RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 E9PSI1 815 aa20.55■□□□□ 0.88
CHMP1A-201ENST00000397901 RICTORQ6R327 1708 aa20.55■□□□□ 0.88
CHMP1A-201ENST00000397901 ABCC3O15438 1527 aa20.54■□□□□ 0.88
CHMP1A-201ENST00000397901 RAPGEF3O95398 923 aa20.54■□□□□ 0.88
CHMP1A-201ENST00000397901 DIP2CQ9Y2E4 1556 aa20.54■□□□□ 0.88
CHMP1A-201ENST00000397901 KDM5AP29375 1690 aaKnown RBP20.54■□□□□ 0.88
CHMP1A-201ENST00000397901 CARD14Q9BXL6 1004 aa20.53■□□□□ 0.88
CHMP1A-201ENST00000397901 ADGRF5Q8IZF2 1346 aa20.53■□□□□ 0.88
CHMP1A-201ENST00000397901 IGHDP01880 384 aa20.53■□□□□ 0.88
CHMP1A-201ENST00000397901 RRP9O43818 475 aaKnown RBP20.52■□□□□ 0.88
CHMP1A-201ENST00000397901 GGT6Q6P531 493 aa20.52■□□□□ 0.88
CHMP1A-201ENST00000397901 L1TD1Q5T7N2 865 aaKnown RBP20.51■□□□□ 0.87
CHMP1A-201ENST00000397901 GLI2P10070 1586 aa20.51■□□□□ 0.87
CHMP1A-201ENST00000397901 HSP90AA2PQ14568 343 aaPredicted RBP20.51■□□□□ 0.87
CHMP1A-201ENST00000397901 CFAP65Q6ZU64 1925 aaKnown RBP20.51■□□□□ 0.87
CHMP1A-201ENST00000397901 CANXP27824 592 aaKnown RBP20.5■□□□□ 0.87
CHMP1A-201ENST00000397901 ERVK-7P63135 1459 aa20.5■□□□□ 0.87
CHMP1A-201ENST00000397901 CAMSAP1Q5T5Y3 1602 aa20.5■□□□□ 0.87
CHMP1A-201ENST00000397901 PANK1Q8TE04 598 aa20.49■□□□□ 0.87
CHMP1A-201ENST00000397901 CENPJQ9HC77 1338 aaPredicted RBP20.48■□□□□ 0.87
CHMP1A-201ENST00000397901 COG6Q9Y2V7 657 aa20.48■□□□□ 0.87
CHMP1A-201ENST00000397901 PPLO60437 1756 aa20.48■□□□□ 0.87
CHMP1A-201ENST00000397901 SIGLEC1Q9BZZ2 1709 aa20.47■□□□□ 0.87
CHMP1A-201ENST00000397901 NEUROD2Q15784 382 aa20.47■□□□□ 0.87
CHMP1A-201ENST00000397901 NOS1P29475 1434 aa20.47■□□□□ 0.87
CHMP1A-201ENST00000397901 CYB5RLQ6IPT4 315 aa20.47■□□□□ 0.87
CHMP1A-201ENST00000397901 HSP90AA1P07900 732 aaKnown RBP20.46■□□□□ 0.87
CHMP1A-201ENST00000397901 TNNT2P45379 298 aaPredicted RBP20.46■□□□□ 0.87
CHMP1A-201ENST00000397901 WWC1Q8IX03 1113 aa20.46■□□□□ 0.87
CHMP1A-201ENST00000397901 RIMBP3CA6NJZ7 1639 aa20.46■□□□□ 0.87
CHMP1A-201ENST00000397901 RIMBP3BA6NNM3 1639 aa20.46■□□□□ 0.87
CHMP1A-201ENST00000397901 RIMBP3Q9UFD9 1639 aa20.46■□□□□ 0.87
CHMP1A-201ENST00000397901 CGNL1Q0VF96 1302 aa20.45■□□□□ 0.86
CHMP1A-201ENST00000397901 NAP1L5Q96NT1 182 aaPredicted RBP20.45■□□□□ 0.86
CHMP1A-201ENST00000397901 RRP7AQ9Y3A4 280 aaKnown RBP20.45■□□□□ 0.86
CHMP1A-201ENST00000397901 MYO3AQ8NEV4 1616 aa20.45■□□□□ 0.86
CHMP1A-201ENST00000397901 SETBP1Q9Y6X0 1596 aa20.45■□□□□ 0.86
CHMP1A-201ENST00000397901 CLUAP1Q96AJ1 413 aa20.45■□□□□ 0.86
CHMP1A-201ENST00000397901 PDE3AQ14432 1141 aa20.44■□□□□ 0.86
CHMP1A-201ENST00000397901 PIK3C2BO00750 1634 aa20.44■□□□□ 0.86
CHMP1A-201ENST00000397901 PNNQ9H307 717 aaKnown RBP20.43■□□□□ 0.86
CHMP1A-201ENST00000397901 YEATS2Q9ULM3 1422 aa20.43■□□□□ 0.86
CHMP1A-201ENST00000397901 ZC3H13Q5T200 1668 aaKnown RBP20.43■□□□□ 0.86
CHMP1A-201ENST00000397901 SEC24BO95487 1268 aa20.42■□□□□ 0.86
CHMP1A-201ENST00000397901 USP19O94966 1318 aa20.42■□□□□ 0.86
CHMP1A-201ENST00000397901 POGKQ9P215 609 aa20.42■□□□□ 0.86
CHMP1A-201ENST00000397901 CHGAP10645 457 aaKnown RBP20.41■□□□□ 0.86
CHMP1A-201ENST00000397901 ARHGAP31Q2M1Z3 1444 aa20.41■□□□□ 0.86
CHMP1A-201ENST00000397901 NGEFQ8N5V2 710 aa20.41■□□□□ 0.86
CHMP1A-201ENST00000397901 POLR3AO14802 1390 aaPredicted RBP20.4■□□□□ 0.86
CHMP1A-201ENST00000397901 SLC24A1O60721 1099 aa20.4■□□□□ 0.86
CHMP1A-201ENST00000397901 CLCN1P35523 988 aa20.4■□□□□ 0.86
CHMP1A-201ENST00000397901 MORC1Q86VD1 984 aa20.4■□□□□ 0.86
CHMP1A-201ENST00000397901 RPGRIP1LQ68CZ1 1315 aa20.4■□□□□ 0.86
CHMP1A-201ENST00000397901 DIP2BQ9P265 1576 aa20.39■□□□□ 0.85
CHMP1A-201ENST00000397901 SBNO2Q9Y2G9 1366 aa20.39■□□□□ 0.85
CHMP1A-201ENST00000397901 NSD3Q9BZ95 1437 aa20.39■□□□□ 0.85
CHMP1A-201ENST00000397901 ADGRB1O14514 1584 aa20.38■□□□□ 0.85
CHMP1A-201ENST00000397901 TNNQ9UQP3 1299 aa20.38■□□□□ 0.85
CHMP1A-201ENST00000397901 MAPK8IP3Q9UPT6 1336 aa20.38■□□□□ 0.85
CHMP1A-201ENST00000397901 BCL2L13Q9BXK5 485 aa20.37■□□□□ 0.85
CHMP1A-201ENST00000397901 C14orf93Q9H972 538 aaKnown RBP20.37■□□□□ 0.85
CHMP1A-201ENST00000397901 NINLQ9Y2I6 1382 aa20.37■□□□□ 0.85
CHMP1A-201ENST00000397901 TRAK1Q9UPV9 953 aa20.37■□□□□ 0.85
CHMP1A-201ENST00000397901 SLC12A5Q9H2X9 1139 aa20.36■□□□□ 0.85
CHMP1A-201ENST00000397901 RARSP54136 660 aaKnown RBP20.36■□□□□ 0.85
CHMP1A-201ENST00000397901 TCP11L2Q8N4U5 519 aa20.36■□□□□ 0.85
CHMP1A-201ENST00000397901 VIRMAQ69YN4 1812 aaKnown RBP20.36■□□□□ 0.85
CHMP1A-201ENST00000397901 RUNDC1Q96C34 613 aa20.35■□□□□ 0.85
CHMP1A-201ENST00000397901 PODXL2Q9NZ53 605 aa20.35■□□□□ 0.85
CHMP1A-201ENST00000397901 RLBP1P12271 317 aa20.34■□□□□ 0.85
CHMP1A-201ENST00000397901 NEXMIFQ5QGS0 1516 aa20.34■□□□□ 0.85
CHMP1A-201ENST00000397901 PCDHB15Q9Y5E8 787 aa20.34■□□□□ 0.85
CHMP1A-201ENST00000397901 FAM69CQ0P6D2 419 aa20.33■□□□□ 0.85
CHMP1A-201ENST00000397901 SLKQ9H2G2 1235 aaPredicted RBP20.33■□□□□ 0.84
CHMP1A-201ENST00000397901 SHPRHQ149N8 1683 aa20.32■□□□□ 0.84
CHMP1A-201ENST00000397901 QRICH2Q9H0J4 1663 aa20.31■□□□□ 0.84
CHMP1A-201ENST00000397901 PMFBP1Q8TBY8 1022 aa20.31■□□□□ 0.84
CHMP1A-201ENST00000397901 MTHFSP49914 203 aa20.3■□□□□ 0.84
CHMP1A-201ENST00000397901 BECN1Q14457 450 aa20.3■□□□□ 0.84
CHMP1A-201ENST00000397901 PREX1Q8TCU6 1659 aa20.3■□□□□ 0.84
CHMP1A-201ENST00000397901 TMEM132EQ6IEE7 984 aa20.3■□□□□ 0.84
CHMP1A-201ENST00000397901 NLRP1Q9C000 1473 aa20.29■□□□□ 0.84
CHMP1A-201ENST00000397901 PDZRN3Q9UPQ7 1066 aa20.29■□□□□ 0.84
CHMP1A-201ENST00000397901 TSPOAP1O95153 1857 aa20.29■□□□□ 0.84
CHMP1A-201ENST00000397901 IQSEC2Q5JU85 1478 aa20.28■□□□□ 0.84
CHMP1A-201ENST00000397901 IDI1Q13907 227 aa20.28■□□□□ 0.84
CHMP1A-201ENST00000397901 XRCC6P12956 609 aaKnown RBP eCLIP20.27■□□□□ 0.84
CHMP1A-201ENST00000397901 PHF23Q9BUL5 403 aaPredicted RBP20.27■□□□□ 0.84
CHMP1A-201ENST00000397901 SLC52A1Q9NWF4 448 aa20.27■□□□□ 0.84
CHMP1A-201ENST00000397901 GOLGA6L3A6NEY3 463 aa20.27■□□□□ 0.83
CHMP1A-201ENST00000397901 VGFO15240 615 aaPredicted RBP20.27■□□□□ 0.83
CHMP1A-201ENST00000397901 WDR63Q8IWG1 891 aa20.27■□□□□ 0.83
CHMP1A-201ENST00000397901 REREQ9P2R6 1566 aa20.26■□□□□ 0.83
CHMP1A-201ENST00000397901 MYO5BQ9ULV0 1848 aa20.26■□□□□ 0.83
CHMP1A-201ENST00000397901 ZFYVE9O95405 1425 aa20.26■□□□□ 0.83
CHMP1A-201ENST00000397901 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
CHMP1A-201ENST00000397901 UPF2Q9HAU5 1272 aaKnown RBP20.25■□□□□ 0.83
CHMP1A-201ENST00000397901 TMEM131LA2VDJ0 1609 aa20.25■□□□□ 0.83
CHMP1A-201ENST00000397901 FSD2A1L4K1 749 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms