPNA3-202ENST00000436760 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
KPNA3-202ENST00000436760 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
KPNA3-202ENST00000436760 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
KPNA3-202ENST00000436760 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
KPNA3-202ENST00000436760 DCBLD2Q96PD2 775 aa12.15□□□□□ -0.46
KPNA3-202ENST00000436760 CREBZFQ9NS37 354 aa12.09□□□□□ -0.47
KPNA3-202ENST00000436760 STAG3Q9UJ98 1225 aa12.09□□□□□ -0.47
KPNA3-202ENST00000436760 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
KPNA3-202ENST00000436760 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
KPNA3-202ENST00000436760 GALR2O43603 387 aaPredicted RBP11.99□□□□□ -0.49
KPNA3-202ENST00000436760 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
KPNA3-202ENST00000436760 OTUD5Q96G74 571 aa11.93□□□□□ -0.5
KPNA3-202ENST00000436760 PLSCR2Q9NRY7 297 aa11.92□□□□□ -0.5
KPNA3-202ENST00000436760 POTEB2H3BUK9 544 aa11.88□□□□□ -0.51
KPNA3-202ENST00000436760 IFNLR1Q8IU57 520 aaPredicted RBP11.88□□□□□ -0.51
KPNA3-202ENST00000436760 NPM1P06748 294 aaKnown RBP eCLIP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms