RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CLK2P49760 499 aaKnown RBP4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 FAM50AQ14320 339 aaKnown RBP4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 LONRF3Q496Y0 759 aa4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 SDE2Q6IQ49 451 aa4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 NPAS4Q8IUM7 802 aa4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 MTMR14Q8NCE2 650 aa4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 KCNB2Q92953 911 aa4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 BEGAINQ9BUH8 593 aa4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 BRINP2Q9C0B6 783 aa4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 COLQQ9Y215 455 aaPredicted RBP4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 CCDC194A0A1B0GVG4 234 aa4.19□□□□□ -1.74
CTDSPL-203ENST00000416688 ANKRD33BA6NCL7 494 aa4.19□□□□□ -1.74
CTDSPL-203ENST00000416688 PALM3A6NDB9 673 aaPredicted RBP4.19□□□□□ -1.74
CTDSPL-203ENST00000416688 DPYSL4O14531 572 aa4.19□□□□□ -1.74
CTDSPL-203ENST00000416688 CREB3O43889 395 aa4.19□□□□□ -1.74
CTDSPL-203ENST00000416688 RNF187Q5TA31 235 aaPredicted RBP4.19□□□□□ -1.74
CTDSPL-203ENST00000416688 TMTC2Q8N394 836 aa4.19□□□□□ -1.74
CTDSPL-203ENST00000416688 LARGE2Q8N3Y3 721 aa4.19□□□□□ -1.74
CTDSPL-203ENST00000416688 ARMC5Q96C12 935 aa4.19□□□□□ -1.74
CTDSPL-203ENST00000416688 TRIM35Q9UPQ4 493 aa4.19□□□□□ -1.74
CTDSPL-203ENST00000416688 NOP58Q9Y2X3 529 aaKnown RBP4.19□□□□□ -1.74
CTDSPL-203ENST00000416688 SH3BP5O60239 455 aa4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 MAP4K4O95819 1239 aaPredicted RBP4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 ATP2B1P20020 1258 aa4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 PSEN1P49768 467 aa4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 TSNAXIP1Q2TAA8 658 aa4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 SOGA3Q5TF21 947 aa4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 EGFLAMQ63HQ2 1017 aa4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 PPP2R2DQ66LE6 453 aa4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 REPIN1Q9BWE0 567 aaKnown RBP4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 LNPKQ9C0E8 428 aa4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 KLHL42Q9P2K6 505 aa4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 PCDHB8Q9UN66 801 aa4.18□□□□□ -1.74
CTDSPL-203ENST00000416688 GRXCR2A6NFK2 248 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 SOWAHDA6NJG2 315 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 SCAMP3O14828 347 aaKnown RBP4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 RECKO95980 971 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 PTMAP06454 111 aaKnown RBP4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 ITGAEP38570 1179 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 GRIPAP1Q4V328 841 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 PPP1R15BQ5SWA1 713 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 IER5LQ5T953 404 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 WDR78Q5VTH9 848 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 MYSM1Q5VVJ2 828 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 CNPY4Q8N129 248 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 SPACA7Q96KW9 195 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 SPOCK3Q9BQ16 436 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 TMUB1Q9BVT8 246 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 TMEM106CQ9BVX2 250 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 NLRP2Q9NX02 1062 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 BIN2Q9UBW5 565 aaPredicted RBP4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 TBC1D2BQ9UPU7 963 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 FAN1Q9Y2M0 1017 aa4.17□□□□□ -1.74
CTDSPL-203ENST00000416688 PARNO95453 639 aaKnown RBP4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 LIG1P18858 919 aa4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 FECHP22830 423 aa4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 GNL2Q13823 731 aaKnown RBP4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 ELOAQ14241 798 aaKnown RBP4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 CCDC144BQ3MJ40 725 aa4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 ZFYVE27Q5T4F4 411 aa4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 PIK3R5Q8WYR1 880 aa4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 SGSM3Q96HU1 749 aa4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 GPATCH3Q96I76 525 aa4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 TFIP11Q9UBB9 837 aaKnown RBP4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 PHF8Q9UPP1 1060 aa4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 NDUFB9Q9Y6M9 179 aa4.16□□□□□ -1.74
CTDSPL-203ENST00000416688 U2SURPO15042 1029 aaKnown RBP4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 HSP90AA1P07900 732 aaKnown RBP4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 SOX11P35716 441 aa4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 IRX5P78411 483 aaPredicted RBP4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 MDM2Q00987 491 aaPredicted RBP4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 PSME1Q06323 249 aa4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 FOXD4L6Q3SYB3 417 aaPredicted RBP4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 CDCA8Q53HL2 280 aa4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 FOXD4L3Q6VB84 417 aaPredicted RBP4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 NME8Q8N427 588 aa4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 EFCAB3Q8N7B9 438 aa4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 SLC43A3Q8NBI5 491 aa4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 ADAMTS19Q8TE59 1207 aa4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 PNISRQ8TF01 805 aaKnown RBP4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 TRIM34Q9BYJ4 488 aa4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 CHPF2Q9P2E5 772 aa4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 PRKAG2Q9UGJ0 569 aa4.15□□□□□ -1.75
CTDSPL-203ENST00000416688 LZTS3O60299 673 aaPredicted RBP4.14□□□□□ -1.75
CTDSPL-203ENST00000416688 GTF2F1P35269 517 aaKnown RBP eCLIP4.14□□□□□ -1.75
CTDSPL-203ENST00000416688 OS9Q13438 667 aaPredicted RBP4.14□□□□□ -1.75
CTDSPL-203ENST00000416688 LCE2DQ5TA82 110 aaPredicted RBP4.14□□□□□ -1.75
CTDSPL-203ENST00000416688 MAMSTRQ6ZN01 415 aa4.14□□□□□ -1.75
CTDSPL-203ENST00000416688 KRBA2Q6ZNG9 492 aa4.14□□□□□ -1.75
CTDSPL-203ENST00000416688 PMM1Q92871 262 aa4.14□□□□□ -1.75
CTDSPL-203ENST00000416688 COMMD10Q9Y6G5 202 aa4.14□□□□□ -1.75
CTDSPL-203ENST00000416688 PPFIA4O75335 1185 aa4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 SEC24BO95487 1268 aa4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 HSD3B2P26439 372 aa4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 CALRP27797 417 aaKnown RBP4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 BIRC2Q13490 618 aa4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 COL19A1Q14993 1142 aa4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 NOM1Q5C9Z4 860 aaKnown RBP4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 TSHZ1Q6ZSZ6 1077 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms