RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 TMC1Q8TDI8 760 aa23.89■■□□□ 1.42
LRPPRC-203ENST00000409946 ZNF142P52746 1687 aaPredicted RBP23.89■■□□□ 1.41
LRPPRC-203ENST00000409946 ABCC11Q96J66 1382 aa23.89■■□□□ 1.41
LRPPRC-203ENST00000409946 AMER1Q5JTC6 1135 aaPredicted RBP23.88■■□□□ 1.41
LRPPRC-203ENST00000409946 CARD14Q9BXL6 1004 aa23.88■■□□□ 1.41
LRPPRC-203ENST00000409946 SLC12A5Q9H2X9 1139 aa23.88■■□□□ 1.41
LRPPRC-203ENST00000409946 THEMISQ8N1K5 641 aaPredicted RBP23.87■■□□□ 1.41
LRPPRC-203ENST00000409946 EID1Q9Y6B2 187 aa23.87■■□□□ 1.41
LRPPRC-203ENST00000409946 HNRNPUQ00839 825 aaKnown RBP eCLIP23.86■■□□□ 1.41
LRPPRC-203ENST00000409946 CPS1P31327 1500 aa23.85■■□□□ 1.41
LRPPRC-203ENST00000409946 BRD4O60885 1362 aaPredicted RBP23.85■■□□□ 1.41
LRPPRC-203ENST00000409946 SRPK2P78362 688 aaKnown RBP23.84■■□□□ 1.41
LRPPRC-203ENST00000409946 SETD1BQ9UPS6 1966 aaKnown RBP23.84■■□□□ 1.41
LRPPRC-203ENST00000409946 MED14O60244 1454 aa23.84■■□□□ 1.41
LRPPRC-203ENST00000409946 SLC26A8Q96RN1 970 aa23.83■■□□□ 1.41
LRPPRC-203ENST00000409946 PUS7Q96PZ0 661 aaKnown RBP23.82■■□□□ 1.4
LRPPRC-203ENST00000409946 TECPR2O15040 1411 aa23.82■■□□□ 1.4
LRPPRC-203ENST00000409946 NLRP13Q86W25 1043 aa23.82■■□□□ 1.4
LRPPRC-203ENST00000409946 NSD3Q9BZ95 1437 aa23.82■■□□□ 1.4
LRPPRC-203ENST00000409946 PELP1Q8IZL8 1130 aaKnown RBP23.81■■□□□ 1.4
LRPPRC-203ENST00000409946 PNISRQ8TF01 805 aaKnown RBP23.8■■□□□ 1.4
LRPPRC-203ENST00000409946 PTPRUQ92729 1446 aa23.79■■□□□ 1.4
LRPPRC-203ENST00000409946 CDK19Q9BWU1 502 aa23.79■■□□□ 1.4
LRPPRC-203ENST00000409946 NPC1L1Q9UHC9 1359 aa23.79■■□□□ 1.4
LRPPRC-203ENST00000409946 ROBO2Q9HCK4 1378 aa23.78■■□□□ 1.4
LRPPRC-203ENST00000409946 USP32Q8NFA0 1604 aa23.77■■□□□ 1.4
LRPPRC-203ENST00000409946 FAM135BQ49AJ0 1406 aa23.77■■□□□ 1.4
LRPPRC-203ENST00000409946 ATAD2Q6PL18 1390 aa23.76■■□□□ 1.39
LRPPRC-203ENST00000409946 ANKRD36BQ8N2N9 1353 aa23.76■■□□□ 1.39
LRPPRC-203ENST00000409946 DIP2AQ14689 1571 aa23.76■■□□□ 1.39
LRPPRC-203ENST00000409946 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.75■■□□□ 1.39
LRPPRC-203ENST00000409946 PPP2R1AP30153 589 aa23.75■■□□□ 1.39
LRPPRC-203ENST00000409946 A0A1W2PP64 1363 aa23.73■■□□□ 1.39
LRPPRC-203ENST00000409946 CD163L1Q9NR16 1453 aa23.72■■□□□ 1.39
LRPPRC-203ENST00000409946 SIRT1Q96EB6 747 aa23.72■■□□□ 1.39
LRPPRC-203ENST00000409946 NINLQ9Y2I6 1382 aa23.72■■□□□ 1.39
LRPPRC-203ENST00000409946 TBX22Q9Y458 520 aa23.71■■□□□ 1.39
LRPPRC-203ENST00000409946 XRN1Q8IZH2 1706 aaKnown RBP23.7■■□□□ 1.38
LRPPRC-203ENST00000409946 WASLO00401 505 aaPredicted RBP23.69■■□□□ 1.38
LRPPRC-203ENST00000409946 SENP3-EIF4A1A0A087X0R7 540 aa23.68■■□□□ 1.38
LRPPRC-203ENST00000409946 AMOTL2Q9Y2J4 779 aa23.68■■□□□ 1.38
LRPPRC-203ENST00000409946 ADGRB2O60241 1585 aa23.68■■□□□ 1.38
LRPPRC-203ENST00000409946 CABP1Q9NZU7 370 aa23.67■■□□□ 1.38
LRPPRC-203ENST00000409946 CGNL1Q0VF96 1302 aa23.66■■□□□ 1.38
LRPPRC-203ENST00000409946 ANKLE2Q86XL3 938 aa23.66■■□□□ 1.38
LRPPRC-203ENST00000409946 ANKRD26Q9UPS8 1709 aa23.65■■□□□ 1.38
LRPPRC-203ENST00000409946 KIF20BQ96Q89 1820 aa23.64■■□□□ 1.38
LRPPRC-203ENST00000409946 ZBED9Q6R2W3 1325 aa23.64■■□□□ 1.37
LRPPRC-203ENST00000409946 PTCH1Q13635 1447 aa23.63■■□□□ 1.37
LRPPRC-203ENST00000409946 CHD2O14647 1828 aaKnown RBP23.63■■□□□ 1.37
LRPPRC-203ENST00000409946 TERF2IPQ9NYB0 399 aa23.63■■□□□ 1.37
LRPPRC-203ENST00000409946 NCKAP5LQ9HCH0 1330 aa23.62■■□□□ 1.37
LRPPRC-203ENST00000409946 PPIP5K1Q6PFW1 1433 aa23.62■■□□□ 1.37
LRPPRC-203ENST00000409946 MORC1Q86VD1 984 aa23.62■■□□□ 1.37
LRPPRC-203ENST00000409946 TNNT2P45379 298 aaPredicted RBP23.61■■□□□ 1.37
LRPPRC-203ENST00000409946 ATP7BP35670 1465 aa23.61■■□□□ 1.37
LRPPRC-203ENST00000409946 ITSN1Q15811 1721 aa23.61■■□□□ 1.37
LRPPRC-203ENST00000409946 HDGFL2Q7Z4V5 671 aaPredicted RBP23.6■■□□□ 1.37
LRPPRC-203ENST00000409946 NUDT16Q96DE0 195 aaKnown RBP23.6■■□□□ 1.37
LRPPRC-203ENST00000409946 PRR36Q9H6K5 1346 aa23.6■■□□□ 1.37
LRPPRC-203ENST00000409946 AKAP12Q02952 1782 aa23.6■■□□□ 1.37
LRPPRC-203ENST00000409946 TOPAZ1Q8N9V7 1692 aa23.6■■□□□ 1.37
LRPPRC-203ENST00000409946 NSD2O96028 1365 aa23.58■■□□□ 1.37
LRPPRC-203ENST00000409946 KCNA6P17658 529 aa23.58■■□□□ 1.37
LRPPRC-203ENST00000409946 CDC42BPGQ6DT37 1551 aa23.58■■□□□ 1.37
LRPPRC-203ENST00000409946 MON2Q7Z3U7 1717 aa23.58■■□□□ 1.36
LRPPRC-203ENST00000409946 RGPD8O14715 1765 aaPredicted RBP23.58■■□□□ 1.36
LRPPRC-203ENST00000409946 PIK3R4Q99570 1358 aa23.57■■□□□ 1.36
LRPPRC-203ENST00000409946 NPHP4O75161 1426 aaPredicted RBP23.56■■□□□ 1.36
LRPPRC-203ENST00000409946 NUTM2FA1L443 756 aa23.56■■□□□ 1.36
LRPPRC-203ENST00000409946 GGNBP2Q9H3C7 697 aa23.56■■□□□ 1.36
LRPPRC-203ENST00000409946 BLMP54132 1417 aaPredicted RBP23.55■■□□□ 1.36
LRPPRC-203ENST00000409946 CPSF1Q10570 1443 aaKnown RBP23.54■■□□□ 1.36
LRPPRC-203ENST00000409946 SHPRHQ149N8 1683 aa23.54■■□□□ 1.36
LRPPRC-203ENST00000409946 FYB1O15117 783 aa23.53■■□□□ 1.36
LRPPRC-203ENST00000409946 ADAMTS8Q9UP79 889 aa23.53■■□□□ 1.36
LRPPRC-203ENST00000409946 CCDC61Q9Y6R9 512 aa23.53■■□□□ 1.36
LRPPRC-203ENST00000409946 NALCNQ8IZF0 1738 aa23.52■■□□□ 1.36
LRPPRC-203ENST00000409946 WDR43Q15061 677 aaKnown RBP eCLIP23.52■■□□□ 1.36
LRPPRC-203ENST00000409946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.52■■□□□ 1.367e-8■■■■□ 19.5
LRPPRC-203ENST00000409946 NKTRP30414 1462 aaKnown RBP23.51■■□□□ 1.35
LRPPRC-203ENST00000409946 SUPT16HQ9Y5B9 1047 aaKnown RBP23.51■■□□□ 1.35
LRPPRC-203ENST00000409946 POLR3AO14802 1390 aaPredicted RBP23.49■■□□□ 1.35
LRPPRC-203ENST00000409946 SALL2Q9Y467 1007 aaPredicted RBP23.49■■□□□ 1.35
LRPPRC-203ENST00000409946 INSRP06213 1382 aa23.48■■□□□ 1.35
LRPPRC-203ENST00000409946 FMN2Q9NZ56 1722 aa23.48■■□□□ 1.35
LRPPRC-203ENST00000409946 EDC4Q6P2E9 1401 aaKnown RBP23.48■■□□□ 1.35
LRPPRC-203ENST00000409946 NRKQ7Z2Y5 1582 aa23.47■■□□□ 1.35
LRPPRC-203ENST00000409946 MTHFSP49914 203 aa23.47■■□□□ 1.35
LRPPRC-203ENST00000409946 RBM33Q96EV2 1170 aaKnown RBP23.46■■□□□ 1.35
LRPPRC-203ENST00000409946 KDM4FA0A1W2PPD8 638 aa23.45■■□□□ 1.34
LRPPRC-203ENST00000409946 NME9Q86XW9 330 aa23.43■■□□□ 1.34
LRPPRC-203ENST00000409946 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
LRPPRC-203ENST00000409946 ACEP12821 1306 aa23.42■■□□□ 1.34
LRPPRC-203ENST00000409946 NWD1Q149M9 1564 aa23.42■■□□□ 1.34
LRPPRC-203ENST00000409946 ZRANB1Q9UGI0 708 aa23.42■■□□□ 1.34
LRPPRC-203ENST00000409946 CCDC146Q8IYE0 955 aa23.41■■□□□ 1.34
LRPPRC-203ENST00000409946 PLEKHG3A1L390 1219 aa23.4■■□□□ 1.34
LRPPRC-203ENST00000409946 SMG6Q86US8 1419 aaKnown RBP23.39■■□□□ 1.34
LRPPRC-203ENST00000409946 HSPA2P54652 639 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms