RNA–Protein interactions for RNA: ENST00000423041.6

PAPD4-202, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAPD4, Length 3,223 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-202ENST00000423041 KDM2BQ8NHM5 1336 aa11.7□□□□□ -0.54
PAPD4-202ENST00000423041 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
PAPD4-202ENST00000423041 CCDC7Q96M83 1385 aa11.69□□□□□ -0.54
PAPD4-202ENST00000423041 SLC4A1APQ9BWU0 796 aaKnown RBP11.69□□□□□ -0.54
PAPD4-202ENST00000423041 NCOA1Q15788 1441 aa11.69□□□□□ -0.54
PAPD4-202ENST00000423041 USP19O94966 1318 aa11.69□□□□□ -0.54
PAPD4-202ENST00000423041 SLC52A1Q9NWF4 448 aa11.69□□□□□ -0.54
PAPD4-202ENST00000423041 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
PAPD4-202ENST00000423041 ABCC1P33527 1531 aa11.68□□□□□ -0.54
PAPD4-202ENST00000423041 NAIPQ13075 1403 aa11.68□□□□□ -0.54
PAPD4-202ENST00000423041 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
PAPD4-202ENST00000423041 CHMP5Q9NZZ3 219 aa11.68□□□□□ -0.54
PAPD4-202ENST00000423041 ANKRD50Q9ULJ7 1429 aa11.68□□□□□ -0.54
PAPD4-202ENST00000423041 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
PAPD4-202ENST00000423041 NOL7Q9UMY1 257 aaKnown RBP11.67□□□□□ -0.54
PAPD4-202ENST00000423041 ZNF518AQ6AHZ1 1483 aa11.67□□□□□ -0.54
PAPD4-202ENST00000423041 NEO1Q92859 1461 aa11.67□□□□□ -0.54
PAPD4-202ENST00000423041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.67□□□□□ -0.54
PAPD4-202ENST00000423041 DNMT1P26358 1616 aaKnown RBP11.67□□□□□ -0.54
PAPD4-202ENST00000423041 HS1BP3Q53T59 392 aa11.67□□□□□ -0.54
PAPD4-202ENST00000423041 NUP155O75694 1391 aa11.67□□□□□ -0.54
PAPD4-202ENST00000423041 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
PAPD4-202ENST00000423041 FAM193AP78312 1265 aa11.66□□□□□ -0.54
PAPD4-202ENST00000423041 NBPF1Q3BBV0 1214 aa11.66□□□□□ -0.54
PAPD4-202ENST00000423041 NGEFQ8N5V2 710 aa11.66□□□□□ -0.54
PAPD4-202ENST00000423041 TBC1D2Q9BYX2 928 aa11.66□□□□□ -0.54
PAPD4-202ENST00000423041 GLI2P10070 1586 aa11.66□□□□□ -0.54
PAPD4-202ENST00000423041 HFM1A2PYH4 1435 aa11.66□□□□□ -0.54
PAPD4-202ENST00000423041 KIF13AQ9H1H9 1805 aa11.66□□□□□ -0.54
PAPD4-202ENST00000423041 POGZQ7Z3K3 1410 aa11.66□□□□□ -0.54
PAPD4-202ENST00000423041 PTMSP20962 102 aa11.65□□□□□ -0.54
PAPD4-202ENST00000423041 CHMP4CQ96CF2 233 aa11.65□□□□□ -0.54
PAPD4-202ENST00000423041 MAP3K4Q9Y6R4 1608 aa11.65□□□□□ -0.54
PAPD4-202ENST00000423041 COL17A1Q9UMD9 1497 aaPredicted RBP11.65□□□□□ -0.54
PAPD4-202ENST00000423041 PATL2C9JE40 543 aaKnown RBP11.65□□□□□ -0.54
PAPD4-202ENST00000423041 PNISRQ8TF01 805 aaKnown RBP11.65□□□□□ -0.54
PAPD4-202ENST00000423041 ZBTB9Q96C00 473 aa11.65□□□□□ -0.54
PAPD4-202ENST00000423041 ESF1Q9H501 851 aaKnown RBP11.65□□□□□ -0.54
PAPD4-202ENST00000423041 PANK3Q9H999 370 aa11.65□□□□□ -0.54
PAPD4-202ENST00000423041 PSEN1P49768 467 aa11.65□□□□□ -0.54
PAPD4-202ENST00000423041 CCDC66A2RUB6 948 aa11.64□□□□□ -0.55
PAPD4-202ENST00000423041 TRIM6-TRIM34B2RNG4 842 aa11.64□□□□□ -0.55
PAPD4-202ENST00000423041 TRIM34Q9BYJ4 488 aa11.64□□□□□ -0.55
PAPD4-202ENST00000423041 ARAP3Q8WWN8 1544 aa11.64□□□□□ -0.55
PAPD4-202ENST00000423041 YEATS2Q9ULM3 1422 aa11.64□□□□□ -0.55
PAPD4-202ENST00000423041 AXDND1Q5T1B0 1012 aaPredicted RBP11.64□□□□□ -0.55
PAPD4-202ENST00000423041 C14orf37Q86TY3 774 aa11.64□□□□□ -0.55
PAPD4-202ENST00000423041 MYRIPQ8NFW9 859 aa11.64□□□□□ -0.55
PAPD4-202ENST00000423041 UPF2Q9HAU5 1272 aaKnown RBP11.64□□□□□ -0.55
PAPD4-202ENST00000423041 ROCK1Q13464 1354 aa11.63□□□□□ -0.55
PAPD4-202ENST00000423041 SOX12O15370 315 aa11.63□□□□□ -0.55
PAPD4-202ENST00000423041 ZNF622Q969S3 477 aaKnown RBP eCLIP11.63□□□□□ -0.55
PAPD4-202ENST00000423041 TIGD1Q96MW7 591 aa11.63□□□□□ -0.55
PAPD4-202ENST00000423041 SEC24BO95487 1268 aa11.63□□□□□ -0.55
PAPD4-202ENST00000423041 ZNF710Q8N1W2 664 aa11.62□□□□□ -0.55
PAPD4-202ENST00000423041 MPHOSPH9Q99550 1183 aa11.62□□□□□ -0.55
PAPD4-202ENST00000423041 PKD2Q13563 968 aa11.62□□□□□ -0.55
PAPD4-202ENST00000423041 TSC1Q92574 1164 aa11.62□□□□□ -0.55
PAPD4-202ENST00000423041 PDE3BQ13370 1112 aa11.62□□□□□ -0.55
PAPD4-202ENST00000423041 SKOR2Q2VWA4 1001 aaPredicted RBP11.62□□□□□ -0.55
PAPD4-202ENST00000423041 ZKSCAN5Q9Y2L8 839 aa11.62□□□□□ -0.55
PAPD4-202ENST00000423041 ARHGEF5Q12774 1597 aa11.61□□□□□ -0.55
PAPD4-202ENST00000423041 CFAP74Q9C0B2 1584 aa11.61□□□□□ -0.55
PAPD4-202ENST00000423041 ATP7AQ04656 1500 aa11.61□□□□□ -0.55
PAPD4-202ENST00000423041 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.61□□□□□ -0.55
PAPD4-202ENST00000423041 JARID2Q92833 1246 aaPredicted RBP11.61□□□□□ -0.55
PAPD4-202ENST00000423041 MCM5P33992 734 aa11.6□□□□□ -0.55
PAPD4-202ENST00000423041 C20orf194Q5TEA3 1177 aa11.6□□□□□ -0.55
PAPD4-202ENST00000423041 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
PAPD4-202ENST00000423041 YY1AP1Q9H869 796 aa11.6□□□□□ -0.55
PAPD4-202ENST00000423041 GEMIN8Q9NWZ8 242 aaKnown RBP11.6□□□□□ -0.55
PAPD4-202ENST00000423041 KIF3AQ9Y496 699 aa11.6□□□□□ -0.55
PAPD4-202ENST00000423041 PTMAP06454 111 aaKnown RBP11.6□□□□□ -0.55
PAPD4-202ENST00000423041 RALBP1Q15311 655 aa11.6□□□□□ -0.55
PAPD4-202ENST00000423041 SHANK2Q9UPX8 1470 aa11.59□□□□□ -0.55
PAPD4-202ENST00000423041 CC2D1BQ5T0F9 858 aaKnown RBP11.59□□□□□ -0.55
PAPD4-202ENST00000423041 PDCL2Q8N4E4 241 aa11.59□□□□□ -0.55
PAPD4-202ENST00000423041 KDM6BO15054 1643 aa11.59□□□□□ -0.55
PAPD4-202ENST00000423041 TSPYL1Q9H0U9 437 aa11.58□□□□□ -0.56
PAPD4-202ENST00000423041 DHX29Q7Z478 1369 aaKnown RBP11.58□□□□□ -0.56
PAPD4-202ENST00000423041 KIF7Q2M1P5 1343 aa11.58□□□□□ -0.56
PAPD4-202ENST00000423041 HMGN5P82970 282 aaKnown RBP11.58□□□□□ -0.56
PAPD4-202ENST00000423041 A2MP01023 1474 aa11.57□□□□□ -0.56
PAPD4-202ENST00000423041 CHGAP10645 457 aaKnown RBP11.57□□□□□ -0.56
PAPD4-202ENST00000423041 RTEL1-TNFRSF6BF6WH68 1400 aa11.57□□□□□ -0.56
PAPD4-202ENST00000423041 KANK1Q14678 1352 aa11.57□□□□□ -0.56
PAPD4-202ENST00000423041 ZFYVE16Q7Z3T8 1539 aa11.57□□□□□ -0.56
PAPD4-202ENST00000423041 PPRC1Q5VV67 1664 aaKnown RBP11.57□□□□□ -0.56
PAPD4-202ENST00000423041 ZBTB7CA1YPR0 619 aa11.57□□□□□ -0.56
PAPD4-202ENST00000423041 CAPN2P17655 700 aa11.57□□□□□ -0.56
PAPD4-202ENST00000423041 PRIMPOLQ96LW4 560 aa11.57□□□□□ -0.56
PAPD4-202ENST00000423041 GBP4Q96PP9 640 aa11.57□□□□□ -0.56
PAPD4-202ENST00000423041 SENP3Q9H4L4 574 aaPredicted RBP11.57□□□□□ -0.56
PAPD4-202ENST00000423041 ADGRL2O95490 1459 aa11.56□□□□□ -0.56
PAPD4-202ENST00000423041 GABPB1Q06547 395 aaPredicted RBP11.56□□□□□ -0.56
PAPD4-202ENST00000423041 CDCA7LQ96GN5 454 aa11.56□□□□□ -0.56
PAPD4-202ENST00000423041 TNNT3P45378 269 aaPredicted RBP11.56□□□□□ -0.56
PAPD4-202ENST00000423041 U2AF2P26368 475 aaKnown RBP eCLIP11.56□□□□□ -0.564e-7■■□□□ 13.3
PAPD4-202ENST00000423041 TBC1D32Q96NH3 1257 aa11.55□□□□□ -0.56
PAPD4-202ENST00000423041 CALCOCO1Q9P1Z2 691 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms