RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
SSH2-203ENST00000394848 STK26Q9P289 416 aa17.14■□□□□ 0.33
SSH2-203ENST00000394848 TECPR2O15040 1411 aa17.13■□□□□ 0.33
SSH2-203ENST00000394848 SIRT1Q96EB6 747 aa17.13■□□□□ 0.33
SSH2-203ENST00000394848 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
SSH2-203ENST00000394848 FAM9BQ8IZU0 186 aa17.1■□□□□ 0.33
SSH2-203ENST00000394848 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
SSH2-203ENST00000394848 MYBBP1AQ9BQG0 1328 aaKnown RBP17.09■□□□□ 0.33
SSH2-203ENST00000394848 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
SSH2-203ENST00000394848 SCAF1Q9H7N4 1312 aaKnown RBP17.09■□□□□ 0.33
SSH2-203ENST00000394848 ROBO2Q9HCK4 1378 aa17.09■□□□□ 0.33
SSH2-203ENST00000394848 PTCH1Q13635 1447 aa17.09■□□□□ 0.33
SSH2-203ENST00000394848 FAM135BQ49AJ0 1406 aa17.09■□□□□ 0.33
SSH2-203ENST00000394848 CC2D1BQ5T0F9 858 aaKnown RBP17.09■□□□□ 0.33
SSH2-203ENST00000394848 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
SSH2-203ENST00000394848 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
SSH2-203ENST00000394848 NWD1Q149M9 1564 aa17.08■□□□□ 0.32
SSH2-203ENST00000394848 CHD2O14647 1828 aaKnown RBP17.08■□□□□ 0.32
SSH2-203ENST00000394848 XRN1Q8IZH2 1706 aaKnown RBP17.07■□□□□ 0.32
SSH2-203ENST00000394848 PRAM1Q96QH2 718 aa17.07■□□□□ 0.32
SSH2-203ENST00000394848 EVC2Q86UK5 1308 aa17.07■□□□□ 0.32
SSH2-203ENST00000394848 PARD3Q8TEW0 1356 aa17.07■□□□□ 0.32
SSH2-203ENST00000394848 SAFB2Q14151 953 aaKnown RBP eCLIP17.07■□□□□ 0.32
SSH2-203ENST00000394848 WAPLQ7Z5K2 1190 aa17.07■□□□□ 0.32
SSH2-203ENST00000394848 PUS7Q96PZ0 661 aaKnown RBP17.07■□□□□ 0.32
SSH2-203ENST00000394848 POGKQ9P215 609 aa17.07■□□□□ 0.32
SSH2-203ENST00000394848 CPS1P31327 1500 aa17.06■□□□□ 0.32
SSH2-203ENST00000394848 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
SSH2-203ENST00000394848 GTF3C3Q9Y5Q9 886 aa17.06■□□□□ 0.32
SSH2-203ENST00000394848 NKTRP30414 1462 aaKnown RBP17.06■□□□□ 0.32
SSH2-203ENST00000394848 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
SSH2-203ENST00000394848 NLRP13Q86W25 1043 aa17.04■□□□□ 0.32
SSH2-203ENST00000394848 PROSER2Q86WR7 435 aaPredicted RBP17.04■□□□□ 0.32
SSH2-203ENST00000394848 BRD4O60885 1362 aaPredicted RBP17.04■□□□□ 0.32
SSH2-203ENST00000394848 PLEKHH1Q9ULM0 1364 aa17.04■□□□□ 0.32
SSH2-203ENST00000394848 KNDC1Q76NI1 1749 aa17.04■□□□□ 0.32
SSH2-203ENST00000394848 QRICH2Q9H0J4 1663 aa17.03■□□□□ 0.32
SSH2-203ENST00000394848 PNISRQ8TF01 805 aaKnown RBP17.02■□□□□ 0.32
SSH2-203ENST00000394848 CARD14Q9BXL6 1004 aa17.02■□□□□ 0.31
SSH2-203ENST00000394848 SLC12A5Q9H2X9 1139 aa17.02■□□□□ 0.31
SSH2-203ENST00000394848 ARHGEF28Q8N1W1 1705 aaKnown RBP17.01■□□□□ 0.31
SSH2-203ENST00000394848 STRCP1A6NGW2 1772 aa17.01■□□□□ 0.31
SSH2-203ENST00000394848 NCOA3Q9Y6Q9 1424 aa17.01■□□□□ 0.31
SSH2-203ENST00000394848 MINK1Q8N4C8 1332 aaPredicted RBP17■□□□□ 0.31
SSH2-203ENST00000394848 CABP2Q9NPB3 220 aa17■□□□□ 0.31
SSH2-203ENST00000394848 TMEM94Q12767 1356 aa17■□□□□ 0.31
SSH2-203ENST00000394848 RBM33Q96EV2 1170 aaKnown RBP17■□□□□ 0.31
SSH2-203ENST00000394848 NPC1L1Q9UHC9 1359 aa16.99■□□□□ 0.31
SSH2-203ENST00000394848 MYOM1P52179 1685 aa16.99■□□□□ 0.31
SSH2-203ENST00000394848 SRPK2P78362 688 aaKnown RBP16.99■□□□□ 0.31
SSH2-203ENST00000394848 LTBP4Q8N2S1 1624 aa16.99■□□□□ 0.31
SSH2-203ENST00000394848 LRRC7Q96NW7 1537 aa16.98■□□□□ 0.31
SSH2-203ENST00000394848 TULP4Q9NRJ4 1543 aa16.97■□□□□ 0.31
SSH2-203ENST00000394848 C19orf44Q9H6X5 657 aa16.96■□□□□ 0.31
SSH2-203ENST00000394848 ADGRL3Q9HAR2 1447 aa16.95■□□□□ 0.3
SSH2-203ENST00000394848 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
SSH2-203ENST00000394848 PPP2R1AP30153 589 aa16.94■□□□□ 0.3
SSH2-203ENST00000394848 C14orf37Q86TY3 774 aa16.94■□□□□ 0.3
SSH2-203ENST00000394848 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.94■□□□□ 0.3
SSH2-203ENST00000394848 WASLO00401 505 aaPredicted RBP16.93■□□□□ 0.3
SSH2-203ENST00000394848 ATAD2Q6PL18 1390 aa16.92■□□□□ 0.3
SSH2-203ENST00000394848 NINLQ9Y2I6 1382 aa16.92■□□□□ 0.3
SSH2-203ENST00000394848 ANKRD36BQ8N2N9 1353 aa16.91■□□□□ 0.3
SSH2-203ENST00000394848 ADGRB2O60241 1585 aa16.91■□□□□ 0.3
SSH2-203ENST00000394848 NSD3Q9BZ95 1437 aa16.91■□□□□ 0.3
SSH2-203ENST00000394848 ZBED9Q6R2W3 1325 aa16.91■□□□□ 0.3
SSH2-203ENST00000394848 MSH6P52701 1360 aa16.9■□□□□ 0.3
SSH2-203ENST00000394848 DCCP43146 1447 aa16.9■□□□□ 0.3
SSH2-203ENST00000394848 TERF2IPQ9NYB0 399 aa16.89■□□□□ 0.29
SSH2-203ENST00000394848 CGNL1Q0VF96 1302 aa16.89■□□□□ 0.29
SSH2-203ENST00000394848 ATF3P18847 181 aa16.88■□□□□ 0.29
SSH2-203ENST00000394848 CADPS2Q86UW7 1296 aa16.88■□□□□ 0.29
SSH2-203ENST00000394848 NALCNQ8IZF0 1738 aa16.88■□□□□ 0.29
SSH2-203ENST00000394848 CDC42BPGQ6DT37 1551 aa16.87■□□□□ 0.29
SSH2-203ENST00000394848 MORC1Q86VD1 984 aa16.87■□□□□ 0.29
SSH2-203ENST00000394848 CABP1Q9NZU7 370 aa16.87■□□□□ 0.29
SSH2-203ENST00000394848 XIRP1Q702N8 1843 aaKnown RBP16.86■□□□□ 0.29
SSH2-203ENST00000394848 HDGFL2Q7Z4V5 671 aaPredicted RBP16.85■□□□□ 0.29
SSH2-203ENST00000394848 CERKQ8TCT0 537 aa16.85■□□□□ 0.29
SSH2-203ENST00000394848 A0A1W2PP64 1363 aa16.84■□□□□ 0.29
SSH2-203ENST00000394848 PRR36Q9H6K5 1346 aa16.84■□□□□ 0.29
SSH2-203ENST00000394848 NUDT16Q96DE0 195 aaKnown RBP16.84■□□□□ 0.29
SSH2-203ENST00000394848 CCDC61Q9Y6R9 512 aa16.84■□□□□ 0.29
SSH2-203ENST00000394848 IQSEC2Q5JU85 1478 aa16.83■□□□□ 0.29
SSH2-203ENST00000394848 ANKARQ7Z5J8 1434 aa16.83■□□□□ 0.29
SSH2-203ENST00000394848 NUTM2FA1L443 756 aa16.82■□□□□ 0.28
SSH2-203ENST00000394848 MST1RQ04912 1400 aa16.82■□□□□ 0.28
SSH2-203ENST00000394848 NSD2O96028 1365 aa16.82■□□□□ 0.28
SSH2-203ENST00000394848 INSRP06213 1382 aa16.82■□□□□ 0.28
SSH2-203ENST00000394848 WDR43Q15061 677 aaKnown RBP eCLIP16.82■□□□□ 0.28
SSH2-203ENST00000394848 SLAIN2Q9P270 581 aa16.82■□□□□ 0.28
SSH2-203ENST00000394848 ADAMTS8Q9UP79 889 aa16.82■□□□□ 0.28
SSH2-203ENST00000394848 ATP7BP35670 1465 aa16.81■□□□□ 0.28
SSH2-203ENST00000394848 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
SSH2-203ENST00000394848 C1orf167Q5SNV9 1468 aa16.8■□□□□ 0.28
SSH2-203ENST00000394848 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
SSH2-203ENST00000394848 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
SSH2-203ENST00000394848 FMN2Q9NZ56 1722 aa16.8■□□□□ 0.28
SSH2-203ENST00000394848 PLEKHG3A1L390 1219 aa16.79■□□□□ 0.28
SSH2-203ENST00000394848 USP32Q8NFA0 1604 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms