RNA–Protein interactions for RNA: ENST00000434054.6

CLCN2-204, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCN2, Length 2,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-204ENST00000434054 KIF13AQ9H1H9 1805 aa22.19■■□□□ 1.14
CLCN2-204ENST00000434054 DEPDC5O75140 1603 aa22.19■■□□□ 1.14
CLCN2-204ENST00000434054 ASXL1Q8IXJ9 1541 aa22.19■■□□□ 1.14
CLCN2-204ENST00000434054 EIF2AK4Q9P2K8 1649 aaKnown RBP22.19■■□□□ 1.14
CLCN2-204ENST00000434054 WWC1Q8IX03 1113 aa22.18■■□□□ 1.14
CLCN2-204ENST00000434054 LAMC1P11047 1609 aa22.18■■□□□ 1.14
CLCN2-204ENST00000434054 CEP152O94986 1710 aa22.17■■□□□ 1.14
CLCN2-204ENST00000434054 RLBP1P12271 317 aa22.17■■□□□ 1.14
CLCN2-204ENST00000434054 PCDHB15Q9Y5E8 787 aa22.16■■□□□ 1.14
CLCN2-204ENST00000434054 PIK3C2GO75747 1445 aa22.16■■□□□ 1.14
CLCN2-204ENST00000434054 NPATQ14207 1427 aa22.16■■□□□ 1.14
CLCN2-204ENST00000434054 FBXO31Q5XUX0 539 aaPredicted RBP22.15■■□□□ 1.14
CLCN2-204ENST00000434054 TET3O43151 1660 aa22.15■■□□□ 1.14
CLCN2-204ENST00000434054 CGNL1Q0VF96 1302 aa22.15■■□□□ 1.14
CLCN2-204ENST00000434054 VWDEQ8N2E2 1590 aa22.14■■□□□ 1.13
CLCN2-204ENST00000434054 SCAF11Q99590 1463 aaKnown RBP22.13■■□□□ 1.13
CLCN2-204ENST00000434054 PDE3AQ14432 1141 aa22.12■■□□□ 1.13
CLCN2-204ENST00000434054 PTPRTO14522 1441 aa22.12■■□□□ 1.13
CLCN2-204ENST00000434054 EFCAB6Q5THR3 1501 aa22.11■■□□□ 1.13
CLCN2-204ENST00000434054 CLTCL1P53675 1640 aa22.11■■□□□ 1.13
CLCN2-204ENST00000434054 GZF1Q9H116 711 aaPredicted RBP22.11■■□□□ 1.13
CLCN2-204ENST00000434054 BECN1Q14457 450 aa22.11■■□□□ 1.13
CLCN2-204ENST00000434054 TRPM2O94759 1503 aa22.11■■□□□ 1.13
CLCN2-204ENST00000434054 ABCC3O15438 1527 aa22.09■■□□□ 1.13
CLCN2-204ENST00000434054 ESF1Q9H501 851 aaKnown RBP22.09■■□□□ 1.13
CLCN2-204ENST00000434054 ADGRF5Q8IZF2 1346 aa22.09■■□□□ 1.13
CLCN2-204ENST00000434054 RNF17Q9BXT8 1623 aaKnown RBP22.09■■□□□ 1.13
CLCN2-204ENST00000434054 SPHKAPQ2M3C7 1700 aa22.09■■□□□ 1.13
CLCN2-204ENST00000434054 PDZRN3Q9UPQ7 1066 aa22.09■■□□□ 1.13
CLCN2-204ENST00000434054 MAPK8IP3Q9UPT6 1336 aa22.09■■□□□ 1.13
CLCN2-204ENST00000434054 RARSP54136 660 aaKnown RBP22.09■■□□□ 1.13
CLCN2-204ENST00000434054 MADDQ8WXG6 1647 aa22.08■■□□□ 1.13
CLCN2-204ENST00000434054 TCP11L2Q8N4U5 519 aa22.08■■□□□ 1.13
CLCN2-204ENST00000434054 TBC1D2Q9BYX2 928 aa22.08■■□□□ 1.12
CLCN2-204ENST00000434054 SYNMO15061 1565 aa22.07■■□□□ 1.12
CLCN2-204ENST00000434054 SLC12A5Q9H2X9 1139 aa22.06■■□□□ 1.12
CLCN2-204ENST00000434054 DNAJC5Q9H3Z4 198 aa22.06■■□□□ 1.12
CLCN2-204ENST00000434054 MORC1Q86VD1 984 aa22.05■■□□□ 1.12
CLCN2-204ENST00000434054 IDI1Q13907 227 aa22.05■■□□□ 1.12
CLCN2-204ENST00000434054 ANTXR1Q9H6X2 564 aa22.05■■□□□ 1.12
CLCN2-204ENST00000434054 IQGAP1P46940 1657 aa22.04■■□□□ 1.12
CLCN2-204ENST00000434054 UPF2Q9HAU5 1272 aaKnown RBP22.04■■□□□ 1.12
CLCN2-204ENST00000434054 STAG3Q9UJ98 1225 aa22.04■■□□□ 1.12
CLCN2-204ENST00000434054 FAM43AQ8N2R8 423 aa22.03■■□□□ 1.12
CLCN2-204ENST00000434054 RRAGDQ9NQL2 400 aaPredicted RBP22.03■■□□□ 1.12
CLCN2-204ENST00000434054 TRAK1Q9UPV9 953 aa22.03■■□□□ 1.12
CLCN2-204ENST00000434054 MYOM1P52179 1685 aa22.02■■□□□ 1.12
CLCN2-204ENST00000434054 NLRP1Q9C000 1473 aa22.02■■□□□ 1.11
CLCN2-204ENST00000434054 TBC1D32Q96NH3 1257 aa22.01■■□□□ 1.11
CLCN2-204ENST00000434054 NPC1L1Q9UHC9 1359 aa22.01■■□□□ 1.11
CLCN2-204ENST00000434054 LMTK2Q8IWU2 1503 aa22.01■■□□□ 1.11
CLCN2-204ENST00000434054 ERVK-7P63135 1459 aa22■■□□□ 1.11
CLCN2-204ENST00000434054 MTHFSP49914 203 aa22■■□□□ 1.11
CLCN2-204ENST00000434054 MFAP1P55081 439 aaKnown RBP22■■□□□ 1.11
CLCN2-204ENST00000434054 PMFBP1Q8TBY8 1022 aa22■■□□□ 1.11
CLCN2-204ENST00000434054 PANK2Q9BZ23 570 aa21.99■■□□□ 1.11
CLCN2-204ENST00000434054 RUNDC1Q96C34 613 aa21.98■■□□□ 1.11
CLCN2-204ENST00000434054 TSR2Q969E8 191 aaKnown RBP21.98■■□□□ 1.11
CLCN2-204ENST00000434054 NOS1P29475 1434 aa21.98■■□□□ 1.11
CLCN2-204ENST00000434054 TMEM132EQ6IEE7 984 aa21.97■■□□□ 1.11
CLCN2-204ENST00000434054 CAMSAP1Q5T5Y3 1602 aa21.97■■□□□ 1.11
CLCN2-204ENST00000434054 SIGLEC1Q9BZZ2 1709 aa21.96■■□□□ 1.11
CLCN2-204ENST00000434054 NSD3Q9BZ95 1437 aa21.96■■□□□ 1.11
CLCN2-204ENST00000434054 RWDD1Q9H446 243 aaPredicted RBP21.94■■□□□ 1.1
CLCN2-204ENST00000434054 U2AF1L5P0DN76 240 aaPredicted RBP21.94■■□□□ 1.1
CLCN2-204ENST00000434054 XRCC6P12956 609 aaKnown RBP eCLIP21.94■■□□□ 1.1
CLCN2-204ENST00000434054 CEBPAP49715 358 aaPredicted RBP21.94■■□□□ 1.1
CLCN2-204ENST00000434054 U2AF1Q01081 240 aaKnown RBP eCLIP21.94■■□□□ 1.1
CLCN2-204ENST00000434054 FTSJ3Q8IY81 847 aaKnown RBP21.94■■□□□ 1.1
CLCN2-204ENST00000434054 KDM5AP29375 1690 aaKnown RBP21.94■■□□□ 1.1
CLCN2-204ENST00000434054 POLR3AO14802 1390 aaPredicted RBP21.93■■□□□ 1.1
CLCN2-204ENST00000434054 ARHGEF40Q8TER5 1519 aa21.91■■□□□ 1.1
CLCN2-204ENST00000434054 MROH2AA6NES4 1674 aa21.91■■□□□ 1.1
CLCN2-204ENST00000434054 RSPH6AQ9H0K4 717 aa21.91■■□□□ 1.1
CLCN2-204ENST00000434054 C22orf23Q9BZE7 217 aa21.9■■□□□ 1.1
CLCN2-204ENST00000434054 VIRMAQ69YN4 1812 aaKnown RBP21.9■■□□□ 1.1
CLCN2-204ENST00000434054 MCM4P33991 863 aa21.9■■□□□ 1.1
CLCN2-204ENST00000434054 SAFB2Q14151 953 aaKnown RBP eCLIP21.9■■□□□ 1.1
CLCN2-204ENST00000434054 MVPQ14764 893 aaKnown RBP21.89■■□□□ 1.1
CLCN2-204ENST00000434054 NGEFQ8N5V2 710 aa21.89■■□□□ 1.1
CLCN2-204ENST00000434054 KIF1BO60333 1816 aa21.89■■□□□ 1.1
CLCN2-204ENST00000434054 SLC52A1Q9NWF4 448 aa21.89■■□□□ 1.09
CLCN2-204ENST00000434054 NINLQ9Y2I6 1382 aa21.89■■□□□ 1.09
CLCN2-204ENST00000434054 GOLGA6L3A6NEY3 463 aa21.89■■□□□ 1.09
CLCN2-204ENST00000434054 L1TD1Q5T7N2 865 aaKnown RBP21.89■■□□□ 1.09
CLCN2-204ENST00000434054 ITPRIPQ8IWB1 547 aa21.88■■□□□ 1.09
CLCN2-204ENST00000434054 DZIP1LQ8IYY4 767 aaKnown RBP21.87■■□□□ 1.09
CLCN2-204ENST00000434054 SMC4Q9NTJ3 1288 aa21.87■■□□□ 1.09
CLCN2-204ENST00000434054 CLTCQ00610 1675 aaKnown RBP21.87■■□□□ 1.09
CLCN2-204ENST00000434054 STAC3Q96MF2 364 aa21.87■■□□□ 1.09
CLCN2-204ENST00000434054 WDR63Q8IWG1 891 aa21.86■■□□□ 1.09
CLCN2-204ENST00000434054 STK26Q9P289 416 aa21.86■■□□□ 1.09
CLCN2-204ENST00000434054 ZMYM3Q14202 1370 aa21.86■■□□□ 1.09
CLCN2-204ENST00000434054 U2SURPO15042 1029 aaKnown RBP21.86■■□□□ 1.09
CLCN2-204ENST00000434054 ZKSCAN2Q63HK3 967 aa21.86■■□□□ 1.09
CLCN2-204ENST00000434054 ARHGAP31Q2M1Z3 1444 aa21.86■■□□□ 1.09
CLCN2-204ENST00000434054 EXOSC9Q06265 439 aaKnown RBP21.85■■□□□ 1.09
CLCN2-204ENST00000434054 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
CLCN2-204ENST00000434054 TRAK2O60296 914 aa21.84■■□□□ 1.09
CLCN2-204ENST00000434054 ADGRB3O60242 1522 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms