RNA–Protein interactions for RNA: ENST00000420421.1

PMS1-207, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-207ENST00000420421 USP47Q96K76 1375 aa7.2□□□□□ -1.26
PMS1-207ENST00000420421 HSPA5P11021 654 aaKnown RBP7.2□□□□□ -1.26
PMS1-207ENST00000420421 CEBPAP49715 358 aaPredicted RBP7.2□□□□□ -1.26
PMS1-207ENST00000420421 SETD1AO15047 1707 aaKnown RBP7.2□□□□□ -1.26
PMS1-207ENST00000420421 DIP2AQ14689 1571 aa7.2□□□□□ -1.26
PMS1-207ENST00000420421 KNDC1Q76NI1 1749 aa7.19□□□□□ -1.26
PMS1-207ENST00000420421 CDCA8Q53HL2 280 aa7.19□□□□□ -1.26
PMS1-207ENST00000420421 ALKQ9UM73 1620 aa7.19□□□□□ -1.26
PMS1-207ENST00000420421 PLEKHG1Q9ULL1 1385 aa7.19□□□□□ -1.26
PMS1-207ENST00000420421 ADGRB1O14514 1584 aa7.18□□□□□ -1.26
PMS1-207ENST00000420421 NBPF1Q3BBV0 1214 aa7.18□□□□□ -1.26
PMS1-207ENST00000420421 CFAP70Q5T0N1 1121 aa7.18□□□□□ -1.26
PMS1-207ENST00000420421 SIRT1Q96EB6 747 aa7.18□□□□□ -1.26
PMS1-207ENST00000420421 SPINK5Q9NQ38 1064 aaPredicted RBP7.18□□□□□ -1.26
PMS1-207ENST00000420421 SBNO2Q9Y2G9 1366 aa7.18□□□□□ -1.26
PMS1-207ENST00000420421 ANKLE2Q86XL3 938 aa7.17□□□□□ -1.26
PMS1-207ENST00000420421 PUS7Q96PZ0 661 aaKnown RBP7.17□□□□□ -1.26
PMS1-207ENST00000420421 ARHGEF28Q8N1W1 1705 aaKnown RBP7.17□□□□□ -1.26
PMS1-207ENST00000420421 PIK3R4Q99570 1358 aa7.17□□□□□ -1.26
PMS1-207ENST00000420421 DLC1Q96QB1 1528 aa7.17□□□□□ -1.26
PMS1-207ENST00000420421 NRXN3Q9Y4C0 1643 aa7.16□□□□□ -1.26
PMS1-207ENST00000420421 CHD2O14647 1828 aaKnown RBP7.16□□□□□ -1.26
PMS1-207ENST00000420421 ST20-MTHFSA0A0A6YYL1 179 aa7.16□□□□□ -1.26
PMS1-207ENST00000420421 PLEKHG5O94827 1062 aa7.16□□□□□ -1.26
PMS1-207ENST00000420421 TMF1P82094 1093 aa7.16□□□□□ -1.26
PMS1-207ENST00000420421 TXNDC2Q86VQ3 553 aa7.16□□□□□ -1.26
PMS1-207ENST00000420421 ZNF692Q9BU19 519 aaPredicted RBP7.16□□□□□ -1.26
PMS1-207ENST00000420421 ZBTB47Q9UFB7 747 aaPredicted RBP7.16□□□□□ -1.26
PMS1-207ENST00000420421 TBX22Q9Y458 520 aa7.16□□□□□ -1.26
PMS1-207ENST00000420421 MED14O60244 1454 aa7.16□□□□□ -1.26
PMS1-207ENST00000420421 QRICH2Q9H0J4 1663 aa7.16□□□□□ -1.26
PMS1-207ENST00000420421 DIEXFQ68CQ4 756 aaKnown RBP7.15□□□□□ -1.26
PMS1-207ENST00000420421 ABCC11Q96J66 1382 aa7.15□□□□□ -1.26
PMS1-207ENST00000420421 CAPN15O75808 1086 aa7.14□□□□□ -1.27
PMS1-207ENST00000420421 LTKP29376 864 aa7.14□□□□□ -1.27
PMS1-207ENST00000420421 LRPPRCP42704 1394 aaKnown RBP7.14□□□□□ -1.27
PMS1-207ENST00000420421 CCDC7Q96M83 1385 aa7.14□□□□□ -1.27
PMS1-207ENST00000420421 YTHDC2Q9H6S0 1430 aaKnown RBP7.14□□□□□ -1.27
PMS1-207ENST00000420421 CENPJQ9HC77 1338 aaPredicted RBP7.14□□□□□ -1.27
PMS1-207ENST00000420421 TECPR2O15040 1411 aa7.13□□□□□ -1.27
PMS1-207ENST00000420421 FAM135BQ49AJ0 1406 aa7.13□□□□□ -1.27
PMS1-207ENST00000420421 ADAMTS13Q76LX8 1427 aa7.13□□□□□ -1.27
PMS1-207ENST00000420421 TESK2Q96S53 571 aa7.13□□□□□ -1.27
PMS1-207ENST00000420421 CPS1P31327 1500 aa7.12□□□□□ -1.27
PMS1-207ENST00000420421 ASXL1Q8IXJ9 1541 aa7.12□□□□□ -1.27
PMS1-207ENST00000420421 KDM4FA0A1W2PPD8 638 aa7.12□□□□□ -1.27
PMS1-207ENST00000420421 GTPBP6O43824 516 aaPredicted RBP7.12□□□□□ -1.27
PMS1-207ENST00000420421 NUTM2DQ5VT03 806 aaPredicted RBP7.12□□□□□ -1.27
PMS1-207ENST00000420421 KIF7Q2M1P5 1343 aa7.11□□□□□ -1.27
PMS1-207ENST00000420421 WASHC2AQ641Q2 1341 aa7.11□□□□□ -1.27
PMS1-207ENST00000420421 NKX1-1Q15270 411 aaPredicted RBP7.11□□□□□ -1.27
PMS1-207ENST00000420421 TMEM132EQ6IEE7 984 aa7.11□□□□□ -1.27
PMS1-207ENST00000420421 HIRIP3Q9BW71 556 aaPredicted RBP7.11□□□□□ -1.27
PMS1-207ENST00000420421 TRAK1Q9UPV9 953 aa7.11□□□□□ -1.27
PMS1-207ENST00000420421 PTCH1Q13635 1447 aa7.1□□□□□ -1.27
PMS1-207ENST00000420421 XRN1Q8IZH2 1706 aaKnown RBP7.1□□□□□ -1.27
PMS1-207ENST00000420421 NINLQ9Y2I6 1382 aa7.1□□□□□ -1.27
PMS1-207ENST00000420421 EVC2Q86UK5 1308 aa7.1□□□□□ -1.27
PMS1-207ENST00000420421 DDX10Q13206 875 aaKnown RBP7.1□□□□□ -1.27
PMS1-207ENST00000420421 RNF25Q96BH1 459 aaPredicted RBP7.1□□□□□ -1.27
PMS1-207ENST00000420421 POGKQ9P215 609 aa7.1□□□□□ -1.27
PMS1-207ENST00000420421 NPHP4O75161 1426 aaPredicted RBP7.1□□□□□ -1.27
PMS1-207ENST00000420421 METP08581 1390 aa7.09□□□□□ -1.27
PMS1-207ENST00000420421 KTN1Q86UP2 1357 aaKnown RBP7.08□□□□□ -1.28
PMS1-207ENST00000420421 ADGRB2O60241 1585 aa7.08□□□□□ -1.28
PMS1-207ENST00000420421 C11orf95C9JLR9 678 aaPredicted RBP7.08□□□□□ -1.28
PMS1-207ENST00000420421 STRCQ7RTU9 1775 aa7.08□□□□□ -1.28
PMS1-207ENST00000420421 ATAD2Q6PL18 1390 aa7.08□□□□□ -1.28
PMS1-207ENST00000420421 ITSN1Q15811 1721 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 MYOM1P52179 1685 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 LMTK3Q96Q04 1460 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 SPDYE2BA6NHP3 402 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 ANP32CO43423 234 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 SPDYE6P0CI01 402 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 GSE1Q14687 1217 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 SPDYE2Q495Y8 402 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 PRAM1Q96QH2 718 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 STK26Q9P289 416 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 AMOTL2Q9Y2J4 779 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 SSUH2Q9Y2M2 353 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 NCOA3Q9Y6Q9 1424 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 NWD1Q149M9 1564 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 DISP3Q9P2K9 1392 aa7.07□□□□□ -1.28
PMS1-207ENST00000420421 ABCB7O75027 752 aa7.06□□□□□ -1.28
PMS1-207ENST00000420421 KCNA6P17658 529 aa7.06□□□□□ -1.28
PMS1-207ENST00000420421 SLC26A8Q96RN1 970 aa7.06□□□□□ -1.28
PMS1-207ENST00000420421 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.06□□□□□ -1.28
PMS1-207ENST00000420421 NPC1L1Q9UHC9 1359 aa7.06□□□□□ -1.28
PMS1-207ENST00000420421 NKTRP30414 1462 aaKnown RBP7.05□□□□□ -1.28
PMS1-207ENST00000420421 PTPRUQ92729 1446 aa7.05□□□□□ -1.28
PMS1-207ENST00000420421 RIOK3O14730 519 aaKnown RBP7.05□□□□□ -1.28
PMS1-207ENST00000420421 TULP4Q9NRJ4 1543 aa7.05□□□□□ -1.28
PMS1-207ENST00000420421 CCER2I3L3R5 266 aa7.04□□□□□ -1.28
PMS1-207ENST00000420421 WASLO00401 505 aaPredicted RBP7.04□□□□□ -1.28
PMS1-207ENST00000420421 STK25O00506 426 aa7.04□□□□□ -1.28
PMS1-207ENST00000420421 LMOD2Q6P5Q4 547 aa7.04□□□□□ -1.28
PMS1-207ENST00000420421 AKAP12Q02952 1782 aa7.04□□□□□ -1.28
PMS1-207ENST00000420421 USP32Q8NFA0 1604 aa7.04□□□□□ -1.28
PMS1-207ENST00000420421 ROBO2Q9HCK4 1378 aa7.04□□□□□ -1.28
PMS1-207ENST00000420421 NCKAP5LQ9HCH0 1330 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms