RNA–Protein interactions for RNA: ENST00000412964.6

CCDC138-203, Transcript of coiled-coil domain containing 138, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC138, Length 2,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-203ENST00000412964 DLC1Q96QB1 1528 aa18.95■□□□□ 0.62
CCDC138-203ENST00000412964 SLC12A5Q9H2X9 1139 aa18.95■□□□□ 0.62
CCDC138-203ENST00000412964 PLEKHH1Q9ULM0 1364 aa18.95■□□□□ 0.62
CCDC138-203ENST00000412964 ZNF142P52746 1687 aaPredicted RBP18.94■□□□□ 0.62
CCDC138-203ENST00000412964 MYBBP1AQ9BQG0 1328 aaKnown RBP18.94■□□□□ 0.62
CCDC138-203ENST00000412964 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
CCDC138-203ENST00000412964 KNDC1Q76NI1 1749 aa18.92■□□□□ 0.62
CCDC138-203ENST00000412964 ANKLE2Q86XL3 938 aa18.9■□□□□ 0.62
CCDC138-203ENST00000412964 CDK19Q9BWU1 502 aa18.9■□□□□ 0.62
CCDC138-203ENST00000412964 AMER1Q5JTC6 1135 aaPredicted RBP18.89■□□□□ 0.61
CCDC138-203ENST00000412964 CARD14Q9BXL6 1004 aa18.89■□□□□ 0.61
CCDC138-203ENST00000412964 CPS1P31327 1500 aa18.89■□□□□ 0.61
CCDC138-203ENST00000412964 PUS7Q96PZ0 661 aaKnown RBP18.89■□□□□ 0.61
CCDC138-203ENST00000412964 TECPR2O15040 1411 aa18.88■□□□□ 0.61
CCDC138-203ENST00000412964 HNRNPUQ00839 825 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCDC138-203ENST00000412964 ATAD2Q6PL18 1390 aa18.87■□□□□ 0.61
CCDC138-203ENST00000412964 ROBO2Q9HCK4 1378 aa18.87■□□□□ 0.61
CCDC138-203ENST00000412964 MED14O60244 1454 aa18.87■□□□□ 0.61
CCDC138-203ENST00000412964 NLRP13Q86W25 1043 aa18.87■□□□□ 0.61
CCDC138-203ENST00000412964 TBX22Q9Y458 520 aa18.87■□□□□ 0.61
CCDC138-203ENST00000412964 FAM135BQ49AJ0 1406 aa18.87■□□□□ 0.61
CCDC138-203ENST00000412964 NSD3Q9BZ95 1437 aa18.87■□□□□ 0.61
CCDC138-203ENST00000412964 AMOTL2Q9Y2J4 779 aa18.86■□□□□ 0.61
CCDC138-203ENST00000412964 DIP2AQ14689 1571 aa18.86■□□□□ 0.61
CCDC138-203ENST00000412964 PTPRUQ92729 1446 aa18.85■□□□□ 0.61
CCDC138-203ENST00000412964 BRD4O60885 1362 aaPredicted RBP18.85■□□□□ 0.61
CCDC138-203ENST00000412964 ANKRD36BQ8N2N9 1353 aa18.84■□□□□ 0.61
CCDC138-203ENST00000412964 NINLQ9Y2I6 1382 aa18.83■□□□□ 0.61
CCDC138-203ENST00000412964 SIRT1Q96EB6 747 aa18.83■□□□□ 0.61
CCDC138-203ENST00000412964 WASLO00401 505 aaPredicted RBP18.83■□□□□ 0.6
CCDC138-203ENST00000412964 CABP1Q9NZU7 370 aa18.81■□□□□ 0.6
CCDC138-203ENST00000412964 A0A1W2PP64 1363 aa18.81■□□□□ 0.6
CCDC138-203ENST00000412964 TERF2IPQ9NYB0 399 aa18.81■□□□□ 0.6
CCDC138-203ENST00000412964 NPC1L1Q9UHC9 1359 aa18.81■□□□□ 0.6
CCDC138-203ENST00000412964 CGNL1Q0VF96 1302 aa18.8■□□□□ 0.6
CCDC138-203ENST00000412964 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
CCDC138-203ENST00000412964 PPP2R1AP30153 589 aa18.79■□□□□ 0.6
CCDC138-203ENST00000412964 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.79■□□□□ 0.6
CCDC138-203ENST00000412964 HDGFL2Q7Z4V5 671 aaPredicted RBP18.78■□□□□ 0.6
CCDC138-203ENST00000412964 NUTM2FA1L443 756 aa18.77■□□□□ 0.6
CCDC138-203ENST00000412964 KCNA6P17658 529 aa18.77■□□□□ 0.6
CCDC138-203ENST00000412964 TNNT2P45379 298 aaPredicted RBP18.77■□□□□ 0.6
CCDC138-203ENST00000412964 PTCH1Q13635 1447 aa18.77■□□□□ 0.6
CCDC138-203ENST00000412964 MORC1Q86VD1 984 aa18.76■□□□□ 0.59
CCDC138-203ENST00000412964 NCKAP5LQ9HCH0 1330 aa18.76■□□□□ 0.59
CCDC138-203ENST00000412964 XRN1Q8IZH2 1706 aaKnown RBP18.76■□□□□ 0.59
CCDC138-203ENST00000412964 NPHP4O75161 1426 aaPredicted RBP18.76■□□□□ 0.59
CCDC138-203ENST00000412964 PPIP5K1Q6PFW1 1433 aa18.76■□□□□ 0.59
CCDC138-203ENST00000412964 NUDT16Q96DE0 195 aaKnown RBP18.76■□□□□ 0.59
CCDC138-203ENST00000412964 USP32Q8NFA0 1604 aa18.75■□□□□ 0.59
CCDC138-203ENST00000412964 PIK3R4Q99570 1358 aa18.75■□□□□ 0.59
CCDC138-203ENST00000412964 CD163L1Q9NR16 1453 aa18.75■□□□□ 0.59
CCDC138-203ENST00000412964 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
CCDC138-203ENST00000412964 ADGRB2O60241 1585 aa18.73■□□□□ 0.59
CCDC138-203ENST00000412964 CCDC61Q9Y6R9 512 aa18.73■□□□□ 0.59
CCDC138-203ENST00000412964 CHD2O14647 1828 aaKnown RBP18.72■□□□□ 0.59
CCDC138-203ENST00000412964 KDM4FA0A1W2PPD8 638 aa18.72■□□□□ 0.59
CCDC138-203ENST00000412964 ATP7BP35670 1465 aa18.71■□□□□ 0.59
CCDC138-203ENST00000412964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.71■□□□□ 0.59
CCDC138-203ENST00000412964 GGNBP2Q9H3C7 697 aa18.71■□□□□ 0.59
CCDC138-203ENST00000412964 RBM33Q96EV2 1170 aaKnown RBP18.7■□□□□ 0.58
CCDC138-203ENST00000412964 NSD2O96028 1365 aa18.7■□□□□ 0.58
CCDC138-203ENST00000412964 PRR36Q9H6K5 1346 aa18.7■□□□□ 0.58
CCDC138-203ENST00000412964 HSPA2P54652 639 aa18.69■□□□□ 0.58
CCDC138-203ENST00000412964 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
CCDC138-203ENST00000412964 WDR43Q15061 677 aaKnown RBP eCLIP18.68■□□□□ 0.58
CCDC138-203ENST00000412964 ITSN1Q15811 1721 aa18.68■□□□□ 0.58
CCDC138-203ENST00000412964 CDC42BPGQ6DT37 1551 aa18.66■□□□□ 0.58
CCDC138-203ENST00000412964 KIF20BQ96Q89 1820 aa18.66■□□□□ 0.58
CCDC138-203ENST00000412964 FYB1O15117 783 aa18.66■□□□□ 0.58
CCDC138-203ENST00000412964 ZBED9Q6R2W3 1325 aa18.66■□□□□ 0.58
CCDC138-203ENST00000412964 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
CCDC138-203ENST00000412964 C14orf37Q86TY3 774 aa18.66■□□□□ 0.58
CCDC138-203ENST00000412964 CPSF1Q10570 1443 aaKnown RBP18.64■□□□□ 0.58
CCDC138-203ENST00000412964 RGPD8O14715 1765 aaPredicted RBP18.64■□□□□ 0.57
CCDC138-203ENST00000412964 TOPAZ1Q8N9V7 1692 aa18.64■□□□□ 0.57
CCDC138-203ENST00000412964 ANKRD26Q9UPS8 1709 aa18.64■□□□□ 0.57
CCDC138-203ENST00000412964 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
CCDC138-203ENST00000412964 NALCNQ8IZF0 1738 aa18.63■□□□□ 0.57
CCDC138-203ENST00000412964 AKAP12Q02952 1782 aa18.63■□□□□ 0.57
CCDC138-203ENST00000412964 MON2Q7Z3U7 1717 aa18.62■□□□□ 0.57
CCDC138-203ENST00000412964 EDC4Q6P2E9 1401 aaKnown RBP18.62■□□□□ 0.57
CCDC138-203ENST00000412964 PMFBP1Q8TBY8 1022 aa18.62■□□□□ 0.57
CCDC138-203ENST00000412964 SALL2Q9Y467 1007 aaPredicted RBP18.62■□□□□ 0.57
CCDC138-203ENST00000412964 MTHFSP49914 203 aa18.62■□□□□ 0.57
CCDC138-203ENST00000412964 ACEP12821 1306 aa18.62■□□□□ 0.57
CCDC138-203ENST00000412964 ZNF692Q9BU19 519 aaPredicted RBP18.61■□□□□ 0.57
CCDC138-203ENST00000412964 NKTRP30414 1462 aaKnown RBP18.6■□□□□ 0.57
CCDC138-203ENST00000412964 NME9Q86XW9 330 aa18.6■□□□□ 0.57
CCDC138-203ENST00000412964 CFAP53Q96M91 514 aa18.59■□□□□ 0.57
CCDC138-203ENST00000412964 NGDNQ8NEJ9 315 aaKnown RBP18.58■□□□□ 0.57
CCDC138-203ENST00000412964 LMTK3Q96Q04 1460 aa18.58■□□□□ 0.57
CCDC138-203ENST00000412964 FMN2Q9NZ56 1722 aa18.58■□□□□ 0.57
CCDC138-203ENST00000412964 PLEKHG3A1L390 1219 aa18.58■□□□□ 0.56
CCDC138-203ENST00000412964 POLR3AO14802 1390 aaPredicted RBP18.58■□□□□ 0.56
CCDC138-203ENST00000412964 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
CCDC138-203ENST00000412964 PROSER2Q86WR7 435 aaPredicted RBP18.57■□□□□ 0.56
CCDC138-203ENST00000412964 NWD1Q149M9 1564 aa18.56■□□□□ 0.56
CCDC138-203ENST00000412964 ADGRL3Q9HAR2 1447 aa18.56■□□□□ 0.56
CCDC138-203ENST00000412964 ZRANB1Q9UGI0 708 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms