RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 USP17L8P0C7I0 530 aa9.87□□□□□ -0.83
LSM5-206ENST00000409987 GRIPAP1Q4V328 841 aa9.87□□□□□ -0.83
LSM5-206ENST00000409987 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.87□□□□□ -0.83
LSM5-206ENST00000409987 ATP6V1AP38606 617 aa9.86□□□□□ -0.83
LSM5-206ENST00000409987 MTMR2Q13614 643 aa9.86□□□□□ -0.83
LSM5-206ENST00000409987 KMT5BQ4FZB7 885 aa9.86□□□□□ -0.83
LSM5-206ENST00000409987 ANKRD13DQ6ZTN6 518 aa9.86□□□□□ -0.83
LSM5-206ENST00000409987 SOCS7O14512 581 aa9.85□□□□□ -0.83
LSM5-206ENST00000409987 ACTN4O43707 911 aaKnown RBP9.84□□□□□ -0.83
LSM5-206ENST00000409987 CFAP99D6REC4 459 aa9.83□□□□□ -0.84
LSM5-206ENST00000409987 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
LSM5-206ENST00000409987 PUS10Q3MIT2 529 aaKnown RBP9.83□□□□□ -0.84
LSM5-206ENST00000409987 MORN1Q5T089 497 aa9.83□□□□□ -0.84
LSM5-206ENST00000409987 HOMEZQ8IX15 550 aa9.83□□□□□ -0.84
LSM5-206ENST00000409987 ANKK1Q8NFD2 765 aa9.83□□□□□ -0.84
LSM5-206ENST00000409987 NECTIN2Q92692 538 aa9.83□□□□□ -0.84
LSM5-206ENST00000409987 SYMPKQ92797 1274 aaKnown RBP9.83□□□□□ -0.84
LSM5-206ENST00000409987 SOWAHBA6NEL2 793 aa9.82□□□□□ -0.84
LSM5-206ENST00000409987 BCAMP50895 628 aa9.82□□□□□ -0.84
LSM5-206ENST00000409987 CTDSPL2Q05D32 466 aa9.82□□□□□ -0.84
LSM5-206ENST00000409987 GDPD2Q9HCC8 539 aa9.82□□□□□ -0.84
LSM5-206ENST00000409987 GOLGA8CPA6NN73 597 aa9.81□□□□□ -0.84
LSM5-206ENST00000409987 STAC3Q96MF2 364 aa9.81□□□□□ -0.84
LSM5-206ENST00000409987 ARID3AQ99856 593 aa9.81□□□□□ -0.84
LSM5-206ENST00000409987 ZNF777Q9ULD5 760 aaPredicted RBP9.81□□□□□ -0.84
LSM5-206ENST00000409987 HPS5Q9UPZ3 1129 aa9.81□□□□□ -0.84
LSM5-206ENST00000409987 GJD4Q96KN9 370 aaPredicted RBP9.8□□□□□ -0.84
LSM5-206ENST00000409987 HMX1Q9NP08 348 aaPredicted RBP9.8□□□□□ -0.84
LSM5-206ENST00000409987 TBC1D2BQ9UPU7 963 aa9.8□□□□□ -0.84
LSM5-206ENST00000409987 SLC27A5Q9Y2P5 690 aa9.8□□□□□ -0.84
LSM5-206ENST00000409987 APLP1P51693 650 aa9.79□□□□□ -0.84
LSM5-206ENST00000409987 PPP4CP60510 307 aa9.79□□□□□ -0.84
LSM5-206ENST00000409987 HELBQ8NG08 1087 aaPredicted RBP9.79□□□□□ -0.84
LSM5-206ENST00000409987 TSC1Q92574 1164 aa9.79□□□□□ -0.84
LSM5-206ENST00000409987 WNT2BQ93097 391 aa9.79□□□□□ -0.84
LSM5-206ENST00000409987 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
LSM5-206ENST00000409987 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
LSM5-206ENST00000409987 PRR7Q8TB68 274 aa9.78□□□□□ -0.84
LSM5-206ENST00000409987 PRR14Q9BWN1 585 aa9.78□□□□□ -0.84
LSM5-206ENST00000409987 TSR3Q9UJK0 312 aaKnown RBP9.78□□□□□ -0.84
LSM5-206ENST00000409987 ABL2P42684 1182 aa9.77□□□□□ -0.85
LSM5-206ENST00000409987 RETREG3Q86VR2 466 aa9.77□□□□□ -0.85
LSM5-206ENST00000409987 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.85
LSM5-206ENST00000409987 LRRN4Q8WUT4 740 aa9.77□□□□□ -0.85
LSM5-206ENST00000409987 TRIM34Q9BYJ4 488 aa9.77□□□□□ -0.85
LSM5-206ENST00000409987 RNF19BQ6ZMZ0 732 aa9.76□□□□□ -0.85
LSM5-206ENST00000409987 ZNF330Q9Y3S2 320 aaPredicted RBP9.76□□□□□ -0.85
LSM5-206ENST00000409987 GPR37L1O60883 481 aa9.75□□□□□ -0.85
LSM5-206ENST00000409987 Q3C1V9 767 aa9.75□□□□□ -0.85
LSM5-206ENST00000409987 BLOC1S3Q6QNY0 202 aa9.75□□□□□ -0.85
LSM5-206ENST00000409987 PRM3Q9NNZ6 103 aa9.75□□□□□ -0.85
LSM5-206ENST00000409987 NDUFB9Q9Y6M9 179 aa9.75□□□□□ -0.85
LSM5-206ENST00000409987 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
LSM5-206ENST00000409987 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
LSM5-206ENST00000409987 PCDHB3Q9Y5E6 796 aa9.73□□□□□ -0.85
LSM5-206ENST00000409987 IRF5Q13568 498 aa9.72□□□□□ -0.85
LSM5-206ENST00000409987 BRICD5Q6PL45 260 aa9.72□□□□□ -0.85
LSM5-206ENST00000409987 EPS8L1Q8TE68 723 aa9.72□□□□□ -0.85
LSM5-206ENST00000409987 DESI1Q6ICB0 168 aa9.71□□□□□ -0.86
LSM5-206ENST00000409987 WWC1Q8IX03 1113 aa9.71□□□□□ -0.86
LSM5-206ENST00000409987 SCUBE3Q8IX30 993 aa9.71□□□□□ -0.86
LSM5-206ENST00000409987 THAP11Q96EK4 314 aa9.71□□□□□ -0.86
LSM5-206ENST00000409987 SALL2Q9Y467 1007 aaPredicted RBP9.71□□□□□ -0.86
LSM5-206ENST00000409987 POM121CA8CG34 1229 aa9.7□□□□□ -0.86
LSM5-206ENST00000409987 THSD4Q6ZMP0 1018 aa9.7□□□□□ -0.86
LSM5-206ENST00000409987 USB1Q9BQ65 265 aaKnown RBP9.7□□□□□ -0.86
LSM5-206ENST00000409987 NR1I2O75469 434 aa9.69□□□□□ -0.86
LSM5-206ENST00000409987 FMNL1O95466 1100 aaPredicted RBP9.68□□□□□ -0.86
LSM5-206ENST00000409987 NR6A1Q15406 480 aa9.68□□□□□ -0.86
LSM5-206ENST00000409987 LYPD8Q6UX82 237 aa9.67□□□□□ -0.86
LSM5-206ENST00000409987 KCTD12Q96CX2 325 aaKnown RBP9.67□□□□□ -0.86
LSM5-206ENST00000409987 SERPINA10Q9UK55 444 aa9.67□□□□□ -0.86
LSM5-206ENST00000409987 CCDC97Q96F63 343 aaPredicted RBP9.66□□□□□ -0.86
LSM5-206ENST00000409987 JUNDP17535 347 aa9.64□□□□□ -0.87
LSM5-206ENST00000409987 COPS2P61201 443 aa9.64□□□□□ -0.87
LSM5-206ENST00000409987 GLMNQ92990 594 aa9.64□□□□□ -0.87
LSM5-206ENST00000409987 VAC14Q08AM6 782 aa9.63□□□□□ -0.87
LSM5-206ENST00000409987 WASHC4Q2M389 1173 aa9.63□□□□□ -0.87
LSM5-206ENST00000409987 ADAMTS19Q8TE59 1207 aa9.63□□□□□ -0.87
LSM5-206ENST00000409987 FAM160A2Q8N612 972 aaPredicted RBP9.62□□□□□ -0.87
LSM5-206ENST00000409987 CALR3Q96L12 384 aaKnown RBP9.62□□□□□ -0.87
LSM5-206ENST00000409987 F12P00748 615 aaPredicted RBP9.61□□□□□ -0.87
LSM5-206ENST00000409987 MSS51Q4VC12 460 aa9.61□□□□□ -0.87
LSM5-206ENST00000409987 SPSB2Q99619 263 aa9.61□□□□□ -0.87
LSM5-206ENST00000409987 PTPRNQ16849 979 aa9.6□□□□□ -0.87
LSM5-206ENST00000409987 NYAP1Q6ZVC0 841 aa9.6□□□□□ -0.87
LSM5-206ENST00000409987 PRDM9Q9NQV7 894 aa9.6□□□□□ -0.87
LSM5-206ENST00000409987 MAP10Q9P2G4 905 aa9.6□□□□□ -0.87
LSM5-206ENST00000409987 TLL1O43897 1013 aa9.59□□□□□ -0.87
LSM5-206ENST00000409987 DXOO77932 396 aaKnown RBP9.59□□□□□ -0.87
LSM5-206ENST00000409987 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
LSM5-206ENST00000409987 MTRQ99707 1265 aa9.59□□□□□ -0.87
LSM5-206ENST00000409987 MMP16P51512 607 aa9.58□□□□□ -0.88
LSM5-206ENST00000409987 ZPR1O75312 459 aa9.57□□□□□ -0.88
LSM5-206ENST00000409987 PTPN5P54829 565 aa9.57□□□□□ -0.88
LSM5-206ENST00000409987 ALG2Q9H553 416 aa9.57□□□□□ -0.88
LSM5-206ENST00000409987 ADH1BP00325 375 aa9.56□□□□□ -0.88
LSM5-206ENST00000409987 PNMA1Q8ND90 353 aa9.56□□□□□ -0.88
LSM5-206ENST00000409987 FKBPLQ9UIM3 349 aa9.56□□□□□ -0.88
LSM5-206ENST00000409987 CCNYL3P0C7X3 344 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms