RNA–Protein interactions for RNA: ENST00000433094.1

LINC00494-203, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best)

Gene LINC00494, Length 3,071 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-203ENST00000433094 RGL3Q3MIN7 710 aa12.51□□□□□ -0.41
LINC00494-203ENST00000433094 CCDC144AA2RUR9 1427 aa12.51□□□□□ -0.41
LINC00494-203ENST00000433094 BAG4O95429 457 aaKnown RBP12.51□□□□□ -0.41
LINC00494-203ENST00000433094 TMEM51Q9NW97 253 aa12.51□□□□□ -0.41
LINC00494-203ENST00000433094 DNMT1P26358 1616 aaKnown RBP12.51□□□□□ -0.41
LINC00494-203ENST00000433094 SCAPERQ9BY12 1400 aa12.51□□□□□ -0.41
LINC00494-203ENST00000433094 ZSCAN23Q3MJ62 389 aa12.51□□□□□ -0.41
LINC00494-203ENST00000433094 TSC1Q92574 1164 aa12.51□□□□□ -0.41
LINC00494-203ENST00000433094 BCL2L13Q9BXK5 485 aa12.51□□□□□ -0.41
LINC00494-203ENST00000433094 CCDC39Q9UFE4 941 aa12.51□□□□□ -0.41
LINC00494-203ENST00000433094 COL17A1Q9UMD9 1497 aaPredicted RBP12.5□□□□□ -0.41
LINC00494-203ENST00000433094 JARID2Q92833 1246 aaPredicted RBP12.5□□□□□ -0.41
LINC00494-203ENST00000433094 CDK13Q14004 1512 aaKnown RBP12.5□□□□□ -0.41
LINC00494-203ENST00000433094 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
LINC00494-203ENST00000433094 RARSP54136 660 aaKnown RBP12.5□□□□□ -0.41
LINC00494-203ENST00000433094 MYRIPQ8NFW9 859 aa12.5□□□□□ -0.41
LINC00494-203ENST00000433094 MCTP1Q6DN14 999 aa12.49□□□□□ -0.41
LINC00494-203ENST00000433094 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
LINC00494-203ENST00000433094 ABCA10Q8WWZ4 1543 aa12.48□□□□□ -0.41
LINC00494-203ENST00000433094 CUL7Q14999 1698 aa12.48□□□□□ -0.41
LINC00494-203ENST00000433094 TAF7LQ5H9L4 462 aa12.48□□□□□ -0.41
LINC00494-203ENST00000433094 ERBINQ96RT1 1412 aa12.48□□□□□ -0.41
LINC00494-203ENST00000433094 K7ELQ4 463 aaPredicted RBP12.48□□□□□ -0.41
LINC00494-203ENST00000433094 PTMAP06454 111 aaKnown RBP12.48□□□□□ -0.41
LINC00494-203ENST00000433094 ATP2B3Q16720 1220 aa12.48□□□□□ -0.41
LINC00494-203ENST00000433094 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
LINC00494-203ENST00000433094 IPO4Q8TEX9 1081 aaKnown RBP12.48□□□□□ -0.41
LINC00494-203ENST00000433094 VGLL3A8MV65 326 aa12.47□□□□□ -0.41
LINC00494-203ENST00000433094 CD2BP2O95400 341 aaKnown RBP12.47□□□□□ -0.41
LINC00494-203ENST00000433094 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
LINC00494-203ENST00000433094 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
LINC00494-203ENST00000433094 CFDP1Q9UEE9 299 aaPredicted RBP12.47□□□□□ -0.41
LINC00494-203ENST00000433094 CLEC17AQ6ZS10 378 aa12.47□□□□□ -0.41
LINC00494-203ENST00000433094 NGEFQ8N5V2 710 aa12.47□□□□□ -0.41
LINC00494-203ENST00000433094 KIAA2012Q0VF49 1180 aa12.46□□□□□ -0.41
LINC00494-203ENST00000433094 NEUROD2Q15784 382 aa12.46□□□□□ -0.41
LINC00494-203ENST00000433094 ANKRD50Q9ULJ7 1429 aa12.46□□□□□ -0.41
LINC00494-203ENST00000433094 GAS2L2Q8NHY3 880 aa12.46□□□□□ -0.42
LINC00494-203ENST00000433094 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.42
LINC00494-203ENST00000433094 SPDYE4A6NLX3 237 aa12.45□□□□□ -0.42
LINC00494-203ENST00000433094 IGSF3O75054 1194 aa12.45□□□□□ -0.42
LINC00494-203ENST00000433094 HMGN5P82970 282 aaKnown RBP12.45□□□□□ -0.42
LINC00494-203ENST00000433094 PRAG1Q86YV5 1406 aa12.45□□□□□ -0.42
LINC00494-203ENST00000433094 TAF3Q5VWG9 929 aa12.45□□□□□ -0.42
LINC00494-203ENST00000433094 PRIMPOLQ96LW4 560 aa12.45□□□□□ -0.42
LINC00494-203ENST00000433094 MVPQ14764 893 aaKnown RBP12.44□□□□□ -0.42
LINC00494-203ENST00000433094 CGNQ9P2M7 1197 aaKnown RBP12.44□□□□□ -0.42
LINC00494-203ENST00000433094 FAM177BA6PVY3 158 aa12.44□□□□□ -0.42
LINC00494-203ENST00000433094 FTSJ3Q8IY81 847 aaKnown RBP12.44□□□□□ -0.42
LINC00494-203ENST00000433094 RBM42Q9BTD8 480 aaKnown RBP12.44□□□□□ -0.42
LINC00494-203ENST00000433094 LMBRD1Q9NUN5 540 aa12.44□□□□□ -0.42
LINC00494-203ENST00000433094 KIF2CQ99661 725 aa12.43□□□□□ -0.42
LINC00494-203ENST00000433094 CDK11BP21127 795 aaKnown RBP12.43□□□□□ -0.42
LINC00494-203ENST00000433094 RNF214Q8ND24 703 aa12.43□□□□□ -0.42
LINC00494-203ENST00000433094 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
LINC00494-203ENST00000433094 KIF3AQ9Y496 699 aa12.43□□□□□ -0.42
LINC00494-203ENST00000433094 PLCD3Q8N3E9 789 aa12.43□□□□□ -0.42
LINC00494-203ENST00000433094 MAGI2Q86UL8 1455 aa12.43□□□□□ -0.42
LINC00494-203ENST00000433094 PIK3C2GO75747 1445 aa12.42□□□□□ -0.42
LINC00494-203ENST00000433094 GPRASP1Q5JY77 1395 aa12.42□□□□□ -0.42
LINC00494-203ENST00000433094 PRPF40AO75400 957 aaKnown RBP12.42□□□□□ -0.42
LINC00494-203ENST00000433094 ZNF830Q96NB3 372 aaPredicted RBP12.42□□□□□ -0.42
LINC00494-203ENST00000433094 PAXIP1Q6ZW49 1069 aaPredicted RBP12.42□□□□□ -0.42
LINC00494-203ENST00000433094 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
LINC00494-203ENST00000433094 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
LINC00494-203ENST00000433094 NUCB2P80303 420 aa12.41□□□□□ -0.42
LINC00494-203ENST00000433094 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00494-203ENST00000433094 POLA1P09884 1462 aaPredicted RBP12.41□□□□□ -0.42
LINC00494-203ENST00000433094 ZBTB22O15209 634 aa12.41□□□□□ -0.42
LINC00494-203ENST00000433094 LRSAM1Q6UWE0 723 aa12.41□□□□□ -0.42
LINC00494-203ENST00000433094 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
LINC00494-203ENST00000433094 SYCE3A1L190 88 aa12.41□□□□□ -0.42
LINC00494-203ENST00000433094 GTF2F1P35269 517 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00494-203ENST00000433094 ZNF771Q7L3S4 317 aaPredicted RBP12.41□□□□□ -0.42
LINC00494-203ENST00000433094 PDCL2Q8N4E4 241 aa12.41□□□□□ -0.42
LINC00494-203ENST00000433094 HDAC1Q13547 482 aaPredicted RBP12.4□□□□□ -0.42
LINC00494-203ENST00000433094 DZIP1LQ8IYY4 767 aaKnown RBP12.4□□□□□ -0.42
LINC00494-203ENST00000433094 ZKSCAN2Q63HK3 967 aa12.4□□□□□ -0.42
LINC00494-203ENST00000433094 MPNDQ8N594 471 aa12.4□□□□□ -0.42
LINC00494-203ENST00000433094 KIF16BQ96L93 1317 aa12.4□□□□□ -0.42
LINC00494-203ENST00000433094 LNPKQ9C0E8 428 aa12.39□□□□□ -0.43
LINC00494-203ENST00000433094 ABCC2Q92887 1545 aa12.39□□□□□ -0.43
LINC00494-203ENST00000433094 NOLC1Q14978 699 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC00494-203ENST00000433094 GPT2Q8TD30 523 aa12.39□□□□□ -0.43
LINC00494-203ENST00000433094 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
LINC00494-203ENST00000433094 PRDM2Q13029 1718 aa12.39□□□□□ -0.43
LINC00494-203ENST00000433094 MRC2Q9UBG0 1479 aa12.39□□□□□ -0.43
LINC00494-203ENST00000433094 TMEM63CQ9P1W3 806 aa12.38□□□□□ -0.43
LINC00494-203ENST00000433094 U2AF2P26368 475 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC00494-203ENST00000433094 WDR7Q9Y4E6 1490 aa12.38□□□□□ -0.43
LINC00494-203ENST00000433094 PIBF1Q8WXW3 757 aa12.37□□□□□ -0.43
LINC00494-203ENST00000433094 TRPM1Q7Z4N2 1603 aa12.37□□□□□ -0.43
LINC00494-203ENST00000433094 ADGRL2O95490 1459 aa12.37□□□□□ -0.43
LINC00494-203ENST00000433094 PKP1Q13835 747 aa12.37□□□□□ -0.43
LINC00494-203ENST00000433094 ITPRIPQ8IWB1 547 aa12.37□□□□□ -0.43
LINC00494-203ENST00000433094 FAM135AQ9P2D6 1515 aa12.37□□□□□ -0.43
LINC00494-203ENST00000433094 CDCA8Q53HL2 280 aa12.36□□□□□ -0.43
LINC00494-203ENST00000433094 KDM5DQ9BY66 1539 aa12.36□□□□□ -0.43
LINC00494-203ENST00000433094 CEP170Q5SW79 1584 aa12.36□□□□□ -0.43
LINC00494-203ENST00000433094 PLXNC1O60486 1568 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms