RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 ANO2Q9NQ90 1003 aa12.13□□□□□ -0.47
CLTCL1-202ENST00000427926 HMOX1P09601 288 aa12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 RALYLQ86SE5 291 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 TBC1D2BQ9UPU7 963 aa12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 ROCK1Q13464 1354 aa12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 FOXD4L5Q5VV16 416 aaPredicted RBP12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 FOXD4L4Q8WXT5 416 aaPredicted RBP12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 MYBBP1AQ9BQG0 1328 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 DEKP35659 375 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 GOLGA6L1Q8N7Z2 621 aa12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 CUX1P39880 1505 aa12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 CABP4P57796 275 aa12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 GNL3LQ9NVN8 582 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-202ENST00000427926 ANKRD20A12PQ8NF67 263 aa12.11□□□□□ -0.47
CLTCL1-202ENST00000427926 ATP6V1DQ9Y5K8 247 aa12.11□□□□□ -0.47
CLTCL1-202ENST00000427926 E9PSI1 815 aa12.11□□□□□ -0.47
CLTCL1-202ENST00000427926 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
CLTCL1-202ENST00000427926 SAFBQ15424 915 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLTCL1-202ENST00000427926 SLC3A2P08195 630 aaKnown RBP12.11□□□□□ -0.47
CLTCL1-202ENST00000427926 PHF14O94880 888 aa12.1□□□□□ -0.47
CLTCL1-202ENST00000427926 GNAI1P63096 354 aa12.1□□□□□ -0.47
CLTCL1-202ENST00000427926 ERC2O15083 957 aa12.1□□□□□ -0.47
CLTCL1-202ENST00000427926 CT47A1Q5JQC4 288 aaPredicted RBP12.1□□□□□ -0.47
CLTCL1-202ENST00000427926 GZF1Q9H116 711 aaPredicted RBP12.1□□□□□ -0.47
CLTCL1-202ENST00000427926 BRMS1Q9HCU9 246 aa12.1□□□□□ -0.47
CLTCL1-202ENST00000427926 GGNBP2Q9H3C7 697 aa12.09□□□□□ -0.47
CLTCL1-202ENST00000427926 MYOM3Q5VTT5 1437 aa12.09□□□□□ -0.47
CLTCL1-202ENST00000427926 ODF2Q5BJF6 829 aa12.09□□□□□ -0.47
CLTCL1-202ENST00000427926 TMEM132EQ6IEE7 984 aa12.09□□□□□ -0.47
CLTCL1-202ENST00000427926 GAS2L2Q8NHY3 880 aa12.09□□□□□ -0.47
CLTCL1-202ENST00000427926 CNNM1Q9NRU3 951 aa12.09□□□□□ -0.47
CLTCL1-202ENST00000427926 IPO7O95373 1038 aaKnown RBP12.09□□□□□ -0.47
CLTCL1-202ENST00000427926 ATP2B2Q01814 1243 aa12.09□□□□□ -0.47
CLTCL1-202ENST00000427926 HOOK1Q9UJC3 728 aaKnown RBP12.09□□□□□ -0.47
CLTCL1-202ENST00000427926 SPG7Q9UQ90 795 aa12.09□□□□□ -0.47
CLTCL1-202ENST00000427926 AFAP1Q8N556 730 aa12.09□□□□□ -0.47
CLTCL1-202ENST00000427926 STAC3Q96MF2 364 aa12.08□□□□□ -0.48
CLTCL1-202ENST00000427926 ARHGAP5Q13017 1502 aa12.08□□□□□ -0.48
CLTCL1-202ENST00000427926 BECN2A8MW95 431 aa12.07□□□□□ -0.48
CLTCL1-202ENST00000427926 XBP1P17861 261 aa12.07□□□□□ -0.48
CLTCL1-202ENST00000427926 DMRT2Q9Y5R5 561 aa12.07□□□□□ -0.48
CLTCL1-202ENST00000427926 ERICH3Q5RHP9 1530 aa12.07□□□□□ -0.48
CLTCL1-202ENST00000427926 GOLGA6L19H0YKK7 550 aa12.07□□□□□ -0.48
CLTCL1-202ENST00000427926 SART3Q15020 963 aaKnown RBP12.07□□□□□ -0.48
CLTCL1-202ENST00000427926 KIF21BO75037 1637 aa12.07□□□□□ -0.48
CLTCL1-202ENST00000427926 TOPBP1Q92547 1522 aa12.07□□□□□ -0.48
CLTCL1-202ENST00000427926 UBTFL1P0CB47 393 aaPredicted RBP12.06□□□□□ -0.48
CLTCL1-202ENST00000427926 PRDM2Q13029 1718 aa12.06□□□□□ -0.48
CLTCL1-202ENST00000427926 ZNF644Q9H582 1327 aaPredicted RBP12.06□□□□□ -0.48
CLTCL1-202ENST00000427926 FGD6Q6ZV73 1430 aa12.06□□□□□ -0.48
CLTCL1-202ENST00000427926 DNMBPQ6XZF7 1577 aa12.06□□□□□ -0.48
CLTCL1-202ENST00000427926 REC8O95072 547 aa12.06□□□□□ -0.48
CLTCL1-202ENST00000427926 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
CLTCL1-202ENST00000427926 PRG4Q92954 1404 aaPredicted RBP12.05□□□□□ -0.48
CLTCL1-202ENST00000427926 DDX19BQ9UMR2 479 aa12.05□□□□□ -0.48
CLTCL1-202ENST00000427926 NGLY1Q96IV0 654 aa12.05□□□□□ -0.48
CLTCL1-202ENST00000427926 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.05□□□□□ -0.48
CLTCL1-202ENST00000427926 APAF1O14727 1248 aa12.05□□□□□ -0.48
CLTCL1-202ENST00000427926 BICDL1Q6ZP65 573 aa12.05□□□□□ -0.48
CLTCL1-202ENST00000427926 SLC26A8Q96RN1 970 aa12.05□□□□□ -0.48
CLTCL1-202ENST00000427926 RSPH6AQ9H0K4 717 aa12.05□□□□□ -0.48
CLTCL1-202ENST00000427926 TMOD2Q9NZR1 351 aa12.05□□□□□ -0.48
CLTCL1-202ENST00000427926 ADAMTS2O95450 1211 aa12.04□□□□□ -0.48
CLTCL1-202ENST00000427926 UNC13AQ9UPW8 1703 aa12.04□□□□□ -0.48
CLTCL1-202ENST00000427926 CCDC70Q6NSX1 233 aa12.04□□□□□ -0.48
CLTCL1-202ENST00000427926 EPS15P42566 896 aa12.04□□□□□ -0.48
CLTCL1-202ENST00000427926 ZFYVE27Q5T4F4 411 aa12.04□□□□□ -0.48
CLTCL1-202ENST00000427926 USP47Q96K76 1375 aa12.04□□□□□ -0.48
CLTCL1-202ENST00000427926 CASKIN1Q8WXD9 1431 aa12.04□□□□□ -0.48
CLTCL1-202ENST00000427926 MPHOSPH10O00566 681 aaKnown RBP12.03□□□□□ -0.48
CLTCL1-202ENST00000427926 FOXD4L6Q3SYB3 417 aaPredicted RBP12.03□□□□□ -0.48
CLTCL1-202ENST00000427926 CCDC30Q5VVM6 783 aa12.03□□□□□ -0.48
CLTCL1-202ENST00000427926 FOXD4L3Q6VB84 417 aaPredicted RBP12.03□□□□□ -0.48
CLTCL1-202ENST00000427926 MPHOSPH8Q99549 860 aa12.03□□□□□ -0.48
CLTCL1-202ENST00000427926 SYNJ1O43426 1573 aa12.03□□□□□ -0.48
CLTCL1-202ENST00000427926 TTLL12Q14166 644 aaPredicted RBP12.03□□□□□ -0.48
CLTCL1-202ENST00000427926 PRAM1Q96QH2 718 aa12.03□□□□□ -0.48
CLTCL1-202ENST00000427926 XPCQ01831 940 aaPredicted RBP12.03□□□□□ -0.48
CLTCL1-202ENST00000427926 RUNDC1Q96C34 613 aa12.03□□□□□ -0.48
CLTCL1-202ENST00000427926 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
CLTCL1-202ENST00000427926 SYNJ2O15056 1496 aa12.02□□□□□ -0.49
CLTCL1-202ENST00000427926 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.49
CLTCL1-202ENST00000427926 FYCO1Q9BQS8 1478 aa12.02□□□□□ -0.49
CLTCL1-202ENST00000427926 TTC39AQ5SRH9 613 aa12.02□□□□□ -0.49
CLTCL1-202ENST00000427926 ZNF530Q6P9A1 599 aaPredicted RBP12.02□□□□□ -0.49
CLTCL1-202ENST00000427926 PEG3Q9GZU2 1588 aa12.02□□□□□ -0.49
CLTCL1-202ENST00000427926 CCDC158Q5M9N0 1113 aa12.01□□□□□ -0.49
CLTCL1-202ENST00000427926 DNAJC2Q99543 621 aaKnown RBP12.01□□□□□ -0.49
CLTCL1-202ENST00000427926 DZIP1LQ8IYY4 767 aaKnown RBP12.01□□□□□ -0.49
CLTCL1-202ENST00000427926 COG6Q9Y2V7 657 aa12.01□□□□□ -0.49
CLTCL1-202ENST00000427926 MTHFSP49914 203 aa12.01□□□□□ -0.49
CLTCL1-202ENST00000427926 FOSBP53539 338 aa12.01□□□□□ -0.49
CLTCL1-202ENST00000427926 FSD1Q9BTV5 496 aa12.01□□□□□ -0.49
CLTCL1-202ENST00000427926 ZPR1O75312 459 aa12□□□□□ -0.49
CLTCL1-202ENST00000427926 RAPGEF3O95398 923 aa12□□□□□ -0.49
CLTCL1-202ENST00000427926 RRP12Q5JTH9 1297 aaKnown RBP12□□□□□ -0.49
CLTCL1-202ENST00000427926 CDK5RAP3Q96JB5 506 aa12□□□□□ -0.49
CLTCL1-202ENST00000427926 CCAR2Q8N163 923 aaKnown RBP12□□□□□ -0.49
CLTCL1-202ENST00000427926 NCOA2Q15596 1464 aa12□□□□□ -0.49
CLTCL1-202ENST00000427926 IBSPP21815 317 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms