RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 NBPF8Q3BBV2 869 aa10.82□□□□□ -0.68
LINC00887-201ENST00000397644 EID1Q9Y6B2 187 aa10.82□□□□□ -0.68
LINC00887-201ENST00000397644 TXNDC2Q86VQ3 553 aa10.81□□□□□ -0.68
LINC00887-201ENST00000397644 PLCD3Q8N3E9 789 aa10.81□□□□□ -0.68
LINC00887-201ENST00000397644 SPATA31E1Q6ZUB1 1445 aa10.81□□□□□ -0.68
LINC00887-201ENST00000397644 CHD2O14647 1828 aaKnown RBP10.81□□□□□ -0.68
LINC00887-201ENST00000397644 NWD1Q149M9 1564 aa10.81□□□□□ -0.68
LINC00887-201ENST00000397644 PHF12Q96QT6 1004 aa10.8□□□□□ -0.68
LINC00887-201ENST00000397644 CLTCL1P53675 1640 aa10.8□□□□□ -0.68
LINC00887-201ENST00000397644 ALKQ9UM73 1620 aa10.8□□□□□ -0.68
LINC00887-201ENST00000397644 ADGRF5Q8IZF2 1346 aa10.79□□□□□ -0.68
LINC00887-201ENST00000397644 POTEIP0CG38 1075 aa10.78□□□□□ -0.68
LINC00887-201ENST00000397644 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
LINC00887-201ENST00000397644 CFAP70Q5T0N1 1121 aa10.77□□□□□ -0.69
LINC00887-201ENST00000397644 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
LINC00887-201ENST00000397644 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
LINC00887-201ENST00000397644 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
LINC00887-201ENST00000397644 LTKP29376 864 aa10.76□□□□□ -0.69
LINC00887-201ENST00000397644 PLCB2Q00722 1185 aa10.76□□□□□ -0.69
LINC00887-201ENST00000397644 NBPF1Q3BBV0 1214 aa10.76□□□□□ -0.69
LINC00887-201ENST00000397644 RIMS2Q9UQ26 1411 aa10.75□□□□□ -0.69
LINC00887-201ENST00000397644 DIP2AQ14689 1571 aa10.75□□□□□ -0.69
LINC00887-201ENST00000397644 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
LINC00887-201ENST00000397644 CARD11Q9BXL7 1154 aa10.75□□□□□ -0.69
LINC00887-201ENST00000397644 C14orf93Q9H972 538 aaKnown RBP10.75□□□□□ -0.69
LINC00887-201ENST00000397644 NRXN3Q9Y4C0 1643 aa10.75□□□□□ -0.69
LINC00887-201ENST00000397644 TMEM2Q9UHN6 1383 aa10.75□□□□□ -0.69
LINC00887-201ENST00000397644 PPLO60437 1756 aa10.75□□□□□ -0.69
LINC00887-201ENST00000397644 MED1Q15648 1581 aaPredicted RBP10.74□□□□□ -0.69
LINC00887-201ENST00000397644 ROBO1Q9Y6N7 1651 aa10.74□□□□□ -0.69
LINC00887-201ENST00000397644 UBAP1LF5GYI3 381 aa10.74□□□□□ -0.69
LINC00887-201ENST00000397644 IFT172Q9UG01 1749 aa10.73□□□□□ -0.69
LINC00887-201ENST00000397644 EIF4G2P78344 907 aaKnown RBP eCLIP10.73□□□□□ -0.69
LINC00887-201ENST00000397644 TMEM132EQ6IEE7 984 aa10.73□□□□□ -0.69
LINC00887-201ENST00000397644 DCBLD2Q96PD2 775 aa10.73□□□□□ -0.69
LINC00887-201ENST00000397644 SETD1AO15047 1707 aaKnown RBP10.72□□□□□ -0.69
LINC00887-201ENST00000397644 HIRIP3Q9BW71 556 aaPredicted RBP10.72□□□□□ -0.69
LINC00887-201ENST00000397644 ZFYVE9O95405 1425 aa10.72□□□□□ -0.69
LINC00887-201ENST00000397644 NKTRP30414 1462 aaKnown RBP10.72□□□□□ -0.69
LINC00887-201ENST00000397644 XRN1Q8IZH2 1706 aaKnown RBP10.72□□□□□ -0.69
LINC00887-201ENST00000397644 PHLPP1O60346 1717 aa10.71□□□□□ -0.69
LINC00887-201ENST00000397644 ROCK2O75116 1388 aaKnown RBP10.71□□□□□ -0.69
LINC00887-201ENST00000397644 PRAG1Q86YV5 1406 aa10.71□□□□□ -0.69
LINC00887-201ENST00000397644 SLC26A8Q96RN1 970 aa10.71□□□□□ -0.69
LINC00887-201ENST00000397644 NALCNQ8IZF0 1738 aa10.7□□□□□ -0.7
LINC00887-201ENST00000397644 IFNLR1Q8IU57 520 aaPredicted RBP10.7□□□□□ -0.7
LINC00887-201ENST00000397644 RASEFQ8IZ41 740 aa10.7□□□□□ -0.7
LINC00887-201ENST00000397644 STK26Q9P289 416 aa10.7□□□□□ -0.7
LINC00887-201ENST00000397644 NEXMIFQ5QGS0 1516 aa10.69□□□□□ -0.7
LINC00887-201ENST00000397644 DISP3Q9P2K9 1392 aa10.69□□□□□ -0.7
LINC00887-201ENST00000397644 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
LINC00887-201ENST00000397644 HSPA5P11021 654 aaKnown RBP10.69□□□□□ -0.7
LINC00887-201ENST00000397644 TRAK1Q9UPV9 953 aa10.69□□□□□ -0.7
LINC00887-201ENST00000397644 TBX22Q9Y458 520 aa10.69□□□□□ -0.7
LINC00887-201ENST00000397644 CCDC61Q9Y6R9 512 aa10.69□□□□□ -0.7
LINC00887-201ENST00000397644 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.69□□□□□ -0.7
LINC00887-201ENST00000397644 PIP4K2BP78356 416 aa10.68□□□□□ -0.7
LINC00887-201ENST00000397644 MYOM2P54296 1465 aa10.68□□□□□ -0.7
LINC00887-201ENST00000397644 ST20-MTHFSA0A0A6YYL1 179 aa10.67□□□□□ -0.7
LINC00887-201ENST00000397644 ZBTB47Q9UFB7 747 aaPredicted RBP10.67□□□□□ -0.7
LINC00887-201ENST00000397644 SETBP1Q9Y6X0 1596 aa10.67□□□□□ -0.7
LINC00887-201ENST00000397644 PLEKHG1Q9ULL1 1385 aa10.66□□□□□ -0.7
LINC00887-201ENST00000397644 POGKQ9P215 609 aa10.66□□□□□ -0.7
LINC00887-201ENST00000397644 PIK3C2GO75747 1445 aa10.66□□□□□ -0.7
LINC00887-201ENST00000397644 MS4A3Q96HJ5 214 aa10.65□□□□□ -0.7
LINC00887-201ENST00000397644 NRXN1Q9ULB1 1477 aa10.65□□□□□ -0.7
LINC00887-201ENST00000397644 NUBP1P53384 320 aa10.64□□□□□ -0.71
LINC00887-201ENST00000397644 AMOTL2Q9Y2J4 779 aa10.64□□□□□ -0.71
LINC00887-201ENST00000397644 RALGAPBQ86X10 1494 aa10.63□□□□□ -0.71
LINC00887-201ENST00000397644 TOM1O60784 492 aa10.63□□□□□ -0.71
LINC00887-201ENST00000397644 METP08581 1390 aa10.63□□□□□ -0.71
LINC00887-201ENST00000397644 TMEM94Q12767 1356 aa10.63□□□□□ -0.71
LINC00887-201ENST00000397644 GPRASP1Q5JY77 1395 aa10.63□□□□□ -0.71
LINC00887-201ENST00000397644 USP47Q96K76 1375 aa10.63□□□□□ -0.71
LINC00887-201ENST00000397644 KNDC1Q76NI1 1749 aa10.62□□□□□ -0.71
LINC00887-201ENST00000397644 ADAMTS13Q76LX8 1427 aa10.62□□□□□ -0.71
LINC00887-201ENST00000397644 SAFB2Q14151 953 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC00887-201ENST00000397644 LHX8Q68G74 356 aa10.62□□□□□ -0.71
LINC00887-201ENST00000397644 SIRT1Q96EB6 747 aa10.62□□□□□ -0.71
LINC00887-201ENST00000397644 KIF12Q96FN5 646 aa10.62□□□□□ -0.71
LINC00887-201ENST00000397644 POLR3GLQ9BT43 218 aa10.62□□□□□ -0.71
LINC00887-201ENST00000397644 COL16A1Q07092 1604 aaPredicted RBP10.62□□□□□ -0.71
LINC00887-201ENST00000397644 HSPA1LP34931 641 aa10.61□□□□□ -0.71
LINC00887-201ENST00000397644 WAPLQ7Z5K2 1190 aa10.61□□□□□ -0.71
LINC00887-201ENST00000397644 PRAM1Q96QH2 718 aa10.61□□□□□ -0.71
LINC00887-201ENST00000397644 NHSL1Q5SYE7 1610 aa10.61□□□□□ -0.71
LINC00887-201ENST00000397644 CENPJQ9HC77 1338 aaPredicted RBP10.6□□□□□ -0.71
LINC00887-201ENST00000397644 SHPRHQ149N8 1683 aa10.6□□□□□ -0.71
LINC00887-201ENST00000397644 KCNA6P17658 529 aa10.6□□□□□ -0.71
LINC00887-201ENST00000397644 HAP1P54257 671 aaPredicted RBP10.6□□□□□ -0.71
LINC00887-201ENST00000397644 TMF1P82094 1093 aa10.6□□□□□ -0.71
LINC00887-201ENST00000397644 EIF3AQ14152 1382 aaKnown RBP10.6□□□□□ -0.71
LINC00887-201ENST00000397644 ABCC11Q96J66 1382 aa10.6□□□□□ -0.71
LINC00887-201ENST00000397644 YTHDC2Q9H6S0 1430 aaKnown RBP10.59□□□□□ -0.71
LINC00887-201ENST00000397644 LAMC1P11047 1609 aa10.59□□□□□ -0.71
LINC00887-201ENST00000397644 TRPM1Q7Z4N2 1603 aa10.59□□□□□ -0.71
LINC00887-201ENST00000397644 RBM33Q96EV2 1170 aaKnown RBP10.59□□□□□ -0.71
LINC00887-201ENST00000397644 LRPPRCP42704 1394 aaKnown RBP10.59□□□□□ -0.71
LINC00887-201ENST00000397644 MSH6P52701 1360 aa10.59□□□□□ -0.71
LINC00887-201ENST00000397644 C11orf95C9JLR9 678 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms