RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 ABCC8Q09428 1581 aa10.54□□□□□ -0.72
LSM5-203ENST00000409782 PRR14Q9BWN1 585 aa10.54□□□□□ -0.72
LSM5-203ENST00000409782 DNMBPQ6XZF7 1577 aa10.53□□□□□ -0.72
LSM5-203ENST00000409782 MS4A1P11836 297 aa10.53□□□□□ -0.72
LSM5-203ENST00000409782 TRIM26Q12899 539 aaPredicted RBP10.53□□□□□ -0.72
LSM5-203ENST00000409782 TOPBP1Q92547 1522 aa10.53□□□□□ -0.72
LSM5-203ENST00000409782 SLC10A3P09131 477 aa10.52□□□□□ -0.73
LSM5-203ENST00000409782 KMT5BQ4FZB7 885 aa10.52□□□□□ -0.73
LSM5-203ENST00000409782 FAM217BQ9NTX9 383 aaPredicted RBP10.52□□□□□ -0.73
LSM5-203ENST00000409782 IFT140Q96RY7 1462 aa10.51□□□□□ -0.73
LSM5-203ENST00000409782 TRAK2O60296 914 aa10.51□□□□□ -0.73
LSM5-203ENST00000409782 CFHP08603 1231 aa10.51□□□□□ -0.73
LSM5-203ENST00000409782 SSTR3P32745 418 aaPredicted RBP10.5□□□□□ -0.73
LSM5-203ENST00000409782 MCM6Q14566 821 aa10.5□□□□□ -0.73
LSM5-203ENST00000409782 REPIN1Q9BWE0 567 aaKnown RBP10.5□□□□□ -0.73
LSM5-203ENST00000409782 ARID3AQ99856 593 aa10.49□□□□□ -0.73
LSM5-203ENST00000409782 CD46P15529 392 aa10.48□□□□□ -0.73
LSM5-203ENST00000409782 APLP1P51693 650 aa10.48□□□□□ -0.73
LSM5-203ENST00000409782 ARID3CA6NKF2 412 aa10.47□□□□□ -0.73
LSM5-203ENST00000409782 GCGRP47871 477 aa10.47□□□□□ -0.73
LSM5-203ENST00000409782 SKIV2LQ15477 1246 aaKnown RBP10.47□□□□□ -0.73
LSM5-203ENST00000409782 HRCP23327 699 aa10.46□□□□□ -0.73
LSM5-203ENST00000409782 RANGAP1P46060 587 aaPredicted RBP10.46□□□□□ -0.73
LSM5-203ENST00000409782 ACTN4O43707 911 aaKnown RBP10.45□□□□□ -0.74
LSM5-203ENST00000409782 POLA1P09884 1462 aaPredicted RBP10.44□□□□□ -0.74
LSM5-203ENST00000409782 PCDHB3Q9Y5E6 796 aa10.44□□□□□ -0.74
LSM5-203ENST00000409782 CLUAP1Q96AJ1 413 aa10.43□□□□□ -0.74
LSM5-203ENST00000409782 TARBP1Q13395 1621 aaKnown RBP10.43□□□□□ -0.74
LSM5-203ENST00000409782 ZNF608Q9ULD9 1512 aaPredicted RBP10.43□□□□□ -0.74
LSM5-203ENST00000409782 GRIPAP1Q4V328 841 aa10.42□□□□□ -0.74
LSM5-203ENST00000409782 NUTM1Q86Y26 1132 aa10.42□□□□□ -0.74
LSM5-203ENST00000409782 CCDC82Q8N4S0 544 aa10.42□□□□□ -0.74
LSM5-203ENST00000409782 BEGAINQ9BUH8 593 aa10.42□□□□□ -0.74
LSM5-203ENST00000409782 EIF4G3O43432 1585 aaKnown RBP10.42□□□□□ -0.74
LSM5-203ENST00000409782 WDR97A6NE52 1622 aa10.41□□□□□ -0.74
LSM5-203ENST00000409782 KDM4AO75164 1064 aa10.41□□□□□ -0.74
LSM5-203ENST00000409782 PDIA4P13667 645 aaKnown RBP10.41□□□□□ -0.74
LSM5-203ENST00000409782 PROSER2Q86WR7 435 aaPredicted RBP10.41□□□□□ -0.74
LSM5-203ENST00000409782 CUX1P39880 1505 aa10.41□□□□□ -0.74
LSM5-203ENST00000409782 ATP6V1AP38606 617 aa10.4□□□□□ -0.74
LSM5-203ENST00000409782 USP46P62068 366 aa10.4□□□□□ -0.74
LSM5-203ENST00000409782 FUT2Q10981 343 aa10.4□□□□□ -0.74
LSM5-203ENST00000409782 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
LSM5-203ENST00000409782 FNBP4Q8N3X1 1017 aaPredicted RBP10.39□□□□□ -0.75
LSM5-203ENST00000409782 DIXDC1Q155Q3 683 aa10.38□□□□□ -0.75
LSM5-203ENST00000409782 MTRQ99707 1265 aa10.38□□□□□ -0.75
LSM5-203ENST00000409782 IL21Q9HBE4 155 aa10.38□□□□□ -0.75
LSM5-203ENST00000409782 ZBTB7CA1YPR0 619 aa10.37□□□□□ -0.75
LSM5-203ENST00000409782 SPDYE5A6NIY4 337 aa10.37□□□□□ -0.75
LSM5-203ENST00000409782 NR1I2O75469 434 aa10.37□□□□□ -0.75
LSM5-203ENST00000409782 COPS2P61201 443 aa10.37□□□□□ -0.75
LSM5-203ENST00000409782 KCNC4Q03721 635 aa10.37□□□□□ -0.75
LSM5-203ENST00000409782 TJAP1Q5JTD0 557 aa10.37□□□□□ -0.75
LSM5-203ENST00000409782 BLOC1S3Q6QNY0 202 aa10.37□□□□□ -0.75
LSM5-203ENST00000409782 ITGBL1O95965 494 aaPredicted RBP10.36□□□□□ -0.75
LSM5-203ENST00000409782 PUS10Q3MIT2 529 aaKnown RBP10.36□□□□□ -0.75
LSM5-203ENST00000409782 BANK1Q8NDB2 785 aa10.36□□□□□ -0.75
LSM5-203ENST00000409782 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.36□□□□□ -0.75
LSM5-203ENST00000409782 SERPINA10Q9UK55 444 aa10.36□□□□□ -0.75
LSM5-203ENST00000409782 SOGA1O94964 1423 aa10.35□□□□□ -0.75
LSM5-203ENST00000409782 RAD21O60216 631 aa10.35□□□□□ -0.75
LSM5-203ENST00000409782 PLA2G2EQ9NZK7 142 aa10.35□□□□□ -0.75
LSM5-203ENST00000409782 RAD54L2Q9Y4B4 1467 aa10.35□□□□□ -0.75
LSM5-203ENST00000409782 SPIRE2Q8WWL2 714 aa10.34□□□□□ -0.75
LSM5-203ENST00000409782 ZPR1O75312 459 aa10.33□□□□□ -0.76
LSM5-203ENST00000409782 MORN1Q5T089 497 aa10.33□□□□□ -0.76
LSM5-203ENST00000409782 SCUBE3Q8IX30 993 aa10.33□□□□□ -0.76
LSM5-203ENST00000409782 TBC1D2Q9BYX2 928 aa10.33□□□□□ -0.76
LSM5-203ENST00000409782 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.768e-7■■■□□ 16.1
LSM5-203ENST00000409782 BIVM-ERCC5R4GMW8 1640 aa10.33□□□□□ -0.76
LSM5-203ENST00000409782 SOCS7O14512 581 aa10.32□□□□□ -0.76
LSM5-203ENST00000409782 HOXA2O43364 376 aa10.32□□□□□ -0.76
LSM5-203ENST00000409782 TRAIPQ9BWF2 469 aa10.32□□□□□ -0.76
LSM5-203ENST00000409782 TOP2BQ02880 1626 aa10.32□□□□□ -0.76
LSM5-203ENST00000409782 Q3C1V9 767 aa10.31□□□□□ -0.76
LSM5-203ENST00000409782 MYSM1Q5VVJ2 828 aa10.31□□□□□ -0.76
LSM5-203ENST00000409782 ZNF516Q92618 1163 aa10.31□□□□□ -0.76
LSM5-203ENST00000409782 SLC27A5Q9Y2P5 690 aa10.31□□□□□ -0.76
LSM5-203ENST00000409782 ABCA10Q8WWZ4 1543 aa10.31□□□□□ -0.76
LSM5-203ENST00000409782 WRNQ14191 1432 aaPredicted RBP eCLIP10.31□□□□□ -0.76
LSM5-203ENST00000409782 CLK2P49760 499 aaKnown RBP10.3□□□□□ -0.76
LSM5-203ENST00000409782 IFFO2Q5TF58 517 aa10.3□□□□□ -0.76
LSM5-203ENST00000409782 CCDC97Q96F63 343 aaPredicted RBP10.3□□□□□ -0.76
LSM5-203ENST00000409782 CCDC9Q9Y3X0 531 aaKnown RBP10.3□□□□□ -0.76
LSM5-203ENST00000409782 GRIN2BQ13224 1484 aa10.3□□□□□ -0.76
LSM5-203ENST00000409782 MAGI1Q96QZ7 1491 aaPredicted RBP10.3□□□□□ -0.76
LSM5-203ENST00000409782 TDRD9Q8NDG6 1382 aaKnown RBP10.29□□□□□ -0.76
LSM5-203ENST00000409782 TUSC1Q2TAM9 212 aa10.29□□□□□ -0.76
LSM5-203ENST00000409782 PROCA1Q8NCQ7 364 aaPredicted RBP10.29□□□□□ -0.76
LSM5-203ENST00000409782 SYNJ1O43426 1573 aa10.29□□□□□ -0.76
LSM5-203ENST00000409782 SNAPC4Q5SXM2 1469 aa10.29□□□□□ -0.76
LSM5-203ENST00000409782 ABCA5Q8WWZ7 1642 aa10.29□□□□□ -0.76
LSM5-203ENST00000409782 CHD1O14646 1710 aa10.28□□□□□ -0.76
LSM5-203ENST00000409782 FDX1P10109 184 aa10.28□□□□□ -0.76
LSM5-203ENST00000409782 PPP2R2DQ66LE6 453 aa10.28□□□□□ -0.76
LSM5-203ENST00000409782 NPM2Q86SE8 214 aaKnown RBP10.28□□□□□ -0.76
LSM5-203ENST00000409782 SALL2Q9Y467 1007 aaPredicted RBP10.28□□□□□ -0.76
LSM5-203ENST00000409782 MOXD2PA6NHM9 499 aa10.27□□□□□ -0.77
LSM5-203ENST00000409782 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.77
LSM5-203ENST00000409782 TMEM259Q4ZIN3 620 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms