RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 KNSTRNQ9Y448 316 aa16.21■□□□□ 0.19
GTF2A2-202ENST00000396060 MYBBP1AQ9BQG0 1328 aaKnown RBP16.21■□□□□ 0.19
GTF2A2-202ENST00000396060 DIP2AQ14689 1571 aa16.21■□□□□ 0.18
GTF2A2-202ENST00000396060 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
GTF2A2-202ENST00000396060 CCDC184Q52MB2 194 aa16.2■□□□□ 0.18
GTF2A2-202ENST00000396060 CPS1P31327 1500 aa16.2■□□□□ 0.18
GTF2A2-202ENST00000396060 ATAD2Q6PL18 1390 aa16.18■□□□□ 0.18
GTF2A2-202ENST00000396060 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
GTF2A2-202ENST00000396060 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
GTF2A2-202ENST00000396060 CARD14Q9BXL6 1004 aa16.17■□□□□ 0.18
GTF2A2-202ENST00000396060 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
GTF2A2-202ENST00000396060 NLRP13Q86W25 1043 aa16.17■□□□□ 0.18
GTF2A2-202ENST00000396060 BCANQ96GW7 911 aa16.17■□□□□ 0.18
GTF2A2-202ENST00000396060 ANKLE2Q86XL3 938 aa16.16■□□□□ 0.18
GTF2A2-202ENST00000396060 SLC12A5Q9H2X9 1139 aa16.16■□□□□ 0.18
GTF2A2-202ENST00000396060 WAPLQ7Z5K2 1190 aa16.15■□□□□ 0.18
GTF2A2-202ENST00000396060 CDK19Q9BWU1 502 aa16.15■□□□□ 0.18
GTF2A2-202ENST00000396060 MINK1Q8N4C8 1332 aaPredicted RBP16.15■□□□□ 0.18
GTF2A2-202ENST00000396060 ANKRD36BQ8N2N9 1353 aa16.15■□□□□ 0.18
GTF2A2-202ENST00000396060 PLEKHH1Q9ULM0 1364 aa16.15■□□□□ 0.18
GTF2A2-202ENST00000396060 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
GTF2A2-202ENST00000396060 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
GTF2A2-202ENST00000396060 PTPRUQ92729 1446 aa16.14■□□□□ 0.17
GTF2A2-202ENST00000396060 PNISRQ8TF01 805 aaKnown RBP16.13■□□□□ 0.17
GTF2A2-202ENST00000396060 USP32Q8NFA0 1604 aa16.13■□□□□ 0.17
GTF2A2-202ENST00000396060 ROBO2Q9HCK4 1378 aa16.12■□□□□ 0.17
GTF2A2-202ENST00000396060 PTCH1Q13635 1447 aa16.12■□□□□ 0.17
GTF2A2-202ENST00000396060 WASLO00401 505 aaPredicted RBP16.12■□□□□ 0.17
GTF2A2-202ENST00000396060 SRPK2P78362 688 aaKnown RBP16.12■□□□□ 0.17
GTF2A2-202ENST00000396060 CC2D1BQ5T0F9 858 aaKnown RBP16.12■□□□□ 0.17
GTF2A2-202ENST00000396060 TMC1Q8TDI8 760 aa16.12■□□□□ 0.17
GTF2A2-202ENST00000396060 SLC26A8Q96RN1 970 aa16.12■□□□□ 0.17
GTF2A2-202ENST00000396060 ADGRB2O60241 1585 aa16.1■□□□□ 0.17
GTF2A2-202ENST00000396060 INSRP06213 1382 aa16.1■□□□□ 0.17
GTF2A2-202ENST00000396060 AMOTL2Q9Y2J4 779 aa16.1■□□□□ 0.17
GTF2A2-202ENST00000396060 NSD2O96028 1365 aa16.09■□□□□ 0.17
GTF2A2-202ENST00000396060 TERF2IPQ9NYB0 399 aa16.09■□□□□ 0.17
GTF2A2-202ENST00000396060 XRN1Q8IZH2 1706 aaKnown RBP16.08■□□□□ 0.17
GTF2A2-202ENST00000396060 NSD3Q9BZ95 1437 aa16.08■□□□□ 0.16
GTF2A2-202ENST00000396060 PPP2R1AP30153 589 aa16.08■□□□□ 0.16
GTF2A2-202ENST00000396060 PHF23Q9BUL5 403 aaPredicted RBP16.08■□□□□ 0.16
GTF2A2-202ENST00000396060 CD163L1Q9NR16 1453 aa16.07■□□□□ 0.16
GTF2A2-202ENST00000396060 CGNL1Q0VF96 1302 aa16.07■□□□□ 0.16
GTF2A2-202ENST00000396060 ATP7BP35670 1465 aa16.06■□□□□ 0.16
GTF2A2-202ENST00000396060 A0A1W2PP64 1363 aa16.06■□□□□ 0.16
GTF2A2-202ENST00000396060 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.05■□□□□ 0.16
GTF2A2-202ENST00000396060 CNGB1Q14028 1251 aaPredicted RBP16.05■□□□□ 0.16
GTF2A2-202ENST00000396060 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
GTF2A2-202ENST00000396060 CABP1Q9NZU7 370 aa16.04■□□□□ 0.16
GTF2A2-202ENST00000396060 NPHP4O75161 1426 aaPredicted RBP16.04■□□□□ 0.16
GTF2A2-202ENST00000396060 HDGFL2Q7Z4V5 671 aaPredicted RBP16.04■□□□□ 0.16
GTF2A2-202ENST00000396060 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
GTF2A2-202ENST00000396060 CHD2O14647 1828 aaKnown RBP16.03■□□□□ 0.16
GTF2A2-202ENST00000396060 CPSF1Q10570 1443 aaKnown RBP16.03■□□□□ 0.16
GTF2A2-202ENST00000396060 NUDT16Q96DE0 195 aaKnown RBP16.03■□□□□ 0.16
GTF2A2-202ENST00000396060 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.16
GTF2A2-202ENST00000396060 PLEKHG3A1L390 1219 aa16■□□□□ 0.15
GTF2A2-202ENST00000396060 ZBED9Q6R2W3 1325 aa16■□□□□ 0.15
GTF2A2-202ENST00000396060 KDM4FA0A1W2PPD8 638 aa16■□□□□ 0.15
GTF2A2-202ENST00000396060 KCNA6P17658 529 aa16■□□□□ 0.15
GTF2A2-202ENST00000396060 MORC1Q86VD1 984 aa16■□□□□ 0.15
GTF2A2-202ENST00000396060 ZNF692Q9BU19 519 aaPredicted RBP16■□□□□ 0.15
GTF2A2-202ENST00000396060 PPIP5K1Q6PFW1 1433 aa15.99■□□□□ 0.15
GTF2A2-202ENST00000396060 PRR36Q9H6K5 1346 aa15.98■□□□□ 0.15
GTF2A2-202ENST00000396060 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
GTF2A2-202ENST00000396060 FYB1O15117 783 aa15.98■□□□□ 0.15
GTF2A2-202ENST00000396060 CDC42BPGQ6DT37 1551 aa15.98■□□□□ 0.15
GTF2A2-202ENST00000396060 EDC4Q6P2E9 1401 aaKnown RBP15.96■□□□□ 0.15
GTF2A2-202ENST00000396060 NCKAP5LQ9HCH0 1330 aa15.96■□□□□ 0.15
GTF2A2-202ENST00000396060 TOPAZ1Q8N9V7 1692 aa15.96■□□□□ 0.15
GTF2A2-202ENST00000396060 ANKARQ7Z5J8 1434 aa15.96■□□□□ 0.14
GTF2A2-202ENST00000396060 NWD1Q149M9 1564 aa15.95■□□□□ 0.14
GTF2A2-202ENST00000396060 ANKRD26Q9UPS8 1709 aa15.95■□□□□ 0.14
GTF2A2-202ENST00000396060 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
GTF2A2-202ENST00000396060 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
GTF2A2-202ENST00000396060 AKAP12Q02952 1782 aa15.93■□□□□ 0.14
GTF2A2-202ENST00000396060 MON2Q7Z3U7 1717 aa15.93■□□□□ 0.14
GTF2A2-202ENST00000396060 ADAMTS8Q9UP79 889 aa15.91■□□□□ 0.14
GTF2A2-202ENST00000396060 KIF20BQ96Q89 1820 aa15.9■□□□□ 0.14
GTF2A2-202ENST00000396060 GGNBP2Q9H3C7 697 aa15.9■□□□□ 0.14
GTF2A2-202ENST00000396060 SSH2Q76I76 1423 aa15.9■□□□□ 0.14
GTF2A2-202ENST00000396060 ADGRL3Q9HAR2 1447 aa15.9■□□□□ 0.14
GTF2A2-202ENST00000396060 ITSN1Q15811 1721 aa15.9■□□□□ 0.14
GTF2A2-202ENST00000396060 FMN2Q9NZ56 1722 aa15.89■□□□□ 0.13
GTF2A2-202ENST00000396060 ACEP12821 1306 aa15.89■□□□□ 0.13
GTF2A2-202ENST00000396060 WDR43Q15061 677 aaKnown RBP eCLIP15.89■□□□□ 0.13
GTF2A2-202ENST00000396060 NKTRP30414 1462 aaKnown RBP15.88■□□□□ 0.13
GTF2A2-202ENST00000396060 MTHFSP49914 203 aa15.88■□□□□ 0.13
GTF2A2-202ENST00000396060 LMTK3Q96Q04 1460 aa15.88■□□□□ 0.13
GTF2A2-202ENST00000396060 NCOA3Q9Y6Q9 1424 aa15.88■□□□□ 0.13
GTF2A2-202ENST00000396060 CFAP53Q96M91 514 aa15.87■□□□□ 0.13
GTF2A2-202ENST00000396060 USP6P35125 1406 aa15.87■□□□□ 0.13
GTF2A2-202ENST00000396060 AATKQ6ZMQ8 1374 aa15.87■□□□□ 0.13
GTF2A2-202ENST00000396060 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
GTF2A2-202ENST00000396060 TTC21BQ7Z4L5 1316 aa15.86■□□□□ 0.13
GTF2A2-202ENST00000396060 PDE3BQ13370 1112 aa15.86■□□□□ 0.13
GTF2A2-202ENST00000396060 NGEFQ8N5V2 710 aa15.86■□□□□ 0.13
GTF2A2-202ENST00000396060 GTF3C3Q9Y5Q9 886 aa15.86■□□□□ 0.13
GTF2A2-202ENST00000396060 NALCNQ8IZF0 1738 aa15.86■□□□□ 0.13
GTF2A2-202ENST00000396060 NRKQ7Z2Y5 1582 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms