RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 NAP1L1P55209 391 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-216ENST00000399638 NLRP6P59044 892 aa13.3□□□□□ -0.28
CACNA1C-216ENST00000399638 GBP4Q96PP9 640 aa13.3□□□□□ -0.28
CACNA1C-216ENST00000399638 PMFBP1Q8TBY8 1022 aa13.29□□□□□ -0.28
CACNA1C-216ENST00000399638 SCLT1Q96NL6 688 aa13.29□□□□□ -0.28
CACNA1C-216ENST00000399638 NGLY1Q96IV0 654 aa13.29□□□□□ -0.28
CACNA1C-216ENST00000399638 CNNM1Q9NRU3 951 aa13.29□□□□□ -0.28
CACNA1C-216ENST00000399638 SLC3A2P08195 630 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-216ENST00000399638 TMOD2Q9NZR1 351 aa13.29□□□□□ -0.28
CACNA1C-216ENST00000399638 STK11IPQ8N1F8 1099 aa13.29□□□□□ -0.28
CACNA1C-216ENST00000399638 RALBP1Q15311 655 aa13.29□□□□□ -0.28
CACNA1C-216ENST00000399638 NEBLO76041 1014 aa13.28□□□□□ -0.28
CACNA1C-216ENST00000399638 ANKRD20A12PQ8NF67 263 aa13.28□□□□□ -0.28
CACNA1C-216ENST00000399638 CRBNQ96SW2 442 aa13.28□□□□□ -0.28
CACNA1C-216ENST00000399638 UACAQ9BZF9 1416 aa13.28□□□□□ -0.28
CACNA1C-216ENST00000399638 HSP90AB3PQ58FF7 597 aa13.28□□□□□ -0.28
CACNA1C-216ENST00000399638 BRMS1Q9HCU9 246 aa13.28□□□□□ -0.28
CACNA1C-216ENST00000399638 TSPYL4Q9UJ04 414 aa13.28□□□□□ -0.28
CACNA1C-216ENST00000399638 PHLDB1Q86UU1 1377 aa13.28□□□□□ -0.28
CACNA1C-216ENST00000399638 TATP17735 454 aaPredicted RBP13.27□□□□□ -0.28
CACNA1C-216ENST00000399638 CABP4P57796 275 aa13.27□□□□□ -0.28
CACNA1C-216ENST00000399638 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.29
CACNA1C-216ENST00000399638 PTPRGP23470 1445 aa13.27□□□□□ -0.29
CACNA1C-216ENST00000399638 ANKRD62A6NC57 917 aa13.27□□□□□ -0.29
CACNA1C-216ENST00000399638 GNL3LQ9NVN8 582 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-216ENST00000399638 TBC1D2BQ9UPU7 963 aa13.26□□□□□ -0.29
CACNA1C-216ENST00000399638 MPHOSPH9Q99550 1183 aa13.26□□□□□ -0.29
CACNA1C-216ENST00000399638 KRT18P05783 430 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-216ENST00000399638 HMGB2P26583 209 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-216ENST00000399638 MAPK8IP2Q13387 824 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-216ENST00000399638 CCDC70Q6NSX1 233 aa13.26□□□□□ -0.29
CACNA1C-216ENST00000399638 CDK5RAP3Q96JB5 506 aa13.26□□□□□ -0.29
CACNA1C-216ENST00000399638 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
CACNA1C-216ENST00000399638 SAFBQ15424 915 aaKnown RBP eCLIP13.25□□□□□ -0.29
CACNA1C-216ENST00000399638 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
CACNA1C-216ENST00000399638 RUFY2Q8WXA3 655 aa13.25□□□□□ -0.29
CACNA1C-216ENST00000399638 IPO7O95373 1038 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-216ENST00000399638 RSPH4AQ5TD94 716 aa13.25□□□□□ -0.29
CACNA1C-216ENST00000399638 RALYLQ86SE5 291 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-216ENST00000399638 VTI1AQ96AJ9 217 aa13.24□□□□□ -0.29
CACNA1C-216ENST00000399638 SMG6Q86US8 1419 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-216ENST00000399638 HOMER1Q86YM7 354 aa13.24□□□□□ -0.29
CACNA1C-216ENST00000399638 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
CACNA1C-216ENST00000399638 ST18O60284 1047 aa13.24□□□□□ -0.29
CACNA1C-216ENST00000399638 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
CACNA1C-216ENST00000399638 CENPJQ9HC77 1338 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-216ENST00000399638 ANKRD45Q5TZF3 282 aa13.23□□□□□ -0.29
CACNA1C-216ENST00000399638 HOOK1Q9UJC3 728 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-216ENST00000399638 ZPR1O75312 459 aa13.22□□□□□ -0.29
CACNA1C-216ENST00000399638 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-216ENST00000399638 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-216ENST00000399638 THEMISQ8N1K5 641 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-216ENST00000399638 DRC1Q96MC2 740 aa13.22□□□□□ -0.29
CACNA1C-216ENST00000399638 RUSC2Q8N2Y8 1516 aa13.22□□□□□ -0.29
CACNA1C-216ENST00000399638 GOLGA6L19H0YKK7 550 aa13.22□□□□□ -0.29
CACNA1C-216ENST00000399638 RFX1P22670 979 aa13.22□□□□□ -0.29
CACNA1C-216ENST00000399638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.22□□□□□ -0.29
CACNA1C-216ENST00000399638 SYCP1Q15431 976 aa13.22□□□□□ -0.29
CACNA1C-216ENST00000399638 OFD1O75665 1012 aa13.21□□□□□ -0.29
CACNA1C-216ENST00000399638 TTC39AQ5SRH9 613 aa13.21□□□□□ -0.29
CACNA1C-216ENST00000399638 TTLL5Q6EMB2 1281 aa13.21□□□□□ -0.29
CACNA1C-216ENST00000399638 XBP1P17861 261 aa13.21□□□□□ -0.29
CACNA1C-216ENST00000399638 GSE1Q14687 1217 aa13.21□□□□□ -0.3
CACNA1C-216ENST00000399638 DIAPH1O60610 1272 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 HMOX1P09601 288 aa13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 NLRP13Q86W25 1043 aa13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 PRKRIP1Q9H875 184 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 RDXP35241 583 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 BCL2L13Q9BXK5 485 aa13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 PDCL3Q9H2J4 239 aa13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 BECN2A8MW95 431 aa13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 L3MBTL2Q969R5 705 aa13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 CNTLNQ9NXG0 1405 aa13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 ZKSCAN1P17029 563 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 BEGAINQ9BUH8 593 aa13.2□□□□□ -0.3
CACNA1C-216ENST00000399638 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
CACNA1C-216ENST00000399638 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
CACNA1C-216ENST00000399638 TRIM21P19474 475 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-216ENST00000399638 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-216ENST00000399638 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-216ENST00000399638 MPHOSPH8Q99549 860 aa13.19□□□□□ -0.3
CACNA1C-216ENST00000399638 SART3Q15020 963 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-216ENST00000399638 DNAJC2Q99543 621 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-216ENST00000399638 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
CACNA1C-216ENST00000399638 ZNF76P36508 570 aa13.18□□□□□ -0.3
CACNA1C-216ENST00000399638 PUS7Q96PZ0 661 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-216ENST00000399638 MAP3K1Q13233 1512 aa13.17□□□□□ -0.3
CACNA1C-216ENST00000399638 HSP90AB4PQ58FF6 505 aa13.17□□□□□ -0.3
CACNA1C-216ENST00000399638 WWC3Q9ULE0 1092 aa13.17□□□□□ -0.3
CACNA1C-216ENST00000399638 RNF20Q5VTR2 975 aa13.17□□□□□ -0.3
CACNA1C-216ENST00000399638 TTC16Q8NEE8 873 aa13.17□□□□□ -0.3
CACNA1C-216ENST00000399638 PHF14O94880 888 aa13.17□□□□□ -0.3
CACNA1C-216ENST00000399638 CCDC144AA2RUR9 1427 aa13.16□□□□□ -0.3
CACNA1C-216ENST00000399638 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
CACNA1C-216ENST00000399638 RUFY1Q96T51 708 aa13.16□□□□□ -0.3
CACNA1C-216ENST00000399638 HSP90AA2PQ14568 343 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-216ENST00000399638 ZNF622Q969S3 477 aaKnown RBP eCLIP13.15□□□□□ -0.3
CACNA1C-216ENST00000399638 CUX1P39880 1505 aa13.15□□□□□ -0.3
CACNA1C-216ENST00000399638 KIF15Q9NS87 1388 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms