RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 GJA5P36382 358 aa7.5□□□□□ -1.21
HMGB1P17-201ENST00000403495 CTDSPL2Q05D32 466 aa7.5□□□□□ -1.21
HMGB1P17-201ENST00000403495 LAPTM4BQ86VI4 370 aa7.5□□□□□ -1.21
HMGB1P17-201ENST00000403495 FNBP4Q8N3X1 1017 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P17-201ENST00000403495 CFAP99D6REC4 459 aa7.49□□□□□ -1.21
HMGB1P17-201ENST00000403495 TK2O00142 265 aa7.49□□□□□ -1.21
HMGB1P17-201ENST00000403495 SLC4A3P48751 1232 aa7.49□□□□□ -1.21
HMGB1P17-201ENST00000403495 BCAMP50895 628 aa7.49□□□□□ -1.21
HMGB1P17-201ENST00000403495 CCDC82Q8N4S0 544 aa7.49□□□□□ -1.21
HMGB1P17-201ENST00000403495 LRCH3Q96II8 777 aa7.49□□□□□ -1.21
HMGB1P17-201ENST00000403495 HMX1Q9NP08 348 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P17-201ENST00000403495 TBC1D2BQ9UPU7 963 aa7.49□□□□□ -1.21
HMGB1P17-201ENST00000403495 HRO43593 1189 aa7.48□□□□□ -1.21
HMGB1P17-201ENST00000403495 ABL2P42684 1182 aa7.48□□□□□ -1.21
HMGB1P17-201ENST00000403495 MTMR2Q13614 643 aa7.48□□□□□ -1.21
HMGB1P17-201ENST00000403495 PRPF38BQ5VTL8 546 aaKnown RBP7.48□□□□□ -1.21
HMGB1P17-201ENST00000403495 LRRN4Q8WUT4 740 aa7.48□□□□□ -1.21
HMGB1P17-201ENST00000403495 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P17-201ENST00000403495 ATP6V1AP38606 617 aa7.47□□□□□ -1.21
HMGB1P17-201ENST00000403495 GJD4Q96KN9 370 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P17-201ENST00000403495 SLC27A5Q9Y2P5 690 aa7.46□□□□□ -1.22
HMGB1P17-201ENST00000403495 GOLGA8CPA6NN73 597 aa7.45□□□□□ -1.22
HMGB1P17-201ENST00000403495 POM121CA8CG34 1229 aa7.45□□□□□ -1.22
HMGB1P17-201ENST00000403495 KMT5BQ4FZB7 885 aa7.45□□□□□ -1.22
HMGB1P17-201ENST00000403495 MORN1Q5T089 497 aa7.45□□□□□ -1.22
HMGB1P17-201ENST00000403495 EPS8L1Q8TE68 723 aa7.45□□□□□ -1.22
HMGB1P17-201ENST00000403495 HPS5Q9UPZ3 1129 aa7.45□□□□□ -1.22
HMGB1P17-201ENST00000403495 ZNF330Q9Y3S2 320 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P17-201ENST00000403495 APLP1P51693 650 aa7.44□□□□□ -1.22
HMGB1P17-201ENST00000403495 MMRN1Q13201 1228 aa7.44□□□□□ -1.22
HMGB1P17-201ENST00000403495 GRIPAP1Q4V328 841 aa7.44□□□□□ -1.22
HMGB1P17-201ENST00000403495 ANKK1Q8NFD2 765 aa7.44□□□□□ -1.22
HMGB1P17-201ENST00000403495 PRR7Q8TB68 274 aa7.44□□□□□ -1.22
HMGB1P17-201ENST00000403495 STAC3Q96MF2 364 aa7.44□□□□□ -1.22
HMGB1P17-201ENST00000403495 PER1O15534 1290 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P17-201ENST00000403495 ACTN4O43707 911 aaKnown RBP7.43□□□□□ -1.22
HMGB1P17-201ENST00000403495 BLOC1S3Q6QNY0 202 aa7.43□□□□□ -1.22
HMGB1P17-201ENST00000403495 RNF19BQ6ZMZ0 732 aa7.43□□□□□ -1.22
HMGB1P17-201ENST00000403495 TRIM34Q9BYJ4 488 aa7.43□□□□□ -1.22
HMGB1P17-201ENST00000403495 SOWAHBA6NEL2 793 aa7.42□□□□□ -1.22
HMGB1P17-201ENST00000403495 PPP4CP60510 307 aa7.42□□□□□ -1.22
HMGB1P17-201ENST00000403495 HELBQ8NG08 1087 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P17-201ENST00000403495 WNT2BQ93097 391 aa7.42□□□□□ -1.22
HMGB1P17-201ENST00000403495 GPR37L1O60883 481 aa7.41□□□□□ -1.22
HMGB1P17-201ENST00000403495 IRF5Q13568 498 aa7.41□□□□□ -1.22
HMGB1P17-201ENST00000403495 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
HMGB1P17-201ENST00000403495 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
HMGB1P17-201ENST00000403495 NR6A1Q15406 480 aa7.4□□□□□ -1.22
HMGB1P17-201ENST00000403495 WBP1LQ9NX94 342 aa7.4□□□□□ -1.22
HMGB1P17-201ENST00000403495 NDUFB9Q9Y6M9 179 aa7.4□□□□□ -1.22
HMGB1P17-201ENST00000403495 RETREG3Q86VR2 466 aa7.39□□□□□ -1.23
HMGB1P17-201ENST00000403495 TSR3Q9UJK0 312 aaKnown RBP7.39□□□□□ -1.23
HMGB1P17-201ENST00000403495 PCDHB3Q9Y5E6 796 aa7.38□□□□□ -1.23
HMGB1P17-201ENST00000403495 COPS2P61201 443 aa7.37□□□□□ -1.23
HMGB1P17-201ENST00000403495 VAC14Q08AM6 782 aa7.37□□□□□ -1.23
HMGB1P17-201ENST00000403495 SCUBE3Q8IX30 993 aa7.37□□□□□ -1.23
HMGB1P17-201ENST00000403495 KCTD12Q96CX2 325 aaKnown RBP7.37□□□□□ -1.23
HMGB1P17-201ENST00000403495 CCDC97Q96F63 343 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P17-201ENST00000403495 PRM3Q9NNZ6 103 aa7.37□□□□□ -1.23
HMGB1P17-201ENST00000403495 Q3C1V9 767 aa7.36□□□□□ -1.23
HMGB1P17-201ENST00000403495 SPNS2Q8IVW8 549 aa7.36□□□□□ -1.23
HMGB1P17-201ENST00000403495 ADAMTS19Q8TE59 1207 aa7.36□□□□□ -1.23
HMGB1P17-201ENST00000403495 GLMNQ92990 594 aa7.36□□□□□ -1.23
HMGB1P17-201ENST00000403495 SOCS7O14512 581 aa7.35□□□□□ -1.23
HMGB1P17-201ENST00000403495 BRICD5Q6PL45 260 aa7.35□□□□□ -1.23
HMGB1P17-201ENST00000403495 THAP11Q96EK4 314 aa7.35□□□□□ -1.23
HMGB1P17-201ENST00000403495 CALR3Q96L12 384 aaKnown RBP7.35□□□□□ -1.23
HMGB1P17-201ENST00000403495 USB1Q9BQ65 265 aaKnown RBP7.35□□□□□ -1.23
HMGB1P17-201ENST00000403495 THSD4Q6ZMP0 1018 aa7.34□□□□□ -1.23
HMGB1P17-201ENST00000403495 WWC1Q8IX03 1113 aa7.34□□□□□ -1.23
HMGB1P17-201ENST00000403495 NECTIN2Q92692 538 aa7.34□□□□□ -1.23
HMGB1P17-201ENST00000403495 PRR14Q9BWN1 585 aa7.34□□□□□ -1.23
HMGB1P17-201ENST00000403495 PRDM9Q9NQV7 894 aa7.34□□□□□ -1.23
HMGB1P17-201ENST00000403495 TLL1O43897 1013 aa7.33□□□□□ -1.24
HMGB1P17-201ENST00000403495 FMNL1O95466 1100 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P17-201ENST00000403495 MAP10Q9P2G4 905 aa7.33□□□□□ -1.24
HMGB1P17-201ENST00000403495 SERPINA10Q9UK55 444 aa7.33□□□□□ -1.24
HMGB1P17-201ENST00000403495 NR1I2O75469 434 aa7.32□□□□□ -1.24
HMGB1P17-201ENST00000403495 HDGFL1Q5TGJ6 251 aa7.32□□□□□ -1.24
HMGB1P17-201ENST00000403495 LYPD8Q6UX82 237 aa7.32□□□□□ -1.24
HMGB1P17-201ENST00000403495 PTPN5P54829 565 aa7.31□□□□□ -1.24
HMGB1P17-201ENST00000403495 FAM160A2Q8N612 972 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P17-201ENST00000403495 JUNDP17535 347 aa7.3□□□□□ -1.24
HMGB1P17-201ENST00000403495 DESI1Q6ICB0 168 aa7.3□□□□□ -1.24
HMGB1P17-201ENST00000403495 RFX1P22670 979 aa7.29□□□□□ -1.24
HMGB1P17-201ENST00000403495 CTHP32929 405 aa7.29□□□□□ -1.24
HMGB1P17-201ENST00000403495 SPSB2Q99619 263 aa7.29□□□□□ -1.24
HMGB1P17-201ENST00000403495 F12P00748 615 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P17-201ENST00000403495 WASHC4Q2M389 1173 aa7.28□□□□□ -1.24
HMGB1P17-201ENST00000403495 ZNF516Q92618 1163 aa7.28□□□□□ -1.24
HMGB1P17-201ENST00000403495 SALL2Q9Y467 1007 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P17-201ENST00000403495 MTRQ99707 1265 aa7.27□□□□□ -1.25
HMGB1P17-201ENST00000403495 FBXO45P0C2W1 286 aa7.26□□□□□ -1.25
HMGB1P17-201ENST00000403495 ALG2Q9H553 416 aa7.26□□□□□ -1.25
HMGB1P17-201ENST00000403495 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P17-201ENST00000403495 ZPR1O75312 459 aa7.25□□□□□ -1.25
HMGB1P17-201ENST00000403495 DXOO77932 396 aaKnown RBP7.25□□□□□ -1.25
HMGB1P17-201ENST00000403495 TRIM26Q12899 539 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P17-201ENST00000403495 PTPRNQ16849 979 aa7.25□□□□□ -1.25
HMGB1P17-201ENST00000403495 MSS51Q4VC12 460 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms