RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 BCAMP50895 628 aa9.7□□□□□ -0.86
TVP23C-202ENST00000419890 ANKK1Q8NFD2 765 aa9.7□□□□□ -0.86
TVP23C-202ENST00000419890 TCOF1Q13428 1488 aaKnown RBP9.7□□□□□ -0.86
TVP23C-202ENST00000419890 SOWAHBA6NEL2 793 aa9.69□□□□□ -0.86
TVP23C-202ENST00000419890 CD109Q6YHK3 1445 aa9.69□□□□□ -0.86
TVP23C-202ENST00000419890 MYOM3Q5VTT5 1437 aa9.68□□□□□ -0.86
TVP23C-202ENST00000419890 PHF14O94880 888 aa9.68□□□□□ -0.86
TVP23C-202ENST00000419890 TYW1BQ6NUM6 668 aa9.68□□□□□ -0.86
TVP23C-202ENST00000419890 LAPTM4BQ86VI4 370 aa9.68□□□□□ -0.86
TVP23C-202ENST00000419890 MAP3K4Q9Y6R4 1608 aa9.67□□□□□ -0.86
TVP23C-202ENST00000419890 NAIPQ13075 1403 aa9.67□□□□□ -0.86
TVP23C-202ENST00000419890 FBXW7Q969H0 707 aa9.67□□□□□ -0.86
TVP23C-202ENST00000419890 CDK11AQ9UQ88 783 aaPredicted RBP9.67□□□□□ -0.86
TVP23C-202ENST00000419890 KDM6BO15054 1643 aa9.67□□□□□ -0.86
TVP23C-202ENST00000419890 TEX14Q8IWB6 1497 aa9.66□□□□□ -0.86
TVP23C-202ENST00000419890 CNTLNQ9NXG0 1405 aa9.66□□□□□ -0.86
TVP23C-202ENST00000419890 LRRIQ1Q96JM4 1722 aa9.66□□□□□ -0.86
TVP23C-202ENST00000419890 CADPS2Q86UW7 1296 aa9.66□□□□□ -0.86
TVP23C-202ENST00000419890 ZFRQ96KR1 1074 aaKnown RBP9.66□□□□□ -0.86
TVP23C-202ENST00000419890 KIAA1468Q9P260 1216 aa9.66□□□□□ -0.86
TVP23C-202ENST00000419890 PPRC1Q5VV67 1664 aaKnown RBP9.66□□□□□ -0.86
TVP23C-202ENST00000419890 ONECUT3O60422 494 aaPredicted RBP9.65□□□□□ -0.86
TVP23C-202ENST00000419890 FAM50AQ14320 339 aaKnown RBP9.65□□□□□ -0.86
TVP23C-202ENST00000419890 CDK13Q14004 1512 aaKnown RBP9.65□□□□□ -0.86
TVP23C-202ENST00000419890 ITGAEP38570 1179 aa9.64□□□□□ -0.87
TVP23C-202ENST00000419890 SIN3AQ96ST3 1273 aa9.64□□□□□ -0.87
TVP23C-202ENST00000419890 WBP1LQ9NX94 342 aa9.64□□□□□ -0.87
TVP23C-202ENST00000419890 MAGI3Q5TCQ9 1506 aa9.63□□□□□ -0.87
TVP23C-202ENST00000419890 NYAP1Q6ZVC0 841 aa9.63□□□□□ -0.87
TVP23C-202ENST00000419890 BCANQ96GW7 911 aa9.63□□□□□ -0.87
TVP23C-202ENST00000419890 C6orf132Q5T0Z8 1188 aa9.62□□□□□ -0.87
TVP23C-202ENST00000419890 NCOA1Q15788 1441 aa9.62□□□□□ -0.87
TVP23C-202ENST00000419890 MIA2Q96PC5 1412 aa9.62□□□□□ -0.87
TVP23C-202ENST00000419890 MTUS2Q5JR59 1369 aa9.62□□□□□ -0.87
TVP23C-202ENST00000419890 COL17A1Q9UMD9 1497 aaPredicted RBP9.61□□□□□ -0.87
TVP23C-202ENST00000419890 ABCA9Q8IUA7 1624 aa9.61□□□□□ -0.87
TVP23C-202ENST00000419890 CAMK2BQ13554 666 aa9.61□□□□□ -0.87
TVP23C-202ENST00000419890 PPP4R2Q9NY27 417 aa9.61□□□□□ -0.87
TVP23C-202ENST00000419890 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
TVP23C-202ENST00000419890 PTPRKQ15262 1439 aa9.6□□□□□ -0.87
TVP23C-202ENST00000419890 ZBED9Q6R2W3 1325 aa9.59□□□□□ -0.87
TVP23C-202ENST00000419890 TRIM6-TRIM34B2RNG4 842 aa9.59□□□□□ -0.87
TVP23C-202ENST00000419890 KCNC4Q03721 635 aa9.59□□□□□ -0.87
TVP23C-202ENST00000419890 ERICH6Q7L0X2 663 aa9.59□□□□□ -0.87
TVP23C-202ENST00000419890 EPAS1Q99814 870 aa9.59□□□□□ -0.87
TVP23C-202ENST00000419890 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.58□□□□□ -0.88
TVP23C-202ENST00000419890 TRIM52Q96A61 297 aa9.58□□□□□ -0.88
TVP23C-202ENST00000419890 TROQ12816 1431 aaPredicted RBP9.57□□□□□ -0.88
TVP23C-202ENST00000419890 RAPGEF3O95398 923 aa9.57□□□□□ -0.88
TVP23C-202ENST00000419890 FAM98CQ17RN3 349 aaKnown RBP9.57□□□□□ -0.88
TVP23C-202ENST00000419890 ROCK1Q13464 1354 aa9.57□□□□□ -0.88
TVP23C-202ENST00000419890 DENND4BO75064 1496 aaPredicted RBP9.57□□□□□ -0.88
TVP23C-202ENST00000419890 RPRD2Q5VT52 1461 aaKnown RBP9.56□□□□□ -0.88
TVP23C-202ENST00000419890 LCE2BO14633 110 aa9.56□□□□□ -0.88
TVP23C-202ENST00000419890 HNRNPUQ00839 825 aaKnown RBP eCLIP9.56□□□□□ -0.88
TVP23C-202ENST00000419890 EFCAB2Q5VUJ9 269 aa9.56□□□□□ -0.88
TVP23C-202ENST00000419890 Q6ZNB5 142 aa9.56□□□□□ -0.88
TVP23C-202ENST00000419890 ARAP3Q8WWN8 1544 aa9.56□□□□□ -0.88
TVP23C-202ENST00000419890 TTC37Q6PGP7 1564 aa9.55□□□□□ -0.88
TVP23C-202ENST00000419890 NEO1Q92859 1461 aa9.55□□□□□ -0.88
TVP23C-202ENST00000419890 DPYSL4O14531 572 aa9.55□□□□□ -0.88
TVP23C-202ENST00000419890 EIF4G2P78344 907 aaKnown RBP eCLIP9.55□□□□□ -0.88
TVP23C-202ENST00000419890 TSR3Q9UJK0 312 aaKnown RBP9.55□□□□□ -0.88
TVP23C-202ENST00000419890 DNMT1P26358 1616 aaKnown RBP9.55□□□□□ -0.88
TVP23C-202ENST00000419890 PLCH2O75038 1416 aa9.55□□□□□ -0.88
TVP23C-202ENST00000419890 WASHC2AQ641Q2 1341 aa9.55□□□□□ -0.88
TVP23C-202ENST00000419890 FANCAO15360 1455 aa9.54□□□□□ -0.88
TVP23C-202ENST00000419890 CCDC7Q96M83 1385 aa9.54□□□□□ -0.88
TVP23C-202ENST00000419890 KIF14Q15058 1648 aa9.54□□□□□ -0.88
TVP23C-202ENST00000419890 SMG6Q86US8 1419 aaKnown RBP9.54□□□□□ -0.88
TVP23C-202ENST00000419890 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.53□□□□□ -0.88
TVP23C-202ENST00000419890 HPS5Q9UPZ3 1129 aa9.53□□□□□ -0.88
TVP23C-202ENST00000419890 ARID4BQ4LE39 1312 aaPredicted RBP9.53□□□□□ -0.88
TVP23C-202ENST00000419890 SPATA31E1Q6ZUB1 1445 aa9.52□□□□□ -0.89
TVP23C-202ENST00000419890 RBM33Q96EV2 1170 aaKnown RBP9.52□□□□□ -0.89
TVP23C-202ENST00000419890 LRCH3Q96II8 777 aa9.52□□□□□ -0.89
TVP23C-202ENST00000419890 TSKSQ9UJT2 592 aa9.52□□□□□ -0.89
TVP23C-202ENST00000419890 RNF123Q5XPI4 1314 aa9.52□□□□□ -0.89
TVP23C-202ENST00000419890 ADGBQ8N7X0 1667 aa9.51□□□□□ -0.89
TVP23C-202ENST00000419890 MYO5CQ9NQX4 1742 aa9.51□□□□□ -0.89
TVP23C-202ENST00000419890 CFAP74Q9C0B2 1584 aa9.51□□□□□ -0.89
TVP23C-202ENST00000419890 HSPA5P11021 654 aaKnown RBP9.51□□□□□ -0.89
TVP23C-202ENST00000419890 ZNF777Q9ULD5 760 aaPredicted RBP9.51□□□□□ -0.89
TVP23C-202ENST00000419890 MBD5Q9P267 1494 aa9.51□□□□□ -0.89
TVP23C-202ENST00000419890 ARHGAP5Q13017 1502 aa9.51□□□□□ -0.89
TVP23C-202ENST00000419890 SCAPERQ9BY12 1400 aa9.5□□□□□ -0.89
TVP23C-202ENST00000419890 DDX12PQ92771 950 aa9.5□□□□□ -0.89
TVP23C-202ENST00000419890 PRKRIP1Q9H875 184 aaPredicted RBP9.5□□□□□ -0.89
TVP23C-202ENST00000419890 ADGRL1O94910 1474 aa9.49□□□□□ -0.89
TVP23C-202ENST00000419890 ROCK2O75116 1388 aaKnown RBP9.49□□□□□ -0.89
TVP23C-202ENST00000419890 KTN1Q86UP2 1357 aaKnown RBP9.49□□□□□ -0.89
TVP23C-202ENST00000419890 ITSN2Q9NZM3 1697 aa9.48□□□□□ -0.89
TVP23C-202ENST00000419890 EN1Q05925 392 aaPredicted RBP9.48□□□□□ -0.89
TVP23C-202ENST00000419890 TSR1Q2NL82 804 aaKnown RBP9.48□□□□□ -0.89
TVP23C-202ENST00000419890 CFDP1Q9UEE9 299 aaPredicted RBP9.48□□□□□ -0.89
TVP23C-202ENST00000419890 ANKRD30BQ9BXX2 1392 aa9.48□□□□□ -0.89
TVP23C-202ENST00000419890 ZMYM4Q5VZL5 1548 aa9.47□□□□□ -0.89
TVP23C-202ENST00000419890 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
TVP23C-202ENST00000419890 AFAP1Q8N556 730 aa9.47□□□□□ -0.89
TVP23C-202ENST00000419890 CROCC2H7BZ55 1655 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms