RNA–Protein interactions for RNA: ENST00000398224.3

PDE9A-207, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-207ENST00000398224 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.21
PDE9A-207ENST00000398224 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.21
PDE9A-207ENST00000398224 KIF14Q15058 1648 aa13.71□□□□□ -0.22
PDE9A-207ENST00000398224 KDM5CP41229 1560 aa13.7□□□□□ -0.22
PDE9A-207ENST00000398224 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
PDE9A-207ENST00000398224 SMC4Q9NTJ3 1288 aa13.7□□□□□ -0.22
PDE9A-207ENST00000398224 SHROOM2Q13796 1616 aa13.7□□□□□ -0.22
PDE9A-207ENST00000398224 TNNT3P45378 269 aaPredicted RBP13.69□□□□□ -0.22
PDE9A-207ENST00000398224 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
PDE9A-207ENST00000398224 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
PDE9A-207ENST00000398224 PATL2C9JE40 543 aaKnown RBP13.69□□□□□ -0.22
PDE9A-207ENST00000398224 NOP2P46087 812 aaKnown RBP13.69□□□□□ -0.22
PDE9A-207ENST00000398224 SATB1Q01826 763 aa13.69□□□□□ -0.22
PDE9A-207ENST00000398224 C20orf194Q5TEA3 1177 aa13.69□□□□□ -0.22
PDE9A-207ENST00000398224 EGFL6Q8IUX8 553 aa13.69□□□□□ -0.22
PDE9A-207ENST00000398224 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
PDE9A-207ENST00000398224 PARD3Q8TEW0 1356 aa13.69□□□□□ -0.22
PDE9A-207ENST00000398224 AQRO60306 1485 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDE9A-207ENST00000398224 DENND4BO75064 1496 aaPredicted RBP13.69□□□□□ -0.22
PDE9A-207ENST00000398224 KIF21AQ7Z4S6 1674 aa13.68□□□□□ -0.22
PDE9A-207ENST00000398224 FYCO1Q9BQS8 1478 aa13.68□□□□□ -0.22
PDE9A-207ENST00000398224 KIF1CO43896 1103 aaKnown RBP13.68□□□□□ -0.22
PDE9A-207ENST00000398224 CLSTN1O94985 981 aa13.68□□□□□ -0.22
PDE9A-207ENST00000398224 U2AF2P26368 475 aaKnown RBP eCLIP13.68□□□□□ -0.22
PDE9A-207ENST00000398224 SLC26A8Q96RN1 970 aa13.68□□□□□ -0.22
PDE9A-207ENST00000398224 EPRSP07814 1512 aaKnown RBP13.68□□□□□ -0.22
PDE9A-207ENST00000398224 GTF2A1P52655 376 aaPredicted RBP13.67□□□□□ -0.22
PDE9A-207ENST00000398224 CERS3Q8IU89 383 aa13.67□□□□□ -0.22
PDE9A-207ENST00000398224 KRT222Q8N1A0 295 aa13.67□□□□□ -0.22
PDE9A-207ENST00000398224 BANK1Q8NDB2 785 aa13.67□□□□□ -0.22
PDE9A-207ENST00000398224 CTNNA3Q9UI47 895 aa13.67□□□□□ -0.22
PDE9A-207ENST00000398224 CCDC172P0C7W6 258 aa13.66□□□□□ -0.22
PDE9A-207ENST00000398224 NOLC1Q14978 699 aaKnown RBP eCLIP13.66□□□□□ -0.22
PDE9A-207ENST00000398224 ICE2Q659A1 982 aa13.66□□□□□ -0.22
PDE9A-207ENST00000398224 L3MBTL2Q969R5 705 aa13.66□□□□□ -0.22
PDE9A-207ENST00000398224 C22orf23Q9BZE7 217 aa13.66□□□□□ -0.22
PDE9A-207ENST00000398224 DDX49Q9Y6V7 483 aaKnown RBP13.66□□□□□ -0.22
PDE9A-207ENST00000398224 MBD5Q9P267 1494 aa13.66□□□□□ -0.22
PDE9A-207ENST00000398224 HMGB1P09429 215 aaKnown RBP13.66□□□□□ -0.22
PDE9A-207ENST00000398224 MUM1L1Q5H9M0 696 aa13.66□□□□□ -0.22
PDE9A-207ENST00000398224 RASSF4Q9H2L5 321 aa13.66□□□□□ -0.22
PDE9A-207ENST00000398224 RAI14Q9P0K7 980 aa13.66□□□□□ -0.22
PDE9A-207ENST00000398224 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
PDE9A-207ENST00000398224 NESP48681 1621 aa13.65□□□□□ -0.22
PDE9A-207ENST00000398224 ZSCAN23Q3MJ62 389 aa13.65□□□□□ -0.22
PDE9A-207ENST00000398224 MNS1Q8NEH6 495 aa13.65□□□□□ -0.22
PDE9A-207ENST00000398224 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
PDE9A-207ENST00000398224 CDCA7LQ96GN5 454 aa13.65□□□□□ -0.22
PDE9A-207ENST00000398224 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.65□□□□□ -0.22
PDE9A-207ENST00000398224 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.22
PDE9A-207ENST00000398224 REC8O95072 547 aa13.64□□□□□ -0.23
PDE9A-207ENST00000398224 GUCY2CP25092 1073 aa13.64□□□□□ -0.23
PDE9A-207ENST00000398224 PDE3AQ14432 1141 aa13.64□□□□□ -0.23
PDE9A-207ENST00000398224 PLCD4Q9BRC7 762 aa13.64□□□□□ -0.23
PDE9A-207ENST00000398224 RBSNQ9H1K0 784 aa13.64□□□□□ -0.23
PDE9A-207ENST00000398224 KIF16BQ96L93 1317 aa13.64□□□□□ -0.23
PDE9A-207ENST00000398224 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
PDE9A-207ENST00000398224 PCF11O94913 1555 aaKnown RBP13.64□□□□□ -0.23
PDE9A-207ENST00000398224 GOLGA6L6A8MZA4 724 aa13.63□□□□□ -0.23
PDE9A-207ENST00000398224 TPM3P06753 285 aa13.63□□□□□ -0.23
PDE9A-207ENST00000398224 SIRT1Q96EB6 747 aa13.63□□□□□ -0.23
PDE9A-207ENST00000398224 RBM28Q9NW13 759 aaKnown RBP13.63□□□□□ -0.23
PDE9A-207ENST00000398224 FAM53CQ9NYF3 392 aa13.63□□□□□ -0.23
PDE9A-207ENST00000398224 CCDC9Q9Y3X0 531 aaKnown RBP13.63□□□□□ -0.23
PDE9A-207ENST00000398224 LRSAM1Q6UWE0 723 aa13.63□□□□□ -0.23
PDE9A-207ENST00000398224 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
PDE9A-207ENST00000398224 CADPSQ9ULU8 1353 aa13.62□□□□□ -0.23
PDE9A-207ENST00000398224 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
PDE9A-207ENST00000398224 LOC102724159A0A0B4J2E5 919 aa13.62□□□□□ -0.23
PDE9A-207ENST00000398224 DHX16O60231 1041 aaKnown RBP13.62□□□□□ -0.23
PDE9A-207ENST00000398224 PWP2Q15269 919 aaKnown RBP13.62□□□□□ -0.23
PDE9A-207ENST00000398224 AMER1Q5JTC6 1135 aaPredicted RBP13.62□□□□□ -0.23
PDE9A-207ENST00000398224 USP47Q96K76 1375 aa13.62□□□□□ -0.23
PDE9A-207ENST00000398224 CYP2C19P33261 490 aa13.61□□□□□ -0.23
PDE9A-207ENST00000398224 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
PDE9A-207ENST00000398224 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
PDE9A-207ENST00000398224 DONSONQ9NYP3 566 aa13.61□□□□□ -0.23
PDE9A-207ENST00000398224 KIF27Q86VH2 1401 aa13.61□□□□□ -0.23
PDE9A-207ENST00000398224 RAD51AP2Q09MP3 1159 aa13.6□□□□□ -0.23
PDE9A-207ENST00000398224 DUSP27Q5VZP5 1158 aa13.59□□□□□ -0.23
PDE9A-207ENST00000398224 FAM184AQ8NB25 1140 aa13.59□□□□□ -0.23
PDE9A-207ENST00000398224 RSPH14Q9UHP6 348 aa13.59□□□□□ -0.23
PDE9A-207ENST00000398224 PTPRKQ15262 1439 aa13.59□□□□□ -0.23
PDE9A-207ENST00000398224 IGSF3O75054 1194 aa13.59□□□□□ -0.23
PDE9A-207ENST00000398224 BAG4O95429 457 aaKnown RBP13.59□□□□□ -0.23
PDE9A-207ENST00000398224 GOLGA6L1Q8N7Z2 621 aa13.59□□□□□ -0.23
PDE9A-207ENST00000398224 KIF18AQ8NI77 898 aa13.59□□□□□ -0.23
PDE9A-207ENST00000398224 CLUAP1Q96AJ1 413 aa13.59□□□□□ -0.23
PDE9A-207ENST00000398224 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
PDE9A-207ENST00000398224 CALRP27797 417 aaKnown RBP13.58□□□□□ -0.24
PDE9A-207ENST00000398224 SETQ01105 290 aaPredicted RBP13.58□□□□□ -0.24
PDE9A-207ENST00000398224 NBPF8Q3BBV2 869 aa13.58□□□□□ -0.24
PDE9A-207ENST00000398224 RPAINQ86UA6 219 aa13.58□□□□□ -0.24
PDE9A-207ENST00000398224 P3H3Q8IVL6 736 aa13.58□□□□□ -0.24
PDE9A-207ENST00000398224 MED4Q9NPJ6 270 aa13.58□□□□□ -0.24
PDE9A-207ENST00000398224 ANKRD30BQ9BXX2 1392 aa13.57□□□□□ -0.24
PDE9A-207ENST00000398224 ZNF521Q96K83 1311 aa13.57□□□□□ -0.24
PDE9A-207ENST00000398224 IGHDP01880 384 aa13.57□□□□□ -0.24
PDE9A-207ENST00000398224 CASQ1P31415 396 aa13.57□□□□□ -0.24
PDE9A-207ENST00000398224 NUCB2P80303 420 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms