RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 SLC4A3P48751 1232 aa19.77■□□□□ 0.75
PCDHA12-201ENST00000398631 LNPKQ9C0E8 428 aa19.77■□□□□ 0.75
PCDHA12-201ENST00000398631 GOLGA6L19H0YKK7 550 aa19.76■□□□□ 0.75
PCDHA12-201ENST00000398631 UBTFL1P0CB47 393 aaPredicted RBP19.76■□□□□ 0.75
PCDHA12-201ENST00000398631 INTS3Q68E01 1043 aaKnown RBP19.76■□□□□ 0.75
PCDHA12-201ENST00000398631 RAD21O60216 631 aa19.76■□□□□ 0.75
PCDHA12-201ENST00000398631 SCAPERQ9BY12 1400 aa19.75■□□□□ 0.75
PCDHA12-201ENST00000398631 WASHC2AQ641Q2 1341 aa19.75■□□□□ 0.75
PCDHA12-201ENST00000398631 C9orf84Q5VXU9 1444 aa19.75■□□□□ 0.75
PCDHA12-201ENST00000398631 NESP48681 1621 aa19.75■□□□□ 0.75
PCDHA12-201ENST00000398631 CTDP1Q9Y5B0 961 aaPredicted RBP19.74■□□□□ 0.75
PCDHA12-201ENST00000398631 TROQ12816 1431 aaPredicted RBP19.74■□□□□ 0.75
PCDHA12-201ENST00000398631 PLEKHO1Q53GL0 409 aaPredicted RBP19.74■□□□□ 0.75
PCDHA12-201ENST00000398631 RBM33Q96EV2 1170 aaKnown RBP19.74■□□□□ 0.75
PCDHA12-201ENST00000398631 NEUROD6Q96NK8 337 aa19.74■□□□□ 0.75
PCDHA12-201ENST00000398631 TSR1Q2NL82 804 aaKnown RBP19.73■□□□□ 0.75
PCDHA12-201ENST00000398631 DHX16O60231 1041 aaKnown RBP19.73■□□□□ 0.75
PCDHA12-201ENST00000398631 PRKAR2BP31323 418 aa19.73■□□□□ 0.75
PCDHA12-201ENST00000398631 EFCAB5A4FU69 1503 aa19.73■□□□□ 0.75
PCDHA12-201ENST00000398631 NBPF1Q3BBV0 1214 aa19.73■□□□□ 0.75
PCDHA12-201ENST00000398631 PPP2R1AP30153 589 aa19.72■□□□□ 0.75
PCDHA12-201ENST00000398631 PANK1Q8TE04 598 aa19.72■□□□□ 0.75
PCDHA12-201ENST00000398631 GNAI3P08754 354 aa19.72■□□□□ 0.75
PCDHA12-201ENST00000398631 CCDC30Q5VVM6 783 aa19.72■□□□□ 0.75
PCDHA12-201ENST00000398631 ERICH2A1L162 156 aa19.71■□□□□ 0.75
PCDHA12-201ENST00000398631 FBXW7Q969H0 707 aa19.71■□□□□ 0.75
PCDHA12-201ENST00000398631 TCEAL9Q9UHQ7 104 aa19.7■□□□□ 0.74
PCDHA12-201ENST00000398631 KIAA1107Q9UPP5 1409 aa19.7■□□□□ 0.74
PCDHA12-201ENST00000398631 NFXL1Q6ZNB6 911 aa19.7■□□□□ 0.74
PCDHA12-201ENST00000398631 ZNF692Q9BU19 519 aaPredicted RBP19.7■□□□□ 0.74
PCDHA12-201ENST00000398631 TOPBP1Q92547 1522 aa19.7■□□□□ 0.74
PCDHA12-201ENST00000398631 TPM1P09493 284 aa19.69■□□□□ 0.74
PCDHA12-201ENST00000398631 TPM2P07951 284 aa19.69■□□□□ 0.74
PCDHA12-201ENST00000398631 SLC12A5Q9H2X9 1139 aa19.69■□□□□ 0.74
PCDHA12-201ENST00000398631 RALYLQ86SE5 291 aaKnown RBP19.69■□□□□ 0.74
PCDHA12-201ENST00000398631 CCDC47Q96A33 483 aaKnown RBP19.69■□□□□ 0.74
PCDHA12-201ENST00000398631 PDE4CQ08493 712 aa19.68■□□□□ 0.74
PCDHA12-201ENST00000398631 CLASRPQ8N2M8 674 aaKnown RBP19.68■□□□□ 0.74
PCDHA12-201ENST00000398631 CHMP5Q9NZZ3 219 aa19.68■□□□□ 0.74
PCDHA12-201ENST00000398631 EHBP1L1Q8N3D4 1523 aa19.68■□□□□ 0.74
PCDHA12-201ENST00000398631 SYNJ1O43426 1573 aa19.67■□□□□ 0.74
PCDHA12-201ENST00000398631 WASHC4Q2M389 1173 aa19.67■□□□□ 0.74
PCDHA12-201ENST00000398631 SMC3Q9UQE7 1217 aa19.67■□□□□ 0.74
PCDHA12-201ENST00000398631 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.67■□□□□ 0.74
PCDHA12-201ENST00000398631 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
PCDHA12-201ENST00000398631 CDK19Q9BWU1 502 aa19.66■□□□□ 0.74
PCDHA12-201ENST00000398631 VPS37CA5D8V6 355 aaPredicted RBP19.66■□□□□ 0.74
PCDHA12-201ENST00000398631 PRXQ9BXM0 1461 aa19.66■□□□□ 0.74
PCDHA12-201ENST00000398631 RAPGEF3O95398 923 aa19.66■□□□□ 0.74
PCDHA12-201ENST00000398631 TATP17735 454 aaPredicted RBP19.66■□□□□ 0.74
PCDHA12-201ENST00000398631 BICD2Q8TD16 824 aa19.66■□□□□ 0.74
PCDHA12-201ENST00000398631 CABP1Q9NZU7 370 aa19.65■□□□□ 0.74
PCDHA12-201ENST00000398631 SMG6Q86US8 1419 aaKnown RBP19.65■□□□□ 0.74
PCDHA12-201ENST00000398631 A0A0U1RQG5 324 aaPredicted RBP19.65■□□□□ 0.74
PCDHA12-201ENST00000398631 GOLGA6L1Q8N7Z2 621 aa19.65■□□□□ 0.74
PCDHA12-201ENST00000398631 CDC45O75419 566 aa19.65■□□□□ 0.74
PCDHA12-201ENST00000398631 SURF6O75683 361 aaKnown RBP19.65■□□□□ 0.74
PCDHA12-201ENST00000398631 EXOSC9Q06265 439 aaKnown RBP19.65■□□□□ 0.74
PCDHA12-201ENST00000398631 TWISTNBQ3B726 338 aaPredicted RBP19.64■□□□□ 0.74
PCDHA12-201ENST00000398631 SAFBQ15424 915 aaKnown RBP eCLIP19.64■□□□□ 0.73
PCDHA12-201ENST00000398631 SNAPC4Q5SXM2 1469 aa19.64■□□□□ 0.73
PCDHA12-201ENST00000398631 NUCB2P80303 420 aa19.64■□□□□ 0.73
PCDHA12-201ENST00000398631 C22orf23Q9BZE7 217 aa19.64■□□□□ 0.73
PCDHA12-201ENST00000398631 FANCIQ9NVI1 1328 aa19.63■□□□□ 0.73
PCDHA12-201ENST00000398631 HOOK1Q9UJC3 728 aaKnown RBP19.63■□□□□ 0.73
PCDHA12-201ENST00000398631 RPGRIP1LQ68CZ1 1315 aa19.63■□□□□ 0.73
PCDHA12-201ENST00000398631 ANKRD20A12PQ8NF67 263 aa19.63■□□□□ 0.73
PCDHA12-201ENST00000398631 STRN4Q9NRL3 753 aa19.63■□□□□ 0.73
PCDHA12-201ENST00000398631 SULT6B1Q6IMI4 303 aa19.62■□□□□ 0.73
PCDHA12-201ENST00000398631 ANKLE2Q86XL3 938 aa19.62■□□□□ 0.73
PCDHA12-201ENST00000398631 ARID3AQ99856 593 aa19.62■□□□□ 0.73
PCDHA12-201ENST00000398631 RBM42Q9BTD8 480 aaKnown RBP19.62■□□□□ 0.73
PCDHA12-201ENST00000398631 WWC1Q8IX03 1113 aa19.62■□□□□ 0.73
PCDHA12-201ENST00000398631 CDCA7LQ96GN5 454 aa19.62■□□□□ 0.73
PCDHA12-201ENST00000398631 NINLQ9Y2I6 1382 aa19.62■□□□□ 0.73
PCDHA12-201ENST00000398631 CCDC27Q2M243 656 aa19.61■□□□□ 0.73
PCDHA12-201ENST00000398631 CNTROBQ8N137 903 aa19.61■□□□□ 0.73
PCDHA12-201ENST00000398631 FSD1Q9BTV5 496 aa19.61■□□□□ 0.73
PCDHA12-201ENST00000398631 NBPF8Q3BBV2 869 aa19.61■□□□□ 0.73
PCDHA12-201ENST00000398631 SLC26A8Q96RN1 970 aa19.61■□□□□ 0.73
PCDHA12-201ENST00000398631 ANKRD30BQ9BXX2 1392 aa19.6■□□□□ 0.73
PCDHA12-201ENST00000398631 KIF6Q6ZMV9 814 aa19.6■□□□□ 0.73
PCDHA12-201ENST00000398631 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
PCDHA12-201ENST00000398631 IPO7O95373 1038 aaKnown RBP19.6■□□□□ 0.73
PCDHA12-201ENST00000398631 HDGFL1Q5TGJ6 251 aa19.6■□□□□ 0.73
PCDHA12-201ENST00000398631 KLHL34Q8N239 644 aa19.6■□□□□ 0.73
PCDHA12-201ENST00000398631 GSE1Q14687 1217 aa19.59■□□□□ 0.73
PCDHA12-201ENST00000398631 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
PCDHA12-201ENST00000398631 RTEL1-TNFRSF6BF6WH68 1400 aa19.59■□□□□ 0.73
PCDHA12-201ENST00000398631 PNISRQ8TF01 805 aaKnown RBP19.59■□□□□ 0.73
PCDHA12-201ENST00000398631 RSPH6AQ9H0K4 717 aa19.59■□□□□ 0.73
PCDHA12-201ENST00000398631 POGZQ7Z3K3 1410 aa19.58■□□□□ 0.73
PCDHA12-201ENST00000398631 PRM3Q9NNZ6 103 aa19.58■□□□□ 0.73
PCDHA12-201ENST00000398631 ZNF530Q6P9A1 599 aaPredicted RBP19.58■□□□□ 0.72
PCDHA12-201ENST00000398631 FAM177BA6PVY3 158 aa19.58■□□□□ 0.72
PCDHA12-201ENST00000398631 PSMA5P28066 241 aa19.58■□□□□ 0.72
PCDHA12-201ENST00000398631 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.72
PCDHA12-201ENST00000398631 CCDC73Q6ZRK6 1079 aa19.57■□□□□ 0.72
PCDHA12-201ENST00000398631 PDE3AQ14432 1141 aa19.57■□□□□ 0.72
PCDHA12-201ENST00000398631 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms