RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 TRIM6-TRIM34B2RNG4 842 aa5.03□□□□□ -1.6
CCDC30-203ENST00000428554 SND1Q7KZF4 910 aaKnown RBP eCLIP5.03□□□□□ -1.6
CCDC30-203ENST00000428554 DRC1Q96MC2 740 aa5.03□□□□□ -1.6
CCDC30-203ENST00000428554 PNMA3Q9UL41 463 aa5.03□□□□□ -1.6
CCDC30-203ENST00000428554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.03□□□□□ -1.6
CCDC30-203ENST00000428554 TATDN2Q93075 761 aa5.03□□□□□ -1.6
CCDC30-203ENST00000428554 TBC1D2Q9BYX2 928 aa5.03□□□□□ -1.6
CCDC30-203ENST00000428554 USTQ9Y2C2 406 aa5.03□□□□□ -1.6
CCDC30-203ENST00000428554 CUX2O14529 1486 aa5.02□□□□□ -1.61
CCDC30-203ENST00000428554 PBX2P40425 430 aa5.02□□□□□ -1.61
CCDC30-203ENST00000428554 PSEN2P49810 448 aa5.02□□□□□ -1.61
CCDC30-203ENST00000428554 POTEEQ6S8J3 1075 aa5.02□□□□□ -1.61
CCDC30-203ENST00000428554 SETQ01105 290 aaPredicted RBP5.01□□□□□ -1.61
CCDC30-203ENST00000428554 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.01□□□□□ -1.61
CCDC30-203ENST00000428554 DDX11L8A8MPP1 907 aa5.01□□□□□ -1.61
CCDC30-203ENST00000428554 CD46P15529 392 aa5.01□□□□□ -1.61
CCDC30-203ENST00000428554 TEX2Q8IWB9 1127 aa5.01□□□□□ -1.61
CCDC30-203ENST00000428554 LIMD1Q9UGP4 676 aa5.01□□□□□ -1.61
CCDC30-203ENST00000428554 ATP1B4Q9UN42 357 aaPredicted RBP5.01□□□□□ -1.61
CCDC30-203ENST00000428554 ACIN1Q9UKV3 1341 aaKnown RBP5.01□□□□□ -1.61
CCDC30-203ENST00000428554 NBPF26B4DH59 902 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 SPIRE2Q8WWL2 714 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 KCNH8Q96L42 1107 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 TMEM134Q9H6X4 195 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 RIPOR2Q9Y4F9 1068 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 LOC102724159A0A0B4J2E5 919 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 DNAJB2P25686 324 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 PWP2Q15269 919 aaKnown RBP5□□□□□ -1.61
CCDC30-203ENST00000428554 PACS2Q86VP3 889 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 ZBED2Q9BTP6 218 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 KIAA1468Q9P260 1216 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 AXIN2Q9Y2T1 843 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 ARHGAP33O14559 1287 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 MAFGO15525 162 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 KDM4AO75164 1064 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 CLK2P49760 499 aaKnown RBP5□□□□□ -1.61
CCDC30-203ENST00000428554 EXOC8Q8IYI6 725 aa5□□□□□ -1.61
CCDC30-203ENST00000428554 SMARCA5O60264 1052 aaPredicted RBP4.99□□□□□ -1.61
CCDC30-203ENST00000428554 SREK1Q8WXA9 508 aaKnown RBP4.99□□□□□ -1.61
CCDC30-203ENST00000428554 DMRTA1Q5VZB9 504 aa4.99□□□□□ -1.61
CCDC30-203ENST00000428554 KRTAP3-3Q9BYR6 98 aa4.99□□□□□ -1.61
CCDC30-203ENST00000428554 KRTAP3-2Q9BYR7 98 aa4.99□□□□□ -1.61
CCDC30-203ENST00000428554 KIAA1522Q9P206 1035 aaPredicted RBP4.99□□□□□ -1.61
CCDC30-203ENST00000428554 TCF3P15923 654 aa4.98□□□□□ -1.61
CCDC30-203ENST00000428554 PKNOX2Q96KN3 472 aa4.98□□□□□ -1.61
CCDC30-203ENST00000428554 SEPT9Q9UHD8 586 aaPredicted RBP4.98□□□□□ -1.61
CCDC30-203ENST00000428554 MOXD2PA6NHM9 499 aa4.98□□□□□ -1.61
CCDC30-203ENST00000428554 NDUFV2P19404 249 aa4.98□□□□□ -1.61
CCDC30-203ENST00000428554 RIC3Q7Z5B4 369 aa4.98□□□□□ -1.61
CCDC30-203ENST00000428554 CSPP1Q1MSJ5 1256 aa4.97□□□□□ -1.61
CCDC30-203ENST00000428554 POM121Q96HA1 1249 aa4.97□□□□□ -1.61
CCDC30-203ENST00000428554 RFC5P40937 340 aa4.97□□□□□ -1.61
CCDC30-203ENST00000428554 LSM11P83369 360 aaKnown RBP eCLIP4.97□□□□□ -1.61
CCDC30-203ENST00000428554 IFFO2Q5TF58 517 aa4.97□□□□□ -1.61
CCDC30-203ENST00000428554 HIRIP3Q9BW71 556 aaPredicted RBP4.97□□□□□ -1.61
CCDC30-203ENST00000428554 PCDHB15Q9Y5E8 787 aa4.97□□□□□ -1.61
CCDC30-203ENST00000428554 QPCTQ16769 361 aa4.96□□□□□ -1.61
CCDC30-203ENST00000428554 RSBN1LQ6PCB5 846 aaPredicted RBP4.96□□□□□ -1.61
CCDC30-203ENST00000428554 TXNDC2Q86VQ3 553 aa4.96□□□□□ -1.61
CCDC30-203ENST00000428554 SULF1Q8IWU6 871 aa4.96□□□□□ -1.61
CCDC30-203ENST00000428554 RDH13Q8NBN7 331 aa4.96□□□□□ -1.61
CCDC30-203ENST00000428554 SNRKQ9NRH2 765 aa4.96□□□□□ -1.61
CCDC30-203ENST00000428554 SLC10A3P09131 477 aa4.96□□□□□ -1.62
CCDC30-203ENST00000428554 ERCC3P19447 782 aa4.96□□□□□ -1.62
CCDC30-203ENST00000428554 SWT1Q5T5J6 900 aaKnown RBP4.96□□□□□ -1.62
CCDC30-203ENST00000428554 NUTM1Q86Y26 1132 aa4.96□□□□□ -1.62
CCDC30-203ENST00000428554 SPTLC1O15269 473 aa4.95□□□□□ -1.62
CCDC30-203ENST00000428554 UBXN4Q92575 508 aa4.95□□□□□ -1.62
CCDC30-203ENST00000428554 HLA-CQ95604 372 aa4.95□□□□□ -1.62
CCDC30-203ENST00000428554 SIRT1Q96EB6 747 aa4.95□□□□□ -1.62
CCDC30-203ENST00000428554 MCCD1P59942 119 aaPredicted RBP4.95□□□□□ -1.62
CCDC30-203ENST00000428554 DIXDC1Q155Q3 683 aa4.95□□□□□ -1.62
CCDC30-203ENST00000428554 ANKRD13DQ6ZTN6 518 aa4.95□□□□□ -1.62
CCDC30-203ENST00000428554 RABGEF1Q9UJ41 708 aa4.95□□□□□ -1.62
CCDC30-203ENST00000428554 TK2O00142 265 aa4.94□□□□□ -1.62
CCDC30-203ENST00000428554 GUCA2AQ02747 115 aa4.94□□□□□ -1.62
CCDC30-203ENST00000428554 NOL8Q76FK4 1167 aaKnown RBP4.94□□□□□ -1.62
CCDC30-203ENST00000428554 SLC4A5Q9BY07 1137 aa4.94□□□□□ -1.62
CCDC30-203ENST00000428554 GNEQ9Y223 722 aaKnown RBP4.94□□□□□ -1.62
CCDC30-203ENST00000428554 IVNS1ABPQ9Y6Y0 642 aa4.94□□□□□ -1.62
CCDC30-203ENST00000428554 ANKRD62A6NC57 917 aa4.94□□□□□ -1.62
CCDC30-203ENST00000428554 MARCH6O60337 910 aa4.94□□□□□ -1.62
CCDC30-203ENST00000428554 HSP90AB4PQ58FF6 505 aa4.94□□□□□ -1.62
CCDC30-203ENST00000428554 RTL5Q5HYW3 569 aaPredicted RBP4.94□□□□□ -1.62
CCDC30-203ENST00000428554 PPP2R2DQ66LE6 453 aa4.94□□□□□ -1.62
CCDC30-203ENST00000428554 CABLES1Q8TDN4 633 aa4.94□□□□□ -1.62
CCDC30-203ENST00000428554 VPS9D1Q9Y2B5 631 aa4.94□□□□□ -1.62
CCDC30-203ENST00000428554 GCGRP47871 477 aa4.93□□□□□ -1.62
CCDC30-203ENST00000428554 MRRFQ96E11 262 aaKnown RBP4.93□□□□□ -1.62
CCDC30-203ENST00000428554 COG6Q9Y2V7 657 aa4.93□□□□□ -1.62
CCDC30-203ENST00000428554 VAMP1P23763 118 aa4.93□□□□□ -1.62
CCDC30-203ENST00000428554 SUGT1Q9Y2Z0 365 aa4.93□□□□□ -1.62
CCDC30-203ENST00000428554 LILRB3O75022 631 aa4.93□□□□□ -1.62
CCDC30-203ENST00000428554 ADGRD1Q6QNK2 874 aa4.93□□□□□ -1.62
CCDC30-203ENST00000428554 PCDHGC3Q9UN70 934 aa4.93□□□□□ -1.62
CCDC30-203ENST00000428554 PPME1Q9Y570 386 aa4.93□□□□□ -1.62
CCDC30-203ENST00000428554 HOXA2O43364 376 aa4.92□□□□□ -1.62
CCDC30-203ENST00000428554 TUSC1Q2TAM9 212 aa4.92□□□□□ -1.62
CCDC30-203ENST00000428554 PBXIP1Q96AQ6 731 aa4.92□□□□□ -1.62
CCDC30-203ENST00000428554 MYH16Q9H6N6 1097 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms