RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
LMO3-206ENST00000424192 XIRP1Q702N8 1843 aaKnown RBP16.8■□□□□ 0.28
LMO3-206ENST00000424192 TIMELESSQ9UNS1 1208 aa16.8■□□□□ 0.28
LMO3-206ENST00000424192 FAM135BQ49AJ0 1406 aa16.79■□□□□ 0.28
LMO3-206ENST00000424192 CFAP70Q5T0N1 1121 aa16.78■□□□□ 0.28
LMO3-206ENST00000424192 ADGRL3Q9HAR2 1447 aa16.78■□□□□ 0.28
LMO3-206ENST00000424192 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
LMO3-206ENST00000424192 CAPN15O75808 1086 aa16.77■□□□□ 0.28
LMO3-206ENST00000424192 FBXO41Q8TF61 875 aa16.76■□□□□ 0.27
LMO3-206ENST00000424192 ROBO2Q9HCK4 1378 aa16.76■□□□□ 0.27
LMO3-206ENST00000424192 TOM1O60784 492 aa16.75■□□□□ 0.27
LMO3-206ENST00000424192 C14orf37Q86TY3 774 aa16.75■□□□□ 0.27
LMO3-206ENST00000424192 SIRT1Q96EB6 747 aa16.75■□□□□ 0.27
LMO3-206ENST00000424192 RALGAPBQ86X10 1494 aa16.74■□□□□ 0.27
LMO3-206ENST00000424192 NALCNQ8IZF0 1738 aa16.74■□□□□ 0.27
LMO3-206ENST00000424192 CDC42BPGQ6DT37 1551 aa16.74■□□□□ 0.27
LMO3-206ENST00000424192 TMEM132EQ6IEE7 984 aa16.73■□□□□ 0.27
LMO3-206ENST00000424192 UBAP1LF5GYI3 381 aa16.72■□□□□ 0.27
LMO3-206ENST00000424192 CADPS2Q86UW7 1296 aa16.72■□□□□ 0.27
LMO3-206ENST00000424192 C19orf44Q9H6X5 657 aa16.72■□□□□ 0.27
LMO3-206ENST00000424192 ARHGEF28Q8N1W1 1705 aaKnown RBP16.72■□□□□ 0.27
LMO3-206ENST00000424192 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.72■□□□□ 0.27
LMO3-206ENST00000424192 STK26Q9P289 416 aa16.71■□□□□ 0.27
LMO3-206ENST00000424192 ROCK2O75116 1388 aaKnown RBP16.71■□□□□ 0.27
LMO3-206ENST00000424192 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
LMO3-206ENST00000424192 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
LMO3-206ENST00000424192 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
LMO3-206ENST00000424192 ATF3P18847 181 aa16.69■□□□□ 0.26
LMO3-206ENST00000424192 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
LMO3-206ENST00000424192 POGKQ9P215 609 aa16.66■□□□□ 0.26
LMO3-206ENST00000424192 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
LMO3-206ENST00000424192 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
LMO3-206ENST00000424192 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
LMO3-206ENST00000424192 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.25
LMO3-206ENST00000424192 MST1RQ04912 1400 aa16.63■□□□□ 0.25
LMO3-206ENST00000424192 NBPF1Q3BBV0 1214 aa16.63■□□□□ 0.25
LMO3-206ENST00000424192 NBPF8Q3BBV2 869 aa16.63■□□□□ 0.25
LMO3-206ENST00000424192 FMN2Q9NZ56 1722 aa16.62■□□□□ 0.25
LMO3-206ENST00000424192 WAPLQ7Z5K2 1190 aa16.62■□□□□ 0.25
LMO3-206ENST00000424192 ROBO1Q9Y6N7 1651 aa16.62■□□□□ 0.25
LMO3-206ENST00000424192 CARD11Q9BXL7 1154 aa16.61■□□□□ 0.25
LMO3-206ENST00000424192 SLAIN2Q9P270 581 aa16.61■□□□□ 0.25
LMO3-206ENST00000424192 QRICH2Q9H0J4 1663 aa16.61■□□□□ 0.25
LMO3-206ENST00000424192 CENPJQ9HC77 1338 aaPredicted RBP16.61■□□□□ 0.25
LMO3-206ENST00000424192 ANKARQ7Z5J8 1434 aa16.61■□□□□ 0.25
LMO3-206ENST00000424192 PIP4K2BP78356 416 aa16.6■□□□□ 0.25
LMO3-206ENST00000424192 C1orf167Q5SNV9 1468 aa16.6■□□□□ 0.25
LMO3-206ENST00000424192 SBNO2Q9Y2G9 1366 aa16.59■□□□□ 0.25
LMO3-206ENST00000424192 TULP4Q9NRJ4 1543 aa16.59■□□□□ 0.25
LMO3-206ENST00000424192 KIF1AQ12756 1690 aa16.58■□□□□ 0.24
LMO3-206ENST00000424192 AHDC1Q5TGY3 1603 aaPredicted RBP16.57■□□□□ 0.24
LMO3-206ENST00000424192 DSG3P32926 999 aa16.56■□□□□ 0.24
LMO3-206ENST00000424192 SAFB2Q14151 953 aaKnown RBP eCLIP16.56■□□□□ 0.24
LMO3-206ENST00000424192 MINK1Q8N4C8 1332 aaPredicted RBP16.55■□□□□ 0.24
LMO3-206ENST00000424192 SLC24A1O60721 1099 aa16.55■□□□□ 0.24
LMO3-206ENST00000424192 ILDR1Q86SU0 546 aaPredicted RBP16.55■□□□□ 0.24
LMO3-206ENST00000424192 ITSN1Q15811 1721 aa16.55■□□□□ 0.24
LMO3-206ENST00000424192 NHSL1Q5SYE7 1610 aa16.55■□□□□ 0.24
LMO3-206ENST00000424192 BRINP3Q76B58 766 aa16.53■□□□□ 0.24
LMO3-206ENST00000424192 USP47Q96K76 1375 aa16.52■□□□□ 0.24
LMO3-206ENST00000424192 WASLO00401 505 aaPredicted RBP16.52■□□□□ 0.24
LMO3-206ENST00000424192 ABCB7O75027 752 aa16.52■□□□□ 0.24
LMO3-206ENST00000424192 PHLPP1O60346 1717 aa16.51■□□□□ 0.23
LMO3-206ENST00000424192 ATP7BP35670 1465 aa16.51■□□□□ 0.23
LMO3-206ENST00000424192 EVC2Q86UK5 1308 aa16.5■□□□□ 0.23
LMO3-206ENST00000424192 USP32Q8NFA0 1604 aa16.5■□□□□ 0.23
LMO3-206ENST00000424192 HIRIP3Q9BW71 556 aaPredicted RBP16.5■□□□□ 0.23
LMO3-206ENST00000424192 TOPAZ1Q8N9V7 1692 aa16.5■□□□□ 0.23
LMO3-206ENST00000424192 COL16A1Q07092 1604 aaPredicted RBP16.49■□□□□ 0.23
LMO3-206ENST00000424192 NPHP3Q7Z494 1330 aa16.48■□□□□ 0.23
LMO3-206ENST00000424192 ESCO1Q5FWF5 840 aa16.47■□□□□ 0.23
LMO3-206ENST00000424192 HSPA1LP34931 641 aa16.46■□□□□ 0.23
LMO3-206ENST00000424192 POLA2Q14181 598 aa16.46■□□□□ 0.23
LMO3-206ENST00000424192 ATAD2Q6PL18 1390 aa16.46■□□□□ 0.23
LMO3-206ENST00000424192 SRPK2P78362 688 aaKnown RBP16.45■□□□□ 0.22
LMO3-206ENST00000424192 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
LMO3-206ENST00000424192 NUTM2FA1L443 756 aa16.44■□□□□ 0.22
LMO3-206ENST00000424192 ORAI2Q96SN7 254 aa16.44■□□□□ 0.22
LMO3-206ENST00000424192 PHF8Q9UPP1 1060 aa16.44■□□□□ 0.22
LMO3-206ENST00000424192 SHPRHQ149N8 1683 aa16.43■□□□□ 0.22
LMO3-206ENST00000424192 PXDNQ92626 1479 aa16.43■□□□□ 0.22
LMO3-206ENST00000424192 JCADQ9P266 1359 aa16.43■□□□□ 0.22
LMO3-206ENST00000424192 NUDT16Q96DE0 195 aaKnown RBP16.43■□□□□ 0.22
LMO3-206ENST00000424192 PUS7Q96PZ0 661 aaKnown RBP16.43■□□□□ 0.22
LMO3-206ENST00000424192 RGPD8O14715 1765 aaPredicted RBP16.43■□□□□ 0.22
LMO3-206ENST00000424192 PRR36Q9H6K5 1346 aa16.43■□□□□ 0.22
LMO3-206ENST00000424192 ST20-MTHFSA0A0A6YYL1 179 aa16.42■□□□□ 0.22
LMO3-206ENST00000424192 EIF4G2P78344 907 aaKnown RBP eCLIP16.42■□□□□ 0.22
LMO3-206ENST00000424192 CCDC61Q9Y6R9 512 aa16.42■□□□□ 0.22
LMO3-206ENST00000424192 SOS2Q07890 1332 aaPredicted RBP16.42■□□□□ 0.22
LMO3-206ENST00000424192 NINLQ9Y2I6 1382 aa16.41■□□□□ 0.22
LMO3-206ENST00000424192 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
LMO3-206ENST00000424192 PPIP5K1Q6PFW1 1433 aa16.41■□□□□ 0.22
LMO3-206ENST00000424192 TMF1P82094 1093 aa16.4■□□□□ 0.22
LMO3-206ENST00000424192 LRRC59Q96AG4 307 aaKnown RBP16.4■□□□□ 0.22
LMO3-206ENST00000424192 TESK2Q96S53 571 aa16.4■□□□□ 0.22
LMO3-206ENST00000424192 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
LMO3-206ENST00000424192 BRD4O60885 1362 aaPredicted RBP16.39■□□□□ 0.21
LMO3-206ENST00000424192 PSME1Q06323 249 aa16.39■□□□□ 0.21
LMO3-206ENST00000424192 SBNO1A3KN83 1393 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms