RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 DIP2AQ14689 1571 aa11.71□□□□□ -0.54
LINC02449-202ENST00000399866 MED14O60244 1454 aa11.7□□□□□ -0.54
LINC02449-202ENST00000399866 HNRNPUQ00839 825 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC02449-202ENST00000399866 SAFB2Q14151 953 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC02449-202ENST00000399866 NLRP13Q86W25 1043 aa11.7□□□□□ -0.54
LINC02449-202ENST00000399866 TMC1Q8TDI8 760 aa11.7□□□□□ -0.54
LINC02449-202ENST00000399866 FAM135BQ49AJ0 1406 aa11.69□□□□□ -0.54
LINC02449-202ENST00000399866 NINLQ9Y2I6 1382 aa11.69□□□□□ -0.54
LINC02449-202ENST00000399866 MINK1Q8N4C8 1332 aaPredicted RBP11.69□□□□□ -0.54
LINC02449-202ENST00000399866 LTKP29376 864 aa11.69□□□□□ -0.54
LINC02449-202ENST00000399866 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
LINC02449-202ENST00000399866 ATAD2Q6PL18 1390 aa11.68□□□□□ -0.54
LINC02449-202ENST00000399866 PLEKHH1Q9ULM0 1364 aa11.68□□□□□ -0.54
LINC02449-202ENST00000399866 CARD14Q9BXL6 1004 aa11.68□□□□□ -0.54
LINC02449-202ENST00000399866 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
LINC02449-202ENST00000399866 EID1Q9Y6B2 187 aa11.68□□□□□ -0.54
LINC02449-202ENST00000399866 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
LINC02449-202ENST00000399866 TXNDC2Q86VQ3 553 aa11.67□□□□□ -0.54
LINC02449-202ENST00000399866 PNISRQ8TF01 805 aaKnown RBP11.67□□□□□ -0.54
LINC02449-202ENST00000399866 BCANQ96GW7 911 aa11.67□□□□□ -0.54
LINC02449-202ENST00000399866 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
LINC02449-202ENST00000399866 ADGRB2O60241 1585 aa11.67□□□□□ -0.54
LINC02449-202ENST00000399866 THEMISQ8N1K5 641 aaPredicted RBP11.66□□□□□ -0.54
LINC02449-202ENST00000399866 SIRT1Q96EB6 747 aa11.66□□□□□ -0.54
LINC02449-202ENST00000399866 SLC12A5Q9H2X9 1139 aa11.66□□□□□ -0.54
LINC02449-202ENST00000399866 SRPK2P78362 688 aaKnown RBP11.65□□□□□ -0.54
LINC02449-202ENST00000399866 CD163L1Q9NR16 1453 aa11.64□□□□□ -0.55
LINC02449-202ENST00000399866 ZBED9Q6R2W3 1325 aa11.64□□□□□ -0.55
LINC02449-202ENST00000399866 XRN1Q8IZH2 1706 aaKnown RBP11.64□□□□□ -0.55
LINC02449-202ENST00000399866 PTPRUQ92729 1446 aa11.64□□□□□ -0.55
LINC02449-202ENST00000399866 PPP2R1AP30153 589 aa11.64□□□□□ -0.55
LINC02449-202ENST00000399866 WAPLQ7Z5K2 1190 aa11.64□□□□□ -0.55
LINC02449-202ENST00000399866 A0A1W2PP64 1363 aa11.64□□□□□ -0.55
LINC02449-202ENST00000399866 ROBO2Q9HCK4 1378 aa11.64□□□□□ -0.55
LINC02449-202ENST00000399866 CDK19Q9BWU1 502 aa11.63□□□□□ -0.55
LINC02449-202ENST00000399866 NSD2O96028 1365 aa11.63□□□□□ -0.55
LINC02449-202ENST00000399866 INSRP06213 1382 aa11.63□□□□□ -0.55
LINC02449-202ENST00000399866 ATP7BP35670 1465 aa11.63□□□□□ -0.55
LINC02449-202ENST00000399866 PTCH1Q13635 1447 aa11.62□□□□□ -0.55
LINC02449-202ENST00000399866 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.62□□□□□ -0.55
LINC02449-202ENST00000399866 ANKRD26Q9UPS8 1709 aa11.62□□□□□ -0.55
LINC02449-202ENST00000399866 CGNL1Q0VF96 1302 aa11.61□□□□□ -0.55
LINC02449-202ENST00000399866 BLMP54132 1417 aaPredicted RBP11.61□□□□□ -0.55
LINC02449-202ENST00000399866 TBX22Q9Y458 520 aa11.61□□□□□ -0.55
LINC02449-202ENST00000399866 TOPAZ1Q8N9V7 1692 aa11.6□□□□□ -0.55
LINC02449-202ENST00000399866 CDC42BPGQ6DT37 1551 aa11.6□□□□□ -0.55
LINC02449-202ENST00000399866 SLC26A8Q96RN1 970 aa11.6□□□□□ -0.55
LINC02449-202ENST00000399866 KIF20BQ96Q89 1820 aa11.6□□□□□ -0.55
LINC02449-202ENST00000399866 WASLO00401 505 aaPredicted RBP11.59□□□□□ -0.55
LINC02449-202ENST00000399866 TERF2IPQ9NYB0 399 aa11.59□□□□□ -0.55
LINC02449-202ENST00000399866 PIK3R4Q99570 1358 aa11.58□□□□□ -0.56
LINC02449-202ENST00000399866 HDGFL2Q7Z4V5 671 aaPredicted RBP11.58□□□□□ -0.56
LINC02449-202ENST00000399866 MORC1Q86VD1 984 aa11.58□□□□□ -0.56
LINC02449-202ENST00000399866 PPIP5K1Q6PFW1 1433 aa11.58□□□□□ -0.56
LINC02449-202ENST00000399866 ITSN1Q15811 1721 aa11.57□□□□□ -0.56
LINC02449-202ENST00000399866 MON2Q7Z3U7 1717 aa11.57□□□□□ -0.56
LINC02449-202ENST00000399866 AKAP12Q02952 1782 aa11.56□□□□□ -0.56
LINC02449-202ENST00000399866 SHPRHQ149N8 1683 aa11.56□□□□□ -0.56
LINC02449-202ENST00000399866 ANKLE2Q86XL3 938 aa11.56□□□□□ -0.56
LINC02449-202ENST00000399866 CABP1Q9NZU7 370 aa11.56□□□□□ -0.56
LINC02449-202ENST00000399866 AMOTL2Q9Y2J4 779 aa11.56□□□□□ -0.56
LINC02449-202ENST00000399866 POLR3AO14802 1390 aaPredicted RBP11.55□□□□□ -0.56
LINC02449-202ENST00000399866 CPSF1Q10570 1443 aaKnown RBP11.55□□□□□ -0.56
LINC02449-202ENST00000399866 NRKQ7Z2Y5 1582 aa11.54□□□□□ -0.56
LINC02449-202ENST00000399866 NPHP4O75161 1426 aaPredicted RBP11.54□□□□□ -0.56
LINC02449-202ENST00000399866 EDC4Q6P2E9 1401 aaKnown RBP11.54□□□□□ -0.56
LINC02449-202ENST00000399866 SMG6Q86US8 1419 aaKnown RBP11.54□□□□□ -0.56
LINC02449-202ENST00000399866 WDR43Q15061 677 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC02449-202ENST00000399866 NUDT16Q96DE0 195 aaKnown RBP11.54□□□□□ -0.56
LINC02449-202ENST00000399866 PRR36Q9H6K5 1346 aa11.54□□□□□ -0.56
LINC02449-202ENST00000399866 CHD2O14647 1828 aaKnown RBP11.53□□□□□ -0.56
LINC02449-202ENST00000399866 NKTRP30414 1462 aaKnown RBP11.53□□□□□ -0.56
LINC02449-202ENST00000399866 SETD1BQ9UPS6 1966 aaKnown RBP11.53□□□□□ -0.56
LINC02449-202ENST00000399866 TNNT2P45379 298 aaPredicted RBP11.52□□□□□ -0.57
LINC02449-202ENST00000399866 ADAMTS8Q9UP79 889 aa11.52□□□□□ -0.57
LINC02449-202ENST00000399866 NWD1Q149M9 1564 aa11.52□□□□□ -0.57
LINC02449-202ENST00000399866 NALCNQ8IZF0 1738 aa11.52□□□□□ -0.57
LINC02449-202ENST00000399866 FMN2Q9NZ56 1722 aa11.52□□□□□ -0.57
LINC02449-202ENST00000399866 FYB1O15117 783 aa11.51□□□□□ -0.57
LINC02449-202ENST00000399866 GGNBP2Q9H3C7 697 aa11.51□□□□□ -0.57
LINC02449-202ENST00000399866 CCDC61Q9Y6R9 512 aa11.51□□□□□ -0.57
LINC02449-202ENST00000399866 SENP3-EIF4A1A0A087X0R7 540 aa11.5□□□□□ -0.57
LINC02449-202ENST00000399866 KCNA6P17658 529 aa11.5□□□□□ -0.57
LINC02449-202ENST00000399866 NCKAP5LQ9HCH0 1330 aa11.5□□□□□ -0.57
LINC02449-202ENST00000399866 ANKARQ7Z5J8 1434 aa11.5□□□□□ -0.57
LINC02449-202ENST00000399866 COL3A1P02461 1466 aaPredicted RBP11.5□□□□□ -0.57
LINC02449-202ENST00000399866 CFAP53Q96M91 514 aa11.49□□□□□ -0.57
LINC02449-202ENST00000399866 NUDCQ9Y266 331 aa11.49□□□□□ -0.57
LINC02449-202ENST00000399866 NEFLP07196 543 aa11.48□□□□□ -0.57
LINC02449-202ENST00000399866 MTHFSP49914 203 aa11.48□□□□□ -0.57
LINC02449-202ENST00000399866 SUPT16HQ9Y5B9 1047 aaKnown RBP11.48□□□□□ -0.57
LINC02449-202ENST00000399866 USP6P35125 1406 aa11.47□□□□□ -0.57
LINC02449-202ENST00000399866 PLEKHG3A1L390 1219 aa11.47□□□□□ -0.57
LINC02449-202ENST00000399866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC02449-202ENST00000399866 IQSEC2Q5JU85 1478 aa11.46□□□□□ -0.57
LINC02449-202ENST00000399866 ADGRL3Q9HAR2 1447 aa11.46□□□□□ -0.57
LINC02449-202ENST00000399866 PDE3BQ13370 1112 aa11.46□□□□□ -0.57
LINC02449-202ENST00000399866 ZNF692Q9BU19 519 aaPredicted RBP11.46□□□□□ -0.57
LINC02449-202ENST00000399866 ACEP12821 1306 aa11.45□□□□□ -0.58
LINC02449-202ENST00000399866 NUTM2FA1L443 756 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms