RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 LRCH3Q96II8 777 aa8.57□□□□□ -1.04
PTP4A1P1-201ENST00000420539 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.56□□□□□ -1.04
PTP4A1P1-201ENST00000420539 HRO43593 1189 aa8.55□□□□□ -1.04
PTP4A1P1-201ENST00000420539 GUCA2AQ02747 115 aa8.55□□□□□ -1.04
PTP4A1P1-201ENST00000420539 RSBN1LQ6PCB5 846 aaPredicted RBP8.55□□□□□ -1.04
PTP4A1P1-201ENST00000420539 ANKK1Q8NFD2 765 aa8.55□□□□□ -1.04
PTP4A1P1-201ENST00000420539 HLA-CQ95604 372 aa8.55□□□□□ -1.04
PTP4A1P1-201ENST00000420539 SPTLC1O15269 473 aa8.53□□□□□ -1.04
PTP4A1P1-201ENST00000420539 HOXA2O43364 376 aa8.53□□□□□ -1.04
PTP4A1P1-201ENST00000420539 BCAMP50895 628 aa8.53□□□□□ -1.04
PTP4A1P1-201ENST00000420539 FUT2Q10981 343 aa8.53□□□□□ -1.04
PTP4A1P1-201ENST00000420539 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.53□□□□□ -1.04
PTP4A1P1-201ENST00000420539 PCDHB15Q9Y5E8 787 aa8.53□□□□□ -1.04
PTP4A1P1-201ENST00000420539 FDX1P10109 184 aa8.52□□□□□ -1.05
PTP4A1P1-201ENST00000420539 USP46P62068 366 aa8.52□□□□□ -1.05
PTP4A1P1-201ENST00000420539 QPCTQ16769 361 aa8.52□□□□□ -1.05
PTP4A1P1-201ENST00000420539 FBXO31Q5XUX0 539 aaPredicted RBP8.52□□□□□ -1.05
PTP4A1P1-201ENST00000420539 WNT2BQ93097 391 aa8.52□□□□□ -1.05
PTP4A1P1-201ENST00000420539 NUTM2BA6NNL0 878 aaPredicted RBP8.51□□□□□ -1.05
PTP4A1P1-201ENST00000420539 NUTM2EB1AL46 878 aaPredicted RBP8.51□□□□□ -1.05
PTP4A1P1-201ENST00000420539 KMT5BQ4FZB7 885 aa8.51□□□□□ -1.05
PTP4A1P1-201ENST00000420539 NUTM2DQ5VT03 806 aaPredicted RBP8.51□□□□□ -1.05
PTP4A1P1-201ENST00000420539 NUTM2AQ8IVF1 878 aaPredicted RBP8.51□□□□□ -1.05
PTP4A1P1-201ENST00000420539 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
PTP4A1P1-201ENST00000420539 HPS5Q9UPZ3 1129 aa8.51□□□□□ -1.05
PTP4A1P1-201ENST00000420539 RFC5P40937 340 aa8.5□□□□□ -1.05
PTP4A1P1-201ENST00000420539 SPNS2Q8IVW8 549 aa8.5□□□□□ -1.05
PTP4A1P1-201ENST00000420539 USP35Q9P2H5 1018 aa8.5□□□□□ -1.05
PTP4A1P1-201ENST00000420539 SOWAHBA6NEL2 793 aa8.49□□□□□ -1.05
PTP4A1P1-201ENST00000420539 PPP4CP60510 307 aa8.49□□□□□ -1.05
PTP4A1P1-201ENST00000420539 PUS10Q3MIT2 529 aaKnown RBP8.49□□□□□ -1.05
PTP4A1P1-201ENST00000420539 RETREG2Q8NC44 543 aa8.49□□□□□ -1.05
PTP4A1P1-201ENST00000420539 PCDHGC3Q9UN70 934 aa8.49□□□□□ -1.05
PTP4A1P1-201ENST00000420539 IRF5Q13568 498 aa8.48□□□□□ -1.05
PTP4A1P1-201ENST00000420539 GRIPAP1Q4V328 841 aa8.48□□□□□ -1.05
PTP4A1P1-201ENST00000420539 RTL5Q5HYW3 569 aaPredicted RBP8.48□□□□□ -1.05
PTP4A1P1-201ENST00000420539 ZNF777Q9ULD5 760 aaPredicted RBP8.48□□□□□ -1.05
PTP4A1P1-201ENST00000420539 ATP6V1AP38606 617 aa8.47□□□□□ -1.05
PTP4A1P1-201ENST00000420539 TSC1Q92574 1164 aa8.47□□□□□ -1.05
PTP4A1P1-201ENST00000420539 KCTD12Q96CX2 325 aaKnown RBP8.47□□□□□ -1.05
PTP4A1P1-201ENST00000420539 SERPINA10Q9UK55 444 aa8.47□□□□□ -1.05
PTP4A1P1-201ENST00000420539 C6orf229H3BNL8 230 aa8.46□□□□□ -1.06
PTP4A1P1-201ENST00000420539 LILRB3O75022 631 aa8.46□□□□□ -1.06
PTP4A1P1-201ENST00000420539 AP1G2O75843 785 aa8.46□□□□□ -1.06
PTP4A1P1-201ENST00000420539 GJA5P36382 358 aa8.46□□□□□ -1.06
PTP4A1P1-201ENST00000420539 MCM6Q14566 821 aa8.46□□□□□ -1.06
PTP4A1P1-201ENST00000420539 CCDC97Q96F63 343 aaPredicted RBP8.46□□□□□ -1.06
PTP4A1P1-201ENST00000420539 ZBTB3Q9H5J0 574 aa8.46□□□□□ -1.06
PTP4A1P1-201ENST00000420539 APLP1P51693 650 aa8.45□□□□□ -1.06
PTP4A1P1-201ENST00000420539 TUSC1Q2TAM9 212 aa8.45□□□□□ -1.06
PTP4A1P1-201ENST00000420539 PPP2R2DQ66LE6 453 aa8.45□□□□□ -1.06
PTP4A1P1-201ENST00000420539 SYMPKQ92797 1274 aaKnown RBP8.45□□□□□ -1.06
PTP4A1P1-201ENST00000420539 TSR3Q9UJK0 312 aaKnown RBP8.45□□□□□ -1.06
PTP4A1P1-201ENST00000420539 ACTN4O43707 911 aaKnown RBP8.44□□□□□ -1.06
PTP4A1P1-201ENST00000420539 SNRKQ9NRH2 765 aa8.44□□□□□ -1.06
PTP4A1P1-201ENST00000420539 WBP1LQ9NX94 342 aa8.44□□□□□ -1.06
PTP4A1P1-201ENST00000420539 MTMR2Q13614 643 aa8.43□□□□□ -1.06
PTP4A1P1-201ENST00000420539 TMEM259Q4ZIN3 620 aa8.43□□□□□ -1.06
PTP4A1P1-201ENST00000420539 MORN1Q5T089 497 aa8.43□□□□□ -1.06
PTP4A1P1-201ENST00000420539 PRPF38BQ5VTL8 546 aaKnown RBP8.43□□□□□ -1.06
PTP4A1P1-201ENST00000420539 PRR14Q9BWN1 585 aa8.43□□□□□ -1.06
PTP4A1P1-201ENST00000420539 MMRN1Q13201 1228 aa8.42□□□□□ -1.06
PTP4A1P1-201ENST00000420539 SLC27A5Q9Y2P5 690 aa8.42□□□□□ -1.06
PTP4A1P1-201ENST00000420539 PCDHB3Q9Y5E6 796 aa8.42□□□□□ -1.06
PTP4A1P1-201ENST00000420539 THSD4Q6ZMP0 1018 aa8.41□□□□□ -1.06
PTP4A1P1-201ENST00000420539 PROSER2Q86WR7 435 aaPredicted RBP8.41□□□□□ -1.06
PTP4A1P1-201ENST00000420539 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
PTP4A1P1-201ENST00000420539 PTPN5P54829 565 aa8.4□□□□□ -1.06
PTP4A1P1-201ENST00000420539 FAM177A1Q8N128 213 aaPredicted RBP8.4□□□□□ -1.06
PTP4A1P1-201ENST00000420539 POM121Q96HA1 1249 aa8.4□□□□□ -1.06
PTP4A1P1-201ENST00000420539 MYT1LQ9UL68 1186 aa8.4□□□□□ -1.06
PTP4A1P1-201ENST00000420539 SPDYE5A6NIY4 337 aa8.39□□□□□ -1.07
PTP4A1P1-201ENST00000420539 CFAP99D6REC4 459 aa8.39□□□□□ -1.07
PTP4A1P1-201ENST00000420539 COPS2P61201 443 aa8.39□□□□□ -1.07
PTP4A1P1-201ENST00000420539 BLOC1S3Q6QNY0 202 aa8.39□□□□□ -1.07
PTP4A1P1-201ENST00000420539 BANK1Q8NDB2 785 aa8.39□□□□□ -1.07
PTP4A1P1-201ENST00000420539 CTDSPL2Q05D32 466 aa8.38□□□□□ -1.07
PTP4A1P1-201ENST00000420539 RNF19BQ6ZMZ0 732 aa8.38□□□□□ -1.07
PTP4A1P1-201ENST00000420539 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
PTP4A1P1-201ENST00000420539 PRR7Q8TB68 274 aa8.38□□□□□ -1.07
PTP4A1P1-201ENST00000420539 Q3C1V9 767 aa8.37□□□□□ -1.07
PTP4A1P1-201ENST00000420539 FNBP4Q8N3X1 1017 aaPredicted RBP8.37□□□□□ -1.07
PTP4A1P1-201ENST00000420539 MTMR14Q8NCE2 650 aa8.37□□□□□ -1.07
PTP4A1P1-201ENST00000420539 NR1I2O75469 434 aa8.36□□□□□ -1.07
PTP4A1P1-201ENST00000420539 SCUBE3Q8IX30 993 aa8.36□□□□□ -1.07
PTP4A1P1-201ENST00000420539 RNF166Q96A37 237 aaPredicted RBP8.36□□□□□ -1.07
PTP4A1P1-201ENST00000420539 AMOTL2Q9Y2J4 779 aa8.36□□□□□ -1.07
PTP4A1P1-201ENST00000420539 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
PTP4A1P1-201ENST00000420539 LRRN4Q8WUT4 740 aa8.35□□□□□ -1.07
PTP4A1P1-201ENST00000420539 FMNL1O95466 1100 aaPredicted RBP8.34□□□□□ -1.07
PTP4A1P1-201ENST00000420539 DHX37Q8IY37 1157 aaKnown RBP8.34□□□□□ -1.07
PTP4A1P1-201ENST00000420539 GDPD2Q9HCC8 539 aa8.34□□□□□ -1.07
PTP4A1P1-201ENST00000420539 HMX1Q9NP08 348 aaPredicted RBP8.34□□□□□ -1.07
PTP4A1P1-201ENST00000420539 COG6Q9Y2V7 657 aa8.34□□□□□ -1.07
PTP4A1P1-201ENST00000420539 USB1Q9BQ65 265 aaKnown RBP8.33□□□□□ -1.08
PTP4A1P1-201ENST00000420539 PATL2C9JE40 543 aaKnown RBP8.32□□□□□ -1.08
PTP4A1P1-201ENST00000420539 PER1O15534 1290 aaPredicted RBP8.32□□□□□ -1.08
PTP4A1P1-201ENST00000420539 TLL1O43897 1013 aa8.32□□□□□ -1.08
PTP4A1P1-201ENST00000420539 BRD2P25440 801 aaKnown RBP8.32□□□□□ -1.08
PTP4A1P1-201ENST00000420539 ABL2P42684 1182 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms