RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 NSD2O96028 1365 aa11.56□□□□□ -0.56
SH3D19-204ENST00000427414 ATAD2Q6PL18 1390 aa11.56□□□□□ -0.56
SH3D19-204ENST00000427414 TULP4Q9NRJ4 1543 aa11.56□□□□□ -0.56
SH3D19-204ENST00000427414 MLECQ14165 292 aa11.55□□□□□ -0.56
SH3D19-204ENST00000427414 THEMISQ8N1K5 641 aaPredicted RBP11.55□□□□□ -0.56
SH3D19-204ENST00000427414 MSH5O43196 834 aa11.54□□□□□ -0.56
SH3D19-204ENST00000427414 ADAMTS13Q76LX8 1427 aa11.53□□□□□ -0.56
SH3D19-204ENST00000427414 NLRP13Q86W25 1043 aa11.53□□□□□ -0.56
SH3D19-204ENST00000427414 PANK3Q9H999 370 aa11.53□□□□□ -0.56
SH3D19-204ENST00000427414 TBX22Q9Y458 520 aa11.52□□□□□ -0.57
SH3D19-204ENST00000427414 EID1Q9Y6B2 187 aa11.52□□□□□ -0.57
SH3D19-204ENST00000427414 PTCH1Q13635 1447 aa11.52□□□□□ -0.57
SH3D19-204ENST00000427414 ANKRD36BQ8N2N9 1353 aa11.51□□□□□ -0.57
SH3D19-204ENST00000427414 ANKRD26Q9UPS8 1709 aa11.51□□□□□ -0.57
SH3D19-204ENST00000427414 ERICH6Q7L0X2 663 aa11.51□□□□□ -0.57
SH3D19-204ENST00000427414 ATP7BP35670 1465 aa11.51□□□□□ -0.57
SH3D19-204ENST00000427414 TRAK1Q9UPV9 953 aa11.51□□□□□ -0.57
SH3D19-204ENST00000427414 KNSTRNQ9Y448 316 aa11.51□□□□□ -0.57
SH3D19-204ENST00000427414 XRN1Q8IZH2 1706 aaKnown RBP11.5□□□□□ -0.57
SH3D19-204ENST00000427414 AMER1Q5JTC6 1135 aaPredicted RBP11.5□□□□□ -0.57
SH3D19-204ENST00000427414 TMEM132EQ6IEE7 984 aa11.48□□□□□ -0.57
SH3D19-204ENST00000427414 DAXXQ9UER7 740 aaPredicted RBP11.48□□□□□ -0.57
SH3D19-204ENST00000427414 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
SH3D19-204ENST00000427414 FANCIQ9NVI1 1328 aa11.47□□□□□ -0.57
SH3D19-204ENST00000427414 CGNL1Q0VF96 1302 aa11.47□□□□□ -0.57
SH3D19-204ENST00000427414 PNISRQ8TF01 805 aaKnown RBP11.46□□□□□ -0.57
SH3D19-204ENST00000427414 PHF23Q9BUL5 403 aaPredicted RBP11.46□□□□□ -0.57
SH3D19-204ENST00000427414 TOPAZ1Q8N9V7 1692 aa11.46□□□□□ -0.58
SH3D19-204ENST00000427414 ZBED9Q6R2W3 1325 aa11.46□□□□□ -0.58
SH3D19-204ENST00000427414 CDC42BPGQ6DT37 1551 aa11.46□□□□□ -0.58
SH3D19-204ENST00000427414 POLR3GLQ9BT43 218 aa11.45□□□□□ -0.58
SH3D19-204ENST00000427414 METP08581 1390 aa11.45□□□□□ -0.58
SH3D19-204ENST00000427414 ITSN1Q15811 1721 aa11.45□□□□□ -0.58
SH3D19-204ENST00000427414 TXNDC2Q86VQ3 553 aa11.45□□□□□ -0.58
SH3D19-204ENST00000427414 NGEFQ8N5V2 710 aa11.45□□□□□ -0.58
SH3D19-204ENST00000427414 POGKQ9P215 609 aa11.45□□□□□ -0.58
SH3D19-204ENST00000427414 AKAP12Q02952 1782 aa11.45□□□□□ -0.58
SH3D19-204ENST00000427414 TMC1Q8TDI8 760 aa11.44□□□□□ -0.58
SH3D19-204ENST00000427414 PRAM1Q96QH2 718 aa11.44□□□□□ -0.58
SH3D19-204ENST00000427414 CHD2O14647 1828 aaKnown RBP11.44□□□□□ -0.58
SH3D19-204ENST00000427414 TERF2IPQ9NYB0 399 aa11.44□□□□□ -0.58
SH3D19-204ENST00000427414 MON2Q7Z3U7 1717 aa11.44□□□□□ -0.58
SH3D19-204ENST00000427414 KIF20BQ96Q89 1820 aa11.43□□□□□ -0.58
SH3D19-204ENST00000427414 IRX6P78412 446 aaPredicted RBP11.43□□□□□ -0.58
SH3D19-204ENST00000427414 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
SH3D19-204ENST00000427414 BLMP54132 1417 aaPredicted RBP11.43□□□□□ -0.58
SH3D19-204ENST00000427414 POLR3AO14802 1390 aaPredicted RBP11.43□□□□□ -0.58
SH3D19-204ENST00000427414 NWD1Q149M9 1564 aa11.43□□□□□ -0.58
SH3D19-204ENST00000427414 CD163L1Q9NR16 1453 aa11.42□□□□□ -0.58
SH3D19-204ENST00000427414 LTKP29376 864 aa11.42□□□□□ -0.58
SH3D19-204ENST00000427414 CPSF1Q10570 1443 aaKnown RBP11.42□□□□□ -0.58
SH3D19-204ENST00000427414 ANKARQ7Z5J8 1434 aa11.41□□□□□ -0.58
SH3D19-204ENST00000427414 NSD3Q9BZ95 1437 aa11.41□□□□□ -0.58
SH3D19-204ENST00000427414 NUTM2DQ5VT03 806 aaPredicted RBP11.41□□□□□ -0.58
SH3D19-204ENST00000427414 WASLO00401 505 aaPredicted RBP11.41□□□□□ -0.58
SH3D19-204ENST00000427414 CEBPAP49715 358 aaPredicted RBP11.41□□□□□ -0.58
SH3D19-204ENST00000427414 HNRNPUQ00839 825 aaKnown RBP eCLIP11.41□□□□□ -0.58
SH3D19-204ENST00000427414 ANKLE2Q86XL3 938 aa11.41□□□□□ -0.58
SH3D19-204ENST00000427414 CARD14Q9BXL6 1004 aa11.41□□□□□ -0.58
SH3D19-204ENST00000427414 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.4□□□□□ -0.58
SH3D19-204ENST00000427414 PPP2R1AP30153 589 aa11.4□□□□□ -0.58
SH3D19-204ENST00000427414 LRRC7Q96NW7 1537 aa11.4□□□□□ -0.58
SH3D19-204ENST00000427414 HDGFL2Q7Z4V5 671 aaPredicted RBP11.4□□□□□ -0.59
SH3D19-204ENST00000427414 EDC4Q6P2E9 1401 aaKnown RBP11.4□□□□□ -0.59
SH3D19-204ENST00000427414 USP54Q70EL1 1684 aa11.39□□□□□ -0.59
SH3D19-204ENST00000427414 PDE3BQ13370 1112 aa11.39□□□□□ -0.59
SH3D19-204ENST00000427414 ZNF692Q9BU19 519 aaPredicted RBP11.39□□□□□ -0.59
SH3D19-204ENST00000427414 CDK19Q9BWU1 502 aa11.39□□□□□ -0.59
SH3D19-204ENST00000427414 PTPRUQ92729 1446 aa11.39□□□□□ -0.59
SH3D19-204ENST00000427414 NCOA3Q9Y6Q9 1424 aa11.38□□□□□ -0.59
SH3D19-204ENST00000427414 CCDC184Q52MB2 194 aa11.38□□□□□ -0.59
SH3D19-204ENST00000427414 NRKQ7Z2Y5 1582 aa11.38□□□□□ -0.59
SH3D19-204ENST00000427414 STK26Q9P289 416 aa11.38□□□□□ -0.59
SH3D19-204ENST00000427414 A0A1W2PP64 1363 aa11.38□□□□□ -0.59
SH3D19-204ENST00000427414 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
SH3D19-204ENST00000427414 SRPK2P78362 688 aaKnown RBP11.37□□□□□ -0.59
SH3D19-204ENST00000427414 FMN2Q9NZ56 1722 aa11.37□□□□□ -0.59
SH3D19-204ENST00000427414 SLC12A5Q9H2X9 1139 aa11.37□□□□□ -0.59
SH3D19-204ENST00000427414 PLEKHG3A1L390 1219 aa11.36□□□□□ -0.59
SH3D19-204ENST00000427414 CCDC61Q9Y6R9 512 aa11.36□□□□□ -0.59
SH3D19-204ENST00000427414 NPHP4O75161 1426 aaPredicted RBP11.36□□□□□ -0.59
SH3D19-204ENST00000427414 SMG6Q86US8 1419 aaKnown RBP11.36□□□□□ -0.59
SH3D19-204ENST00000427414 PLEKHH1Q9ULM0 1364 aa11.36□□□□□ -0.59
SH3D19-204ENST00000427414 ERICH6BQ5W0A0 696 aa11.36□□□□□ -0.59
SH3D19-204ENST00000427414 NKTRP30414 1462 aaKnown RBP11.35□□□□□ -0.59
SH3D19-204ENST00000427414 CC2D1BQ5T0F9 858 aaKnown RBP11.35□□□□□ -0.59
SH3D19-204ENST00000427414 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
SH3D19-204ENST00000427414 CABP2Q9NPB3 220 aa11.35□□□□□ -0.59
SH3D19-204ENST00000427414 AATKQ6ZMQ8 1374 aa11.35□□□□□ -0.59
SH3D19-204ENST00000427414 SHPRHQ149N8 1683 aa11.35□□□□□ -0.59
SH3D19-204ENST00000427414 DEKP35659 375 aaKnown RBP11.34□□□□□ -0.59
SH3D19-204ENST00000427414 PPIP5K1Q6PFW1 1433 aa11.34□□□□□ -0.59
SH3D19-204ENST00000427414 FAM9BQ8IZU0 186 aa11.33□□□□□ -0.59
SH3D19-204ENST00000427414 AMOTL2Q9Y2J4 779 aa11.33□□□□□ -0.59
SH3D19-204ENST00000427414 MORC1Q86VD1 984 aa11.33□□□□□ -0.6
SH3D19-204ENST00000427414 PPP4R2Q9NY27 417 aa11.33□□□□□ -0.6
SH3D19-204ENST00000427414 NALCNQ8IZF0 1738 aa11.33□□□□□ -0.6
SH3D19-204ENST00000427414 WAPLQ7Z5K2 1190 aa11.32□□□□□ -0.6
SH3D19-204ENST00000427414 NUDT16Q96DE0 195 aaKnown RBP11.32□□□□□ -0.6
SH3D19-204ENST00000427414 CFAP53Q96M91 514 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms