RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 CNNM1Q9NRU3 951 aa16.94■□□□□ 0.3
CACNA1C-211ENST00000399617 GRM1Q13255 1194 aa16.94■□□□□ 0.3
CACNA1C-211ENST00000399617 SIL1Q9H173 461 aa16.93■□□□□ 0.3
CACNA1C-211ENST00000399617 TRDNQ13061 729 aa16.93■□□□□ 0.3
CACNA1C-211ENST00000399617 CCDC34Q96HJ3 373 aa16.93■□□□□ 0.3
CACNA1C-211ENST00000399617 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
CACNA1C-211ENST00000399617 EXOC6Q8TAG9 804 aa16.92■□□□□ 0.3
CACNA1C-211ENST00000399617 CDK19Q9BWU1 502 aa16.92■□□□□ 0.3
CACNA1C-211ENST00000399617 ST18O60284 1047 aa16.91■□□□□ 0.3
CACNA1C-211ENST00000399617 TIMELESSQ9UNS1 1208 aa16.91■□□□□ 0.3
CACNA1C-211ENST00000399617 RRS1Q15050 365 aaKnown RBP16.9■□□□□ 0.3
CACNA1C-211ENST00000399617 SCAPERQ9BY12 1400 aa16.9■□□□□ 0.3
CACNA1C-211ENST00000399617 C1orf115Q9H7X2 142 aa16.89■□□□□ 0.29
CACNA1C-211ENST00000399617 CABP1Q9NZU7 370 aa16.89■□□□□ 0.29
CACNA1C-211ENST00000399617 MAP4K4O95819 1239 aaPredicted RBP16.89■□□□□ 0.29
CACNA1C-211ENST00000399617 ATP2B1P20020 1258 aa16.89■□□□□ 0.29
CACNA1C-211ENST00000399617 ECM2O94769 699 aaPredicted RBP16.89■□□□□ 0.29
CACNA1C-211ENST00000399617 ZSCAN29Q8IWY8 852 aaPredicted RBP16.89■□□□□ 0.29
CACNA1C-211ENST00000399617 PLEKHO1Q53GL0 409 aaPredicted RBP16.88■□□□□ 0.29
CACNA1C-211ENST00000399617 CCAR2Q8N163 923 aaKnown RBP16.88■□□□□ 0.29
CACNA1C-211ENST00000399617 NGLY1Q96IV0 654 aa16.88■□□□□ 0.29
CACNA1C-211ENST00000399617 PHF14O94880 888 aa16.87■□□□□ 0.29
CACNA1C-211ENST00000399617 USHBP1Q8N6Y0 703 aa16.87■□□□□ 0.29
CACNA1C-211ENST00000399617 MTHFSP49914 203 aa16.87■□□□□ 0.29
CACNA1C-211ENST00000399617 UBTFL1P0CB47 393 aaPredicted RBP16.86■□□□□ 0.29
CACNA1C-211ENST00000399617 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
CACNA1C-211ENST00000399617 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
CACNA1C-211ENST00000399617 E9PSI1 815 aa16.85■□□□□ 0.29
CACNA1C-211ENST00000399617 SULT6B1Q6IMI4 303 aa16.85■□□□□ 0.29
CACNA1C-211ENST00000399617 LNPKQ9C0E8 428 aa16.85■□□□□ 0.29
CACNA1C-211ENST00000399617 LRRFIP1Q32MZ4 808 aaKnown RBP16.85■□□□□ 0.29
CACNA1C-211ENST00000399617 TTC39AQ5SRH9 613 aa16.85■□□□□ 0.29
CACNA1C-211ENST00000399617 PIBF1Q8WXW3 757 aa16.85■□□□□ 0.29
CACNA1C-211ENST00000399617 PTCD1O75127 700 aaKnown RBP16.85■□□□□ 0.29
CACNA1C-211ENST00000399617 SYAP1Q96A49 352 aaPredicted RBP16.85■□□□□ 0.29
CACNA1C-211ENST00000399617 TPM3P06753 285 aa16.84■□□□□ 0.29
CACNA1C-211ENST00000399617 ZNF530Q6P9A1 599 aaPredicted RBP16.84■□□□□ 0.29
CACNA1C-211ENST00000399617 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
CACNA1C-211ENST00000399617 VPS37CA5D8V6 355 aaPredicted RBP16.84■□□□□ 0.29
CACNA1C-211ENST00000399617 TTLL12Q14166 644 aaPredicted RBP16.83■□□□□ 0.29
CACNA1C-211ENST00000399617 PANK1Q8TE04 598 aa16.83■□□□□ 0.29
CACNA1C-211ENST00000399617 KIF3AQ9Y496 699 aa16.83■□□□□ 0.28
CACNA1C-211ENST00000399617 RUNDC1Q96C34 613 aa16.83■□□□□ 0.28
CACNA1C-211ENST00000399617 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.83■□□□□ 0.281e-7■■■■■ 115.4
CACNA1C-211ENST00000399617 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
CACNA1C-211ENST00000399617 MIS18AQ9NYP9 233 aa16.82■□□□□ 0.28
CACNA1C-211ENST00000399617 DZIP1LQ8IYY4 767 aaKnown RBP16.82■□□□□ 0.28
CACNA1C-211ENST00000399617 RUFY2Q8WXA3 655 aa16.82■□□□□ 0.28
CACNA1C-211ENST00000399617 FSD1Q9BTV5 496 aa16.82■□□□□ 0.28
CACNA1C-211ENST00000399617 SLC12A5Q9H2X9 1139 aa16.82■□□□□ 0.28
CACNA1C-211ENST00000399617 RBM19Q9Y4C8 960 aaKnown RBP16.82■□□□□ 0.28
CACNA1C-211ENST00000399617 ZKSCAN1P17029 563 aaPredicted RBP16.81■□□□□ 0.28
CACNA1C-211ENST00000399617 TPM2P07951 284 aa16.81■□□□□ 0.28
CACNA1C-211ENST00000399617 CSPP1Q1MSJ5 1256 aa16.81■□□□□ 0.28
CACNA1C-211ENST00000399617 R3HCC1Q9Y3T6 440 aaKnown RBP16.81■□□□□ 0.28
CACNA1C-211ENST00000399617 RALYLQ86SE5 291 aaKnown RBP16.81■□□□□ 0.28
CACNA1C-211ENST00000399617 WAPLQ7Z5K2 1190 aa16.81■□□□□ 0.28
CACNA1C-211ENST00000399617 PAF1Q8N7H5 531 aa16.81■□□□□ 0.28
CACNA1C-211ENST00000399617 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
CACNA1C-211ENST00000399617 NBPF1Q3BBV0 1214 aa16.81■□□□□ 0.28
CACNA1C-211ENST00000399617 IGF1RP08069 1367 aa16.8■□□□□ 0.28
CACNA1C-211ENST00000399617 GNAI1P63096 354 aa16.8■□□□□ 0.28
CACNA1C-211ENST00000399617 TSR1Q2NL82 804 aaKnown RBP16.8■□□□□ 0.28
CACNA1C-211ENST00000399617 ZFYVE27Q5T4F4 411 aa16.8■□□□□ 0.28
CACNA1C-211ENST00000399617 SURF6O75683 361 aaKnown RBP16.8■□□□□ 0.28
CACNA1C-211ENST00000399617 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
CACNA1C-211ENST00000399617 API5Q9BZZ5 524 aaKnown RBP16.79■□□□□ 0.28
CACNA1C-211ENST00000399617 MIA2Q96PC5 1412 aa16.79■□□□□ 0.28
CACNA1C-211ENST00000399617 TSR2Q969E8 191 aaKnown RBP16.78■□□□□ 0.28
CACNA1C-211ENST00000399617 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
CACNA1C-211ENST00000399617 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
CACNA1C-211ENST00000399617 BICD2Q8TD16 824 aa16.78■□□□□ 0.28
CACNA1C-211ENST00000399617 TBC1D2BQ9UPU7 963 aa16.78■□□□□ 0.28
CACNA1C-211ENST00000399617 WASHC2AQ641Q2 1341 aa16.77■□□□□ 0.28
CACNA1C-211ENST00000399617 MPHOSPH8Q99549 860 aa16.77■□□□□ 0.27
CACNA1C-211ENST00000399617 BECN2A8MW95 431 aa16.77■□□□□ 0.27
CACNA1C-211ENST00000399617 MPHOSPH10O00566 681 aaKnown RBP16.77■□□□□ 0.27
CACNA1C-211ENST00000399617 NAP1L1P55209 391 aaKnown RBP16.76■□□□□ 0.27
CACNA1C-211ENST00000399617 FOXO3O43524 673 aa16.75■□□□□ 0.27
CACNA1C-211ENST00000399617 UBAP1LF5GYI3 381 aa16.75■□□□□ 0.27
CACNA1C-211ENST00000399617 CCDC30Q5VVM6 783 aa16.75■□□□□ 0.27
CACNA1C-211ENST00000399617 GOLGA6L19H0YKK7 550 aa16.75■□□□□ 0.27
CACNA1C-211ENST00000399617 FKBP4Q02790 459 aaKnown RBP eCLIP16.75■□□□□ 0.27
CACNA1C-211ENST00000399617 BTBD11A6QL63 1104 aa16.74■□□□□ 0.27
CACNA1C-211ENST00000399617 WDR78Q5VTH9 848 aa16.74■□□□□ 0.27
CACNA1C-211ENST00000399617 ZNF592Q92610 1267 aa16.74■□□□□ 0.27
CACNA1C-211ENST00000399617 PHLDB1Q86UU1 1377 aa16.74■□□□□ 0.27
CACNA1C-211ENST00000399617 GAS2L2Q8NHY3 880 aa16.74■□□□□ 0.27
CACNA1C-211ENST00000399617 DDX19BQ9UMR2 479 aa16.74■□□□□ 0.27
CACNA1C-211ENST00000399617 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
CACNA1C-211ENST00000399617 DEKP35659 375 aaKnown RBP16.74■□□□□ 0.27
CACNA1C-211ENST00000399617 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
CACNA1C-211ENST00000399617 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
CACNA1C-211ENST00000399617 FBXO31Q5XUX0 539 aaPredicted RBP16.74■□□□□ 0.27
CACNA1C-211ENST00000399617 SLC4A8Q2Y0W8 1093 aa16.73■□□□□ 0.27
CACNA1C-211ENST00000399617 CCDC47Q96A33 483 aaKnown RBP16.73■□□□□ 0.27
CACNA1C-211ENST00000399617 PRKRIP1Q9H875 184 aaPredicted RBP16.73■□□□□ 0.27
CACNA1C-211ENST00000399617 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
CACNA1C-211ENST00000399617 RRP1P56182 461 aaKnown RBP16.73■□□□□ 0.27
CACNA1C-211ENST00000399617 ZHX3Q9H4I2 956 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms