RNA–Protein interactions for RNA: ENST00000425654.6

CNKSR2-203, Transcript of connector enhancer of kinase suppressor of Ras 2, humanhuman

TSL 1 (best) BASIC

Gene CNKSR2, Length 5,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR2-203ENST00000425654 CCAR2Q8N163 923 aaKnown RBP17.38■□□□□ 0.37
CNKSR2-203ENST00000425654 UBTFL1P0CB47 393 aaPredicted RBP17.37■□□□□ 0.37
CNKSR2-203ENST00000425654 MTHFSP49914 203 aa17.37■□□□□ 0.37
CNKSR2-203ENST00000425654 CCDC70Q6NSX1 233 aa17.37■□□□□ 0.37
CNKSR2-203ENST00000425654 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
CNKSR2-203ENST00000425654 RAD21O60216 631 aa17.36■□□□□ 0.37
CNKSR2-203ENST00000425654 ATF3P18847 181 aa17.36■□□□□ 0.37
CNKSR2-203ENST00000425654 IPO7O95373 1038 aaKnown RBP17.35■□□□□ 0.37
CNKSR2-203ENST00000425654 TCEAL9Q9UHQ7 104 aa17.35■□□□□ 0.37
CNKSR2-203ENST00000425654 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
CNKSR2-203ENST00000425654 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
CNKSR2-203ENST00000425654 NINLQ9Y2I6 1382 aa17.35■□□□□ 0.37
CNKSR2-203ENST00000425654 DHX16O60231 1041 aaKnown RBP17.34■□□□□ 0.37
CNKSR2-203ENST00000425654 PCMTD1Q96MG8 357 aaPredicted RBP17.34■□□□□ 0.37
CNKSR2-203ENST00000425654 TCP11L2Q8N4U5 519 aa17.34■□□□□ 0.37
CNKSR2-203ENST00000425654 PRM3Q9NNZ6 103 aa17.34■□□□□ 0.37
CNKSR2-203ENST00000425654 SYNJ2O15056 1496 aa17.34■□□□□ 0.37
CNKSR2-203ENST00000425654 CTDP1Q9Y5B0 961 aaPredicted RBP17.34■□□□□ 0.37
CNKSR2-203ENST00000425654 PPP2R1AP30153 589 aa17.34■□□□□ 0.37
CNKSR2-203ENST00000425654 NLRP6P59044 892 aa17.34■□□□□ 0.37
CNKSR2-203ENST00000425654 GPS2Q13227 327 aa17.34■□□□□ 0.37
CNKSR2-203ENST00000425654 AIMP1Q12904 312 aaKnown RBP17.33■□□□□ 0.37
CNKSR2-203ENST00000425654 SASS6Q6UVJ0 657 aa17.33■□□□□ 0.37
CNKSR2-203ENST00000425654 NLRP2Q9NX02 1062 aa17.33■□□□□ 0.37
CNKSR2-203ENST00000425654 ZNF592Q92610 1267 aa17.33■□□□□ 0.36
CNKSR2-203ENST00000425654 NEUROD6Q96NK8 337 aa17.33■□□□□ 0.36
CNKSR2-203ENST00000425654 SCAPERQ9BY12 1400 aa17.33■□□□□ 0.36
CNKSR2-203ENST00000425654 CFAP70Q5T0N1 1121 aa17.33■□□□□ 0.36
CNKSR2-203ENST00000425654 SAFBQ15424 915 aaKnown RBP eCLIP17.33■□□□□ 0.36
CNKSR2-203ENST00000425654 RALYLQ86SE5 291 aaKnown RBP17.32■□□□□ 0.36
CNKSR2-203ENST00000425654 HFM1A2PYH4 1435 aa17.32■□□□□ 0.36
CNKSR2-203ENST00000425654 GAS2L2Q8NHY3 880 aa17.32■□□□□ 0.36
CNKSR2-203ENST00000425654 GNAI3P08754 354 aa17.32■□□□□ 0.36
CNKSR2-203ENST00000425654 CCDC30Q5VVM6 783 aa17.32■□□□□ 0.36
CNKSR2-203ENST00000425654 CCDC73Q6ZRK6 1079 aa17.32■□□□□ 0.36
CNKSR2-203ENST00000425654 CNTROBQ8N137 903 aa17.31■□□□□ 0.36
CNKSR2-203ENST00000425654 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
CNKSR2-203ENST00000425654 AFAP1Q8N556 730 aa17.3■□□□□ 0.36
CNKSR2-203ENST00000425654 WASHC4Q2M389 1173 aa17.3■□□□□ 0.36
CNKSR2-203ENST00000425654 PSMA5P28066 241 aa17.3■□□□□ 0.36
CNKSR2-203ENST00000425654 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
CNKSR2-203ENST00000425654 CFTRP13569 1480 aa17.29■□□□□ 0.36
CNKSR2-203ENST00000425654 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.29■□□□□ 0.36
CNKSR2-203ENST00000425654 GPRASP1Q5JY77 1395 aa17.29■□□□□ 0.36
CNKSR2-203ENST00000425654 ARAP1Q96P48 1450 aa17.29■□□□□ 0.36
CNKSR2-203ENST00000425654 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
CNKSR2-203ENST00000425654 HOMER1Q86YM7 354 aa17.28■□□□□ 0.36
CNKSR2-203ENST00000425654 CLASRPQ8N2M8 674 aaKnown RBP17.28■□□□□ 0.36
CNKSR2-203ENST00000425654 RBM33Q96EV2 1170 aaKnown RBP17.28■□□□□ 0.36
CNKSR2-203ENST00000425654 EHBP1L1Q8N3D4 1523 aa17.28■□□□□ 0.36
CNKSR2-203ENST00000425654 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
CNKSR2-203ENST00000425654 CDCA7LQ96GN5 454 aa17.28■□□□□ 0.36
CNKSR2-203ENST00000425654 MEX3CQ5U5Q3 659 aaKnown RBP17.27■□□□□ 0.36
CNKSR2-203ENST00000425654 FOSBP53539 338 aa17.27■□□□□ 0.35
CNKSR2-203ENST00000425654 FSD1Q9BTV5 496 aa17.27■□□□□ 0.35
CNKSR2-203ENST00000425654 EXOSC9Q06265 439 aaKnown RBP17.27■□□□□ 0.35
CNKSR2-203ENST00000425654 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.35
CNKSR2-203ENST00000425654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.26■□□□□ 0.35
CNKSR2-203ENST00000425654 NFKBIBQ15653 356 aa17.26■□□□□ 0.35
CNKSR2-203ENST00000425654 ABTB2Q8N961 1025 aa17.26■□□□□ 0.35
CNKSR2-203ENST00000425654 PLEKHH2Q8IVE3 1493 aa17.26■□□□□ 0.35
CNKSR2-203ENST00000425654 SURF6O75683 361 aaKnown RBP17.25■□□□□ 0.35
CNKSR2-203ENST00000425654 PLEKHO1Q53GL0 409 aaPredicted RBP17.25■□□□□ 0.35
CNKSR2-203ENST00000425654 C9orf84Q5VXU9 1444 aa17.25■□□□□ 0.35
CNKSR2-203ENST00000425654 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
CNKSR2-203ENST00000425654 PDE3AQ14432 1141 aa17.25■□□□□ 0.35
CNKSR2-203ENST00000425654 PRAM1Q96QH2 718 aa17.25■□□□□ 0.35
CNKSR2-203ENST00000425654 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.25■□□□□ 0.35
CNKSR2-203ENST00000425654 PRG4Q92954 1404 aaPredicted RBP17.25■□□□□ 0.35
CNKSR2-203ENST00000425654 GCC1Q96CN9 775 aa17.24■□□□□ 0.35
CNKSR2-203ENST00000425654 BRMS1Q9HCU9 246 aa17.24■□□□□ 0.35
CNKSR2-203ENST00000425654 NBPF1Q3BBV0 1214 aa17.23■□□□□ 0.35
CNKSR2-203ENST00000425654 WWC1Q8IX03 1113 aa17.23■□□□□ 0.35
CNKSR2-203ENST00000425654 SMG6Q86US8 1419 aaKnown RBP17.23■□□□□ 0.35
CNKSR2-203ENST00000425654 HIP1O00291 1037 aa17.23■□□□□ 0.35
CNKSR2-203ENST00000425654 PDZRN3Q9UPQ7 1066 aa17.23■□□□□ 0.35
CNKSR2-203ENST00000425654 XBP1P17861 261 aa17.23■□□□□ 0.35
CNKSR2-203ENST00000425654 CCDC27Q2M243 656 aa17.23■□□□□ 0.35
CNKSR2-203ENST00000425654 NAT10Q9H0A0 1025 aaKnown RBP17.23■□□□□ 0.35
CNKSR2-203ENST00000425654 SETQ01105 290 aaPredicted RBP17.23■□□□□ 0.35
CNKSR2-203ENST00000425654 MCM2P49736 904 aa17.22■□□□□ 0.35
CNKSR2-203ENST00000425654 ERC1Q8IUD2 1116 aa17.22■□□□□ 0.35
CNKSR2-203ENST00000425654 TXNDC2Q86VQ3 553 aa17.22■□□□□ 0.35
CNKSR2-203ENST00000425654 CCDC43Q96MW1 224 aaKnown RBP17.22■□□□□ 0.35
CNKSR2-203ENST00000425654 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
CNKSR2-203ENST00000425654 GNAI2P04899 355 aa17.21■□□□□ 0.35
CNKSR2-203ENST00000425654 OLFM4Q6UX06 510 aa17.21■□□□□ 0.35
CNKSR2-203ENST00000425654 MRE11P49959 708 aa17.21■□□□□ 0.35
CNKSR2-203ENST00000425654 ANO8Q9HCE9 1232 aaPredicted RBP17.21■□□□□ 0.35
CNKSR2-203ENST00000425654 ESCO1Q5FWF5 840 aa17.21■□□□□ 0.34
CNKSR2-203ENST00000425654 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.34
CNKSR2-203ENST00000425654 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
CNKSR2-203ENST00000425654 FYB1O15117 783 aa17.2■□□□□ 0.34
CNKSR2-203ENST00000425654 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
CNKSR2-203ENST00000425654 IFT57Q9NWB7 429 aa17.2■□□□□ 0.34
CNKSR2-203ENST00000425654 LETM1O95202 739 aaPredicted RBP17.2■□□□□ 0.34
CNKSR2-203ENST00000425654 SART3Q15020 963 aaKnown RBP17.2■□□□□ 0.34
CNKSR2-203ENST00000425654 RABEP1Q15276 862 aa17.2■□□□□ 0.34
CNKSR2-203ENST00000425654 VSIG10Q8N0Z9 540 aa17.19■□□□□ 0.34
CNKSR2-203ENST00000425654 CT47B1P0C2W7 299 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms