RNA–Protein interactions for RNA: ENST00000411549.5

ACAA1-203, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 1 (best)

Gene ACAA1, Length 1,944 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-203ENST00000411549 TMF1P82094 1093 aa27.16■■□□□ 1.94
ACAA1-203ENST00000411549 METP08581 1390 aa27.15■■□□□ 1.94
ACAA1-203ENST00000411549 PIK3R4Q99570 1358 aa27.15■■□□□ 1.94
ACAA1-203ENST00000411549 CHD2O14647 1828 aaKnown RBP27.15■■□□□ 1.94
ACAA1-203ENST00000411549 ADGRB1O14514 1584 aa27.15■■□□□ 1.94
ACAA1-203ENST00000411549 IRX6P78412 446 aaPredicted RBP27.11■■□□□ 1.93
ACAA1-203ENST00000411549 TMEM132EQ6IEE7 984 aa27.11■■□□□ 1.93
ACAA1-203ENST00000411549 NLRP13Q86W25 1043 aa27.1■■□□□ 1.93
ACAA1-203ENST00000411549 NWD1Q149M9 1564 aa27.09■■□□□ 1.93
ACAA1-203ENST00000411549 PTPRUQ92729 1446 aa27.09■■□□□ 1.93
ACAA1-203ENST00000411549 XRN1Q8IZH2 1706 aaKnown RBP27.09■■□□□ 1.93
ACAA1-203ENST00000411549 KNDC1Q76NI1 1749 aa27.08■■□□□ 1.93
ACAA1-203ENST00000411549 YTHDC2Q9H6S0 1430 aaKnown RBP27.08■■□□□ 1.93
ACAA1-203ENST00000411549 STRCP1A6NGW2 1772 aa27.07■■□□□ 1.92
ACAA1-203ENST00000411549 NUDCQ9Y266 331 aa27.06■■□□□ 1.92
ACAA1-203ENST00000411549 PANK3Q9H999 370 aa27.06■■□□□ 1.92
ACAA1-203ENST00000411549 KCNA6P17658 529 aa27.05■■□□□ 1.92
ACAA1-203ENST00000411549 AMOTL2Q9Y2J4 779 aa27.04■■□□□ 1.92
ACAA1-203ENST00000411549 ZNF335Q9H4Z2 1342 aaPredicted RBP27.03■■□□□ 1.92
ACAA1-203ENST00000411549 PPP4R2Q9NY27 417 aa27.02■■□□□ 1.92
ACAA1-203ENST00000411549 TECPR2O15040 1411 aa27.02■■□□□ 1.92
ACAA1-203ENST00000411549 ABCC11Q96J66 1382 aa27.02■■□□□ 1.92
ACAA1-203ENST00000411549 CPS1P31327 1500 aa27.01■■□□□ 1.91
ACAA1-203ENST00000411549 NKTRP30414 1462 aaKnown RBP27.01■■□□□ 1.91
ACAA1-203ENST00000411549 STK26Q9P289 416 aa27.01■■□□□ 1.91
ACAA1-203ENST00000411549 RNF123Q5XPI4 1314 aa27■■□□□ 1.91
ACAA1-203ENST00000411549 ARHGEF28Q8N1W1 1705 aaKnown RBP27■■□□□ 1.91
ACAA1-203ENST00000411549 DLC1Q96QB1 1528 aa26.99■■□□□ 1.91
ACAA1-203ENST00000411549 PTCH1Q13635 1447 aa26.99■■□□□ 1.91
ACAA1-203ENST00000411549 INSRP06213 1382 aa26.98■■□□□ 1.91
ACAA1-203ENST00000411549 EIF3AQ14152 1382 aaKnown RBP26.97■■□□□ 1.91
ACAA1-203ENST00000411549 CDCA8Q53HL2 280 aa26.97■■□□□ 1.91
ACAA1-203ENST00000411549 TRAK1Q9UPV9 953 aa26.97■■□□□ 1.91
ACAA1-203ENST00000411549 CC2D1BQ5T0F9 858 aaKnown RBP26.95■■□□□ 1.9
ACAA1-203ENST00000411549 LTBP4Q8N2S1 1624 aa26.95■■□□□ 1.9
ACAA1-203ENST00000411549 ROBO2Q9HCK4 1378 aa26.94■■□□□ 1.9
ACAA1-203ENST00000411549 FAM135BQ49AJ0 1406 aa26.93■■□□□ 1.9
ACAA1-203ENST00000411549 SIRT1Q96EB6 747 aa26.92■■□□□ 1.9
ACAA1-203ENST00000411549 MYOM1P52179 1685 aa26.9■■□□□ 1.9
ACAA1-203ENST00000411549 PROSER2Q86WR7 435 aaPredicted RBP26.89■■□□□ 1.9
ACAA1-203ENST00000411549 LRRC7Q96NW7 1537 aa26.89■■□□□ 1.9
ACAA1-203ENST00000411549 PRAM1Q96QH2 718 aa26.88■■□□□ 1.89
ACAA1-203ENST00000411549 BLMP54132 1417 aaPredicted RBP26.88■■□□□ 1.89
ACAA1-203ENST00000411549 XIRP1Q702N8 1843 aaKnown RBP26.88■■□□□ 1.89
ACAA1-203ENST00000411549 SLC24A1O60721 1099 aa26.87■■□□□ 1.89
ACAA1-203ENST00000411549 WAPLQ7Z5K2 1190 aa26.87■■□□□ 1.89
ACAA1-203ENST00000411549 POGKQ9P215 609 aa26.86■■□□□ 1.89
ACAA1-203ENST00000411549 PLEKHH1Q9ULM0 1364 aa26.86■■□□□ 1.89
ACAA1-203ENST00000411549 QRICH2Q9H0J4 1663 aa26.86■■□□□ 1.89
ACAA1-203ENST00000411549 AMER1Q5JTC6 1135 aaPredicted RBP26.86■■□□□ 1.89
ACAA1-203ENST00000411549 KNSTRNQ9Y448 316 aa26.85■■□□□ 1.89
ACAA1-203ENST00000411549 TMEM94Q12767 1356 aa26.85■■□□□ 1.89
ACAA1-203ENST00000411549 CENPJQ9HC77 1338 aaPredicted RBP26.84■■□□□ 1.89
ACAA1-203ENST00000411549 SENP3-EIF4A1A0A087X0R7 540 aa26.84■■□□□ 1.89
ACAA1-203ENST00000411549 NCOA3Q9Y6Q9 1424 aa26.84■■□□□ 1.89
ACAA1-203ENST00000411549 NPC1L1Q9UHC9 1359 aa26.84■■□□□ 1.89
ACAA1-203ENST00000411549 NALCNQ8IZF0 1738 aa26.84■■□□□ 1.89
ACAA1-203ENST00000411549 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.83■■□□□ 1.89
ACAA1-203ENST00000411549 RBM19Q9Y4C8 960 aaKnown RBP26.83■■□□□ 1.89
ACAA1-203ENST00000411549 PDE3BQ13370 1112 aa26.82■■□□□ 1.88
ACAA1-203ENST00000411549 RBM33Q96EV2 1170 aaKnown RBP26.82■■□□□ 1.88
ACAA1-203ENST00000411549 SBNO2Q9Y2G9 1366 aa26.82■■□□□ 1.88
ACAA1-203ENST00000411549 SAFB2Q14151 953 aaKnown RBP eCLIP26.82■■□□□ 1.88
ACAA1-203ENST00000411549 ADGRL3Q9HAR2 1447 aa26.79■■□□□ 1.88
ACAA1-203ENST00000411549 B4GALNT3Q6L9W6 998 aa26.78■■□□□ 1.88
ACAA1-203ENST00000411549 PPP2R1AP30153 589 aa26.78■■□□□ 1.88
ACAA1-203ENST00000411549 ADGRB2O60241 1585 aa26.78■■□□□ 1.88
ACAA1-203ENST00000411549 C14orf37Q86TY3 774 aa26.77■■□□□ 1.88
ACAA1-203ENST00000411549 MINK1Q8N4C8 1332 aaPredicted RBP26.75■■□□□ 1.87
ACAA1-203ENST00000411549 MSH6P52701 1360 aa26.73■■□□□ 1.87
ACAA1-203ENST00000411549 CDC42BPGQ6DT37 1551 aa26.73■■□□□ 1.87
ACAA1-203ENST00000411549 C19orf44Q9H6X5 657 aa26.73■■□□□ 1.87
ACAA1-203ENST00000411549 IQSEC2Q5JU85 1478 aa26.71■■□□□ 1.87
ACAA1-203ENST00000411549 DCCP43146 1447 aa26.71■■□□□ 1.87
ACAA1-203ENST00000411549 TULP4Q9NRJ4 1543 aa26.68■■□□□ 1.86
ACAA1-203ENST00000411549 SALL2Q9Y467 1007 aaPredicted RBP26.68■■□□□ 1.86
ACAA1-203ENST00000411549 FMN2Q9NZ56 1722 aa26.68■■□□□ 1.86
ACAA1-203ENST00000411549 RRP1P56182 461 aaKnown RBP26.67■■□□□ 1.86
ACAA1-203ENST00000411549 CERKQ8TCT0 537 aa26.67■■□□□ 1.86
ACAA1-203ENST00000411549 RCAN3Q9UKA8 241 aa26.67■■□□□ 1.86
ACAA1-203ENST00000411549 ADAMTS8Q9UP79 889 aa26.67■■□□□ 1.86
ACAA1-203ENST00000411549 EVC2Q86UK5 1308 aa26.65■■□□□ 1.86
ACAA1-203ENST00000411549 WASLO00401 505 aaPredicted RBP26.65■■□□□ 1.86
ACAA1-203ENST00000411549 ATF3P18847 181 aa26.65■■□□□ 1.86
ACAA1-203ENST00000411549 CADPS2Q86UW7 1296 aa26.64■■□□□ 1.86
ACAA1-203ENST00000411549 CDCA7LQ96GN5 454 aa26.64■■□□□ 1.86
ACAA1-203ENST00000411549 CARD14Q9BXL6 1004 aa26.63■■□□□ 1.85
ACAA1-203ENST00000411549 CDK19Q9BWU1 502 aa26.61■■□□□ 1.85
ACAA1-203ENST00000411549 WDR43Q15061 677 aaKnown RBP eCLIP26.61■■□□□ 1.85
ACAA1-203ENST00000411549 USP32Q8NFA0 1604 aa26.59■■□□□ 1.85
ACAA1-203ENST00000411549 SRPK2P78362 688 aaKnown RBP26.59■■□□□ 1.85
ACAA1-203ENST00000411549 CCDC136Q96JN2 1154 aa26.59■■□□□ 1.85
ACAA1-203ENST00000411549 RGPD8O14715 1765 aaPredicted RBP26.59■■□□□ 1.85
ACAA1-203ENST00000411549 MST1RQ04912 1400 aa26.58■■□□□ 1.85
ACAA1-203ENST00000411549 ANKARQ7Z5J8 1434 aa26.57■■□□□ 1.84
ACAA1-203ENST00000411549 ITSN1Q15811 1721 aa26.56■■□□□ 1.84
ACAA1-203ENST00000411549 ATP7BP35670 1465 aa26.56■■□□□ 1.84
ACAA1-203ENST00000411549 NUTM2FA1L443 756 aa26.55■■□□□ 1.84
ACAA1-203ENST00000411549 CABP2Q9NPB3 220 aa26.55■■□□□ 1.84
ACAA1-203ENST00000411549 ZNF521Q96K83 1311 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms